RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 ATP7BP35670 1465 aa23.75■■□□□ 1.39
RAB3D-202ENST00000589655 FAM98CQ17RN3 349 aaKnown RBP23.75■■□□□ 1.39
RAB3D-202ENST00000589655 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
RAB3D-202ENST00000589655 NGDNQ8NEJ9 315 aaKnown RBP23.73■■□□□ 1.39
RAB3D-202ENST00000589655 HRCP23327 699 aa23.72■■□□□ 1.39
RAB3D-202ENST00000589655 SF3B2Q13435 895 aaKnown RBP23.71■■□□□ 1.39
RAB3D-202ENST00000589655 ITSN1Q15811 1721 aa23.7■■□□□ 1.39
RAB3D-202ENST00000589655 SPATA31A5Q5VU36 1347 aa23.7■■□□□ 1.38
RAB3D-202ENST00000589655 SPATA31A7Q8IWB4 1347 aa23.7■■□□□ 1.38
RAB3D-202ENST00000589655 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
RAB3D-202ENST00000589655 NUDT16Q96DE0 195 aaKnown RBP23.7■■□□□ 1.38
RAB3D-202ENST00000589655 A0A0G2JS52 829 aa23.69■■□□□ 1.38
RAB3D-202ENST00000589655 MYT1Q01538 1121 aa23.69■■□□□ 1.38
RAB3D-202ENST00000589655 THSD7AQ9UPZ6 1657 aa23.69■■□□□ 1.38
RAB3D-202ENST00000589655 FAM182BQ5T319 152 aa23.67■■□□□ 1.38
RAB3D-202ENST00000589655 TOPAZ1Q8N9V7 1692 aa23.67■■□□□ 1.38
RAB3D-202ENST00000589655 PHRF1Q9P1Y6 1649 aaKnown RBP23.66■■□□□ 1.38
RAB3D-202ENST00000589655 PRDM11Q9NQV5 511 aa23.66■■□□□ 1.38
RAB3D-202ENST00000589655 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
RAB3D-202ENST00000589655 CDK19Q9BWU1 502 aa23.65■■□□□ 1.38
RAB3D-202ENST00000589655 POLR3AO14802 1390 aaPredicted RBP23.64■■□□□ 1.37
RAB3D-202ENST00000589655 CHRNA2Q15822 529 aa23.63■■□□□ 1.37
RAB3D-202ENST00000589655 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
RAB3D-202ENST00000589655 BAG6P46379 1132 aa23.62■■□□□ 1.37
RAB3D-202ENST00000589655 NUTM2GQ5VZR2 741 aa23.62■■□□□ 1.37
RAB3D-202ENST00000589655 LRP5O75197 1615 aa23.62■■□□□ 1.37
RAB3D-202ENST00000589655 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
RAB3D-202ENST00000589655 SPATA31A1Q5TZJ5 1347 aa23.61■■□□□ 1.37
RAB3D-202ENST00000589655 ACEP12821 1306 aa23.6■■□□□ 1.37
RAB3D-202ENST00000589655 TNS1Q9HBL0 1735 aaKnown RBP23.6■■□□□ 1.37
RAB3D-202ENST00000589655 PSDA5PKW4 1024 aaPredicted RBP23.6■■□□□ 1.37
RAB3D-202ENST00000589655 EN1Q05925 392 aaPredicted RBP23.6■■□□□ 1.37
RAB3D-202ENST00000589655 NBPF1Q3BBV0 1214 aa23.6■■□□□ 1.37
RAB3D-202ENST00000589655 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
RAB3D-202ENST00000589655 PLEKHG3A1L390 1219 aa23.59■■□□□ 1.37
RAB3D-202ENST00000589655 ZC3H6P61129 1189 aaKnown RBP23.59■■□□□ 1.37
RAB3D-202ENST00000589655 CCDC61Q9Y6R9 512 aa23.59■■□□□ 1.37
RAB3D-202ENST00000589655 NRKQ7Z2Y5 1582 aa23.57■■□□□ 1.36
RAB3D-202ENST00000589655 STRN4Q9NRL3 753 aa23.57■■□□□ 1.36
RAB3D-202ENST00000589655 DISP2A7MBM2 1401 aa23.57■■□□□ 1.36
RAB3D-202ENST00000589655 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
RAB3D-202ENST00000589655 LMO7Q8WWI1 1683 aa23.54■■□□□ 1.36
RAB3D-202ENST00000589655 SSH2Q76I76 1423 aa23.53■■□□□ 1.36
RAB3D-202ENST00000589655 USP19O94966 1318 aa23.53■■□□□ 1.36
RAB3D-202ENST00000589655 ABTB2Q8N961 1025 aa23.51■■□□□ 1.35
RAB3D-202ENST00000589655 USP35Q9P2H5 1018 aa23.51■■□□□ 1.35
RAB3D-202ENST00000589655 CPDO75976 1380 aa23.51■■□□□ 1.35
RAB3D-202ENST00000589655 EZH2Q15910 746 aaKnown RBP23.5■■□□□ 1.35
RAB3D-202ENST00000589655 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
RAB3D-202ENST00000589655 TRIM37O94972 964 aa23.49■■□□□ 1.35
RAB3D-202ENST00000589655 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
RAB3D-202ENST00000589655 BARGINQ6ZT62 677 aa23.49■■□□□ 1.35
RAB3D-202ENST00000589655 CAMKK2Q96RR4 588 aa23.49■■□□□ 1.35
RAB3D-202ENST00000589655 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
RAB3D-202ENST00000589655 FAM196AQ6ZSG2 479 aa23.48■■□□□ 1.35
RAB3D-202ENST00000589655 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
RAB3D-202ENST00000589655 CENPJQ9HC77 1338 aaPredicted RBP23.48■■□□□ 1.35
RAB3D-202ENST00000589655 EVA1CP58658 441 aa23.46■■□□□ 1.35
RAB3D-202ENST00000589655 SRPK2P78362 688 aaKnown RBP23.46■■□□□ 1.35
RAB3D-202ENST00000589655 QRICH2Q9H0J4 1663 aa23.46■■□□□ 1.35
RAB3D-202ENST00000589655 GCP02774 474 aa23.45■■□□□ 1.34
RAB3D-202ENST00000589655 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
RAB3D-202ENST00000589655 NLRP13Q86W25 1043 aa23.43■■□□□ 1.34
RAB3D-202ENST00000589655 COL5A2P05997 1499 aaPredicted RBP23.43■■□□□ 1.34
RAB3D-202ENST00000589655 USP6P35125 1406 aa23.42■■□□□ 1.34
RAB3D-202ENST00000589655 APBA3O96018 575 aa23.41■■□□□ 1.34
RAB3D-202ENST00000589655 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
RAB3D-202ENST00000589655 RREB1Q92766 1687 aa23.41■■□□□ 1.34
RAB3D-202ENST00000589655 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
RAB3D-202ENST00000589655 PDE3BQ13370 1112 aa23.4■■□□□ 1.34
RAB3D-202ENST00000589655 L3MBTL2Q969R5 705 aa23.4■■□□□ 1.34
RAB3D-202ENST00000589655 PARP4Q9UKK3 1724 aaKnown RBP23.39■■□□□ 1.34
RAB3D-202ENST00000589655 SLIT3O75094 1523 aa23.39■■□□□ 1.34
RAB3D-202ENST00000589655 PARD3Q8TEW0 1356 aa23.39■■□□□ 1.33
RAB3D-202ENST00000589655 THRAP3Q9Y2W1 955 aaKnown RBP23.38■■□□□ 1.33
RAB3D-202ENST00000589655 NUP188Q5SRE5 1749 aa23.38■■□□□ 1.33
RAB3D-202ENST00000589655 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
RAB3D-202ENST00000589655 CRB1P82279 1406 aa23.36■■□□□ 1.33
RAB3D-202ENST00000589655 COL18A1P39060 1754 aa23.36■■□□□ 1.33
RAB3D-202ENST00000589655 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
RAB3D-202ENST00000589655 NLRP6P59044 892 aa23.35■■□□□ 1.33
RAB3D-202ENST00000589655 PEAK1Q9H792 1746 aa23.35■■□□□ 1.33
RAB3D-202ENST00000589655 AATKQ6ZMQ8 1374 aa23.35■■□□□ 1.33
RAB3D-202ENST00000589655 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
RAB3D-202ENST00000589655 ZBTB7CA1YPR0 619 aa23.32■■□□□ 1.32
RAB3D-202ENST00000589655 LRRC37A3O60309 1634 aa23.32■■□□□ 1.32
RAB3D-202ENST00000589655 AXIN2Q9Y2T1 843 aa23.31■■□□□ 1.32
RAB3D-202ENST00000589655 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
RAB3D-202ENST00000589655 AKAP12Q02952 1782 aa23.28■■□□□ 1.32
RAB3D-202ENST00000589655 SBF2Q86WG5 1849 aa23.28■■□□□ 1.32
RAB3D-202ENST00000589655 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
RAB3D-202ENST00000589655 OVOS2A0A0J9YW53 1432 aa23.27■■□□□ 1.32
RAB3D-202ENST00000589655 CPSF1Q10570 1443 aaKnown RBP23.27■■□□□ 1.32
RAB3D-202ENST00000589655 OVOS2Q6IE36 1432 aa23.27■■□□□ 1.32
RAB3D-202ENST00000589655 WNK3Q9BYP7 1800 aa23.27■■□□□ 1.32
RAB3D-202ENST00000589655 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
RAB3D-202ENST00000589655 PTF1AQ7RTS3 328 aa23.26■■□□□ 1.31
RAB3D-202ENST00000589655 ARHGEF25Q86VW2 580 aa23.26■■□□□ 1.31
RAB3D-202ENST00000589655 RGPD5Q99666 1765 aa23.25■■□□□ 1.31
RAB3D-202ENST00000589655 TOM1L2Q6ZVM7 507 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms