RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
MBD1-218ENST00000589541 ATP7BP35670 1465 aa17.17■□□□□ 0.34
MBD1-218ENST00000589541 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
MBD1-218ENST00000589541 BRWD3Q6RI45 1802 aa17.16■□□□□ 0.34
MBD1-218ENST00000589541 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
MBD1-218ENST00000589541 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
MBD1-218ENST00000589541 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
MBD1-218ENST00000589541 DEFB132Q7Z7B7 95 aa17.14■□□□□ 0.33
MBD1-218ENST00000589541 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
MBD1-218ENST00000589541 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
MBD1-218ENST00000589541 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
MBD1-218ENST00000589541 COL14A1Q05707 1796 aaKnown RBP17.12■□□□□ 0.33
MBD1-218ENST00000589541 ITSN1Q15811 1721 aa17.11■□□□□ 0.33
MBD1-218ENST00000589541 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
MBD1-218ENST00000589541 CCDC61Q9Y6R9 512 aa17.1■□□□□ 0.33
MBD1-218ENST00000589541 ACEP12821 1306 aa17.1■□□□□ 0.33
MBD1-218ENST00000589541 SPATA31A5Q5VU36 1347 aa17.1■□□□□ 0.33
MBD1-218ENST00000589541 SPATA31A7Q8IWB4 1347 aa17.1■□□□□ 0.33
MBD1-218ENST00000589541 KIAA0232Q92628 1395 aa17.1■□□□□ 0.33
MBD1-218ENST00000589541 CRYBG1Q9Y4K1 1723 aa17.1■□□□□ 0.33
MBD1-218ENST00000589541 CHRNA2Q15822 529 aa17.09■□□□□ 0.33
MBD1-218ENST00000589541 NBPF8Q3BBV2 869 aa17.09■□□□□ 0.33
MBD1-218ENST00000589541 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
MBD1-218ENST00000589541 KIAA1210Q9ULL0 1709 aa17.09■□□□□ 0.33
MBD1-218ENST00000589541 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.32
MBD1-218ENST00000589541 PLEKHG3A1L390 1219 aa17.07■□□□□ 0.32
MBD1-218ENST00000589541 FAM182BQ5T319 152 aa17.07■□□□□ 0.32
MBD1-218ENST00000589541 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
MBD1-218ENST00000589541 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
MBD1-218ENST00000589541 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
MBD1-218ENST00000589541 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
MBD1-218ENST00000589541 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
MBD1-218ENST00000589541 PHRF1Q9P1Y6 1649 aaKnown RBP17.04■□□□□ 0.32
MBD1-218ENST00000589541 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
MBD1-218ENST00000589541 BAG6P46379 1132 aa17.04■□□□□ 0.32
MBD1-218ENST00000589541 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
MBD1-218ENST00000589541 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
MBD1-218ENST00000589541 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
MBD1-218ENST00000589541 USP35Q9P2H5 1018 aa17.02■□□□□ 0.32
MBD1-218ENST00000589541 THSD7AQ9UPZ6 1657 aa17.01■□□□□ 0.31
MBD1-218ENST00000589541 EVA1CP58658 441 aa17.01■□□□□ 0.31
MBD1-218ENST00000589541 USP19O94966 1318 aa16.99■□□□□ 0.31
MBD1-218ENST00000589541 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
MBD1-218ENST00000589541 SSH2Q76I76 1423 aa16.99■□□□□ 0.31
MBD1-218ENST00000589541 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
MBD1-218ENST00000589541 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
MBD1-218ENST00000589541 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
MBD1-218ENST00000589541 CABP1Q9NZU7 370 aa16.99■□□□□ 0.31
MBD1-218ENST00000589541 PSDA5PKW4 1024 aaPredicted RBP16.98■□□□□ 0.31
MBD1-218ENST00000589541 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
MBD1-218ENST00000589541 CPDO75976 1380 aa16.98■□□□□ 0.31
MBD1-218ENST00000589541 QRICH2Q9H0J4 1663 aa16.97■□□□□ 0.31
MBD1-218ENST00000589541 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
MBD1-218ENST00000589541 GCP02774 474 aa16.97■□□□□ 0.31
MBD1-218ENST00000589541 NEUROD1Q13562 356 aa16.97■□□□□ 0.31
MBD1-218ENST00000589541 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.3
MBD1-218ENST00000589541 ZBTB7CA1YPR0 619 aa16.95■□□□□ 0.3
MBD1-218ENST00000589541 TRIM37O94972 964 aa16.95■□□□□ 0.3
MBD1-218ENST00000589541 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
MBD1-218ENST00000589541 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
MBD1-218ENST00000589541 USP6P35125 1406 aa16.95■□□□□ 0.3
MBD1-218ENST00000589541 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
MBD1-218ENST00000589541 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
MBD1-218ENST00000589541 NLRP6P59044 892 aa16.94■□□□□ 0.3
MBD1-218ENST00000589541 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
MBD1-218ENST00000589541 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
MBD1-218ENST00000589541 LMO7Q8WWI1 1683 aa16.94■□□□□ 0.3
MBD1-218ENST00000589541 ROCK2O75116 1388 aaKnown RBP16.93■□□□□ 0.3
MBD1-218ENST00000589541 DISP2A7MBM2 1401 aa16.93■□□□□ 0.3
MBD1-218ENST00000589541 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
MBD1-218ENST00000589541 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
MBD1-218ENST00000589541 TNS1Q9HBL0 1735 aaKnown RBP16.91■□□□□ 0.3
MBD1-218ENST00000589541 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
MBD1-218ENST00000589541 COL5A2P05997 1499 aaPredicted RBP16.91■□□□□ 0.3
MBD1-218ENST00000589541 APBA3O96018 575 aa16.9■□□□□ 0.3
MBD1-218ENST00000589541 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
MBD1-218ENST00000589541 THRAP3Q9Y2W1 955 aaKnown RBP16.9■□□□□ 0.3
MBD1-218ENST00000589541 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.29
MBD1-218ENST00000589541 LRP5O75197 1615 aa16.88■□□□□ 0.29
MBD1-218ENST00000589541 SLIT3O75094 1523 aa16.88■□□□□ 0.29
MBD1-218ENST00000589541 CRB1P82279 1406 aa16.87■□□□□ 0.29
MBD1-218ENST00000589541 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
MBD1-218ENST00000589541 SOX12O15370 315 aa16.86■□□□□ 0.29
MBD1-218ENST00000589541 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
MBD1-218ENST00000589541 TTC21BQ7Z4L5 1316 aa16.86■□□□□ 0.29
MBD1-218ENST00000589541 TOM1L2Q6ZVM7 507 aa16.85■□□□□ 0.29
MBD1-218ENST00000589541 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
MBD1-218ENST00000589541 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
MBD1-218ENST00000589541 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.28
MBD1-218ENST00000589541 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
MBD1-218ENST00000589541 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
MBD1-218ENST00000589541 WDR17Q8IZU2 1322 aa16.82■□□□□ 0.28
MBD1-218ENST00000589541 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
MBD1-218ENST00000589541 ARHGEF25Q86VW2 580 aa16.82■□□□□ 0.28
MBD1-218ENST00000589541 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
MBD1-218ENST00000589541 DDB1Q16531 1140 aa16.81■□□□□ 0.28
MBD1-218ENST00000589541 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
MBD1-218ENST00000589541 OVOS2A0A0G2JMS6 1433 aa16.8■□□□□ 0.28
MBD1-218ENST00000589541 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
MBD1-218ENST00000589541 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms