RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 ONECUT3O60422 494 aaPredicted RBP34.96■■■■□ 3.19
CIRBP-223ENST00000589266 TMF1P82094 1093 aa34.96■■■■□ 3.19
CIRBP-223ENST00000589266 CCDC9Q9Y3X0 531 aaKnown RBP34.96■■■■□ 3.19
CIRBP-223ENST00000589266 SAFB2Q14151 953 aaKnown RBP eCLIP34.94■■■■□ 3.18
CIRBP-223ENST00000589266 KRT27Q7Z3Y8 459 aa34.94■■■■□ 3.18
CIRBP-223ENST00000589266 CABLES1Q8TDN4 633 aa34.94■■■■□ 3.18
CIRBP-223ENST00000589266 TNS3Q68CZ2 1445 aa34.94■■■■□ 3.18
CIRBP-223ENST00000589266 ZNF316A6NFI3 1004 aaPredicted RBP34.93■■■■□ 3.18
CIRBP-223ENST00000589266 PHF8Q9UPP1 1060 aa34.93■■■■□ 3.18
CIRBP-223ENST00000589266 CDCA8Q53HL2 280 aa34.92■■■■□ 3.18
CIRBP-223ENST00000589266 PUS7Q96PZ0 661 aaKnown RBP34.92■■■■□ 3.18
CIRBP-223ENST00000589266 EVC2Q86UK5 1308 aa34.91■■■■□ 3.18
CIRBP-223ENST00000589266 MINK1Q8N4C8 1332 aaPredicted RBP34.91■■■■□ 3.18
CIRBP-223ENST00000589266 NWD2Q9ULI1 1742 aa34.9■■■■□ 3.18
CIRBP-223ENST00000589266 PLEKHG5O94827 1062 aa34.9■■■■□ 3.18
CIRBP-223ENST00000589266 LRP5O75197 1615 aa34.89■■■■□ 3.18
CIRBP-223ENST00000589266 LMOD2Q6P5Q4 547 aa34.88■■■■□ 3.17
CIRBP-223ENST00000589266 RGPD8O14715 1765 aaPredicted RBP34.87■■■■□ 3.17
CIRBP-223ENST00000589266 TULP4Q9NRJ4 1543 aa34.87■■■■□ 3.17
CIRBP-223ENST00000589266 PLCH1Q4KWH8 1693 aa34.87■■■■□ 3.17
CIRBP-223ENST00000589266 SBNO1A3KN83 1393 aa34.87■■■■□ 3.17
CIRBP-223ENST00000589266 BAG6P46379 1132 aa34.86■■■■□ 3.17
CIRBP-223ENST00000589266 ARHGEF10O15013 1369 aa34.85■■■■□ 3.17
CIRBP-223ENST00000589266 WASLO00401 505 aaPredicted RBP34.84■■■■□ 3.17
CIRBP-223ENST00000589266 A0A0G2JS52 829 aa34.83■■■■□ 3.17
CIRBP-223ENST00000589266 MYT1Q01538 1121 aa34.83■■■■□ 3.17
CIRBP-223ENST00000589266 FAM83GA6ND36 823 aa34.82■■■■□ 3.16
CIRBP-223ENST00000589266 PSDA5PKW4 1024 aaPredicted RBP34.81■■■■□ 3.16
CIRBP-223ENST00000589266 CCDC7Q96M83 1385 aa34.8■■■■□ 3.16
CIRBP-223ENST00000589266 C11orf95C9JLR9 678 aaPredicted RBP34.8■■■■□ 3.16
CIRBP-223ENST00000589266 CDK19Q9BWU1 502 aa34.79■■■■□ 3.16
CIRBP-223ENST00000589266 KIF7Q2M1P5 1343 aa34.79■■■■□ 3.16
CIRBP-223ENST00000589266 ABCA3Q99758 1704 aa34.78■■■■□ 3.16
CIRBP-223ENST00000589266 WASHC2AQ641Q2 1341 aa34.77■■■■□ 3.16
CIRBP-223ENST00000589266 FAM98CQ17RN3 349 aaKnown RBP34.76■■■■□ 3.16
CIRBP-223ENST00000589266 SRPK2P78362 688 aaKnown RBP34.74■■■■□ 3.15
CIRBP-223ENST00000589266 ANKARQ7Z5J8 1434 aa34.73■■■■□ 3.15
CIRBP-223ENST00000589266 PMFBP1Q8TBY8 1022 aa34.72■■■■□ 3.15
CIRBP-223ENST00000589266 BTG4Q9NY30 223 aa34.72■■■■□ 3.15
CIRBP-223ENST00000589266 CABP2Q9NPB3 220 aa34.7■■■■□ 3.15
CIRBP-223ENST00000589266 NINLQ9Y2I6 1382 aa34.7■■■■□ 3.15
CIRBP-223ENST00000589266 EN1Q05925 392 aaPredicted RBP34.69■■■■□ 3.14
CIRBP-223ENST00000589266 NRAPQ86VF7 1730 aa34.68■■■■□ 3.14
CIRBP-223ENST00000589266 ATP7BP35670 1465 aa34.67■■■■□ 3.14
CIRBP-223ENST00000589266 NUDT16Q96DE0 195 aaKnown RBP34.66■■■■□ 3.14
CIRBP-223ENST00000589266 CCDC61Q9Y6R9 512 aa34.65■■■■□ 3.14
CIRBP-223ENST00000589266 RGPD1P0DJD0 1748 aa34.64■■■■□ 3.14
CIRBP-223ENST00000589266 COL14A1Q05707 1796 aaKnown RBP34.62■■■■□ 3.13
CIRBP-223ENST00000589266 PRR36Q9H6K5 1346 aa34.62■■■■□ 3.13
CIRBP-223ENST00000589266 ITSN1Q15811 1721 aa34.62■■■■□ 3.13
CIRBP-223ENST00000589266 R3HDM1Q15032 1099 aaKnown RBP34.61■■■■□ 3.13
CIRBP-223ENST00000589266 FAM182BQ5T319 152 aa34.61■■■■□ 3.13
CIRBP-223ENST00000589266 POLR3GLQ9BT43 218 aa34.61■■■■□ 3.13
CIRBP-223ENST00000589266 TOPAZ1Q8N9V7 1692 aa34.6■■■■□ 3.13
CIRBP-223ENST00000589266 SPATA31A5Q5VU36 1347 aa34.6■■■■□ 3.13
CIRBP-223ENST00000589266 SPATA31A7Q8IWB4 1347 aa34.6■■■■□ 3.13
CIRBP-223ENST00000589266 TRPM3Q9HCF6 1732 aaPredicted RBP34.59■■■■□ 3.13
CIRBP-223ENST00000589266 MYOM1P52179 1685 aa34.59■■■■□ 3.13
CIRBP-223ENST00000589266 DISP2A7MBM2 1401 aa34.56■■■■□ 3.12
CIRBP-223ENST00000589266 ALS2Q96Q42 1657 aa34.56■■■■□ 3.12
CIRBP-223ENST00000589266 PPIP5K1Q6PFW1 1433 aa34.55■■■■□ 3.12
CIRBP-223ENST00000589266 PLEKHG3A1L390 1219 aa34.55■■■■□ 3.12
CIRBP-223ENST00000589266 TMC1Q8TDI8 760 aa34.53■■■■□ 3.12
CIRBP-223ENST00000589266 PRDM11Q9NQV5 511 aa34.52■■■■□ 3.12
CIRBP-223ENST00000589266 CABP1Q9NZU7 370 aa34.52■■■■□ 3.12
CIRBP-223ENST00000589266 EZH2Q15910 746 aaKnown RBP34.51■■■■□ 3.12
CIRBP-223ENST00000589266 SLC12A5Q9H2X9 1139 aa34.51■■■■□ 3.12
CIRBP-223ENST00000589266 THSD7AQ9UPZ6 1657 aa34.5■■■■□ 3.11
CIRBP-223ENST00000589266 NGDNQ8NEJ9 315 aaKnown RBP34.49■■■■□ 3.11
CIRBP-223ENST00000589266 TERF2IPQ9NYB0 399 aa34.49■■■■□ 3.11
CIRBP-223ENST00000589266 ANKRD36BQ8N2N9 1353 aa34.49■■■■□ 3.11
CIRBP-223ENST00000589266 TNS1Q9HBL0 1735 aaKnown RBP34.48■■■■□ 3.11
CIRBP-223ENST00000589266 PAK3O75914 559 aaPredicted RBP34.48■■■■□ 3.11
CIRBP-223ENST00000589266 DDX10Q13206 875 aaKnown RBP34.47■■■■□ 3.11
CIRBP-223ENST00000589266 FAM196AQ6ZSG2 479 aa34.47■■■■□ 3.11
CIRBP-223ENST00000589266 CAMKK2Q96RR4 588 aa34.46■■■■□ 3.11
CIRBP-223ENST00000589266 POLR3AO14802 1390 aaPredicted RBP34.46■■■■□ 3.11
CIRBP-223ENST00000589266 TRIM37O94972 964 aa34.45■■■■□ 3.11
CIRBP-223ENST00000589266 ZNF692Q9BU19 519 aaPredicted RBP34.45■■■■□ 3.11
CIRBP-223ENST00000589266 SPATA31A1Q5TZJ5 1347 aa34.45■■■■□ 3.11
CIRBP-223ENST00000589266 CPSF1Q10570 1443 aaKnown RBP34.45■■■■□ 3.11
CIRBP-223ENST00000589266 CD163L1Q9NR16 1453 aa34.45■■■■□ 3.1
CIRBP-223ENST00000589266 HDGFL2Q7Z4V5 671 aaPredicted RBP34.44■■■■□ 3.1
CIRBP-223ENST00000589266 PANK3Q9H999 370 aa34.44■■■■□ 3.1
CIRBP-223ENST00000589266 CRYBG1Q9Y4K1 1723 aa34.43■■■■□ 3.1
CIRBP-223ENST00000589266 AKAP12Q02952 1782 aa34.41■■■■□ 3.1
CIRBP-223ENST00000589266 A0A1W2PP64 1363 aa34.4■■■■□ 3.1
CIRBP-223ENST00000589266 ACEP12821 1306 aa34.4■■■■□ 3.1
CIRBP-223ENST00000589266 APBA3O96018 575 aa34.4■■■■□ 3.1
CIRBP-223ENST00000589266 PARD3Q8TEW0 1356 aa34.39■■■■□ 3.1
CIRBP-223ENST00000589266 KIAA0232Q92628 1395 aa34.39■■■■□ 3.1
CIRBP-223ENST00000589266 STRN4Q9NRL3 753 aa34.39■■■■□ 3.1
CIRBP-223ENST00000589266 BRD4O60885 1362 aaPredicted RBP34.37■■■■□ 3.09
CIRBP-223ENST00000589266 CHRNA2Q15822 529 aa34.37■■■■□ 3.09
CIRBP-223ENST00000589266 MON2Q7Z3U7 1717 aa34.35■■■■□ 3.09
CIRBP-223ENST00000589266 PER1O15534 1290 aaPredicted RBP34.34■■■■□ 3.09
CIRBP-223ENST00000589266 KTN1Q86UP2 1357 aaKnown RBP34.34■■■■□ 3.09
CIRBP-223ENST00000589266 USP6P35125 1406 aa34.32■■■■□ 3.08
CIRBP-223ENST00000589266 EDC4Q6P2E9 1401 aaKnown RBP34.32■■■■□ 3.08
CIRBP-223ENST00000589266 PDE3BQ13370 1112 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms