RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	PAK3	O75914	559 aa	Predicted RBP	28.27	■■■□□ 2.12
SEPT9-223	ENST00000589140	QRICH2	Q9H0J4	1663 aa		28.26	■■■□□ 2.12
SEPT9-223	ENST00000589140	POLR3A	O14802	1390 aa	Predicted RBP	28.25	■■■□□ 2.11
SEPT9-223	ENST00000589140	FAM83G	A6ND36	823 aa		28.25	■■■□□ 2.11
SEPT9-223	ENST00000589140	VPS72	Q15906	364 aa		28.25	■■■□□ 2.11
SEPT9-223	ENST00000589140	PLEKHG3	A1L390	1219 aa		28.24	■■■□□ 2.11
SEPT9-223	ENST00000589140	EP400	Q96L91	3159 aa		28.23	■■■□□ 2.11
SEPT9-223	ENST00000589140	ACE	P12821	1306 aa		28.22	■■■□□ 2.11
SEPT9-223	ENST00000589140	COL14A1	Q05707	1796 aa	Known RBP	28.22	■■■□□ 2.11
SEPT9-223	ENST00000589140	NRAP	Q86VF7	1730 aa		28.22	■■■□□ 2.11
SEPT9-223	ENST00000589140	NBPF8	Q3BBV2	869 aa		28.21	■■■□□ 2.11
SEPT9-223	ENST00000589140	SRPK2	P78362	688 aa	Known RBP	28.2	■■■□□ 2.1
SEPT9-223	ENST00000589140	BRWD3	Q6RI45	1802 aa		28.18	■■■□□ 2.1
SEPT9-223	ENST00000589140	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.18	■■■□□ 2.1
SEPT9-223	ENST00000589140	CABP2	Q9NPB3	220 aa		28.17	■■■□□ 2.1
SEPT9-223	ENST00000589140	BTG4	Q9NY30	223 aa		28.17	■■■□□ 2.1
SEPT9-223	ENST00000589140	CCDC9	Q9Y3X0	531 aa	Known RBP	28.17	■■■□□ 2.1
SEPT9-223	ENST00000589140	PPIP5K1	Q6PFW1	1433 aa		28.17	■■■□□ 2.1
SEPT9-223	ENST00000589140	ROCK2	O75116	1388 aa	Known RBP	28.16	■■■□□ 2.1
SEPT9-223	ENST00000589140	ONECUT3	O60422	494 aa	Predicted RBP	28.14	■■■□□ 2.1
SEPT9-223	ENST00000589140	SEPT12	Q8IYM1	358 aa		28.13	■■■□□ 2.09
SEPT9-223	ENST00000589140	PRDM11	Q9NQV5	511 aa		28.12	■■■□□ 2.09
SEPT9-223	ENST00000589140	NUTM2G	Q5VZR2	741 aa		28.11	■■■□□ 2.09
SEPT9-223	ENST00000589140	CCDC125	Q86Z20	511 aa		28.1	■■■□□ 2.09
SEPT9-223	ENST00000589140	KIAA0232	Q92628	1395 aa		28.1	■■■□□ 2.09
SEPT9-223	ENST00000589140	ABTB2	Q8N961	1025 aa		28.09	■■■□□ 2.09
SEPT9-223	ENST00000589140	EVC2	Q86UK5	1308 aa		28.09	■■■□□ 2.09
SEPT9-223	ENST00000589140	TRIM26	Q12899	539 aa	Predicted RBP	28.08	■■■□□ 2.09
SEPT9-223	ENST00000589140	BRD4	O60885	1362 aa	Predicted RBP	28.08	■■■□□ 2.09
SEPT9-223	ENST00000589140	CABP1	Q9NZU7	370 aa		28.07	■■■□□ 2.08
SEPT9-223	ENST00000589140	NRK	Q7Z2Y5	1582 aa		28.06	■■■□□ 2.08
SEPT9-223	ENST00000589140	USP6	P35125	1406 aa		28.04	■■■□□ 2.08
SEPT9-223	ENST00000589140	USP19	O94966	1318 aa		28.04	■■■□□ 2.08
SEPT9-223	ENST00000589140	SPATA31A5	Q5VU36	1347 aa		28.04	■■■□□ 2.08
SEPT9-223	ENST00000589140	SPATA31A7	Q8IWB4	1347 aa		28.04	■■■□□ 2.08
SEPT9-223	ENST00000589140	ZC3H6	P61129	1189 aa	Known RBP	28.04	■■■□□ 2.08
SEPT9-223	ENST00000589140	TONSL	Q96HA7	1378 aa		28.03	■■■□□ 2.08
SEPT9-223	ENST00000589140	CHRNA2	Q15822	529 aa		28.03	■■■□□ 2.08
SEPT9-223	ENST00000589140	FAM98C	Q17RN3	349 aa	Known RBP	28.03	■■■□□ 2.08
SEPT9-223	ENST00000589140	KRT27	Q7Z3Y8	459 aa		28.02	■■■□□ 2.08
SEPT9-223	ENST00000589140	NLRP13	Q86W25	1043 aa		28.02	■■■□□ 2.08
SEPT9-223	ENST00000589140	BLM	P54132	1417 aa	Predicted RBP	28.01	■■■□□ 2.07
SEPT9-223	ENST00000589140		A0A0G2JS52	829 aa		28	■■■□□ 2.07
SEPT9-223	ENST00000589140	MYT1	Q01538	1121 aa		28	■■■□□ 2.07
SEPT9-223	ENST00000589140	CPD	O75976	1380 aa		27.99	■■■□□ 2.07
SEPT9-223	ENST00000589140	SSH2	Q76I76	1423 aa		27.99	■■■□□ 2.07
SEPT9-223	ENST00000589140	SBNO2	Q9Y2G9	1366 aa		27.99	■■■□□ 2.07
SEPT9-223	ENST00000589140	CARD11	Q9BXL7	1154 aa		27.98	■■■□□ 2.07
SEPT9-223	ENST00000589140	THSD7A	Q9UPZ6	1657 aa		27.97	■■■□□ 2.07
SEPT9-223	ENST00000589140	AKAP12	Q02952	1782 aa		27.97	■■■□□ 2.07
SEPT9-223	ENST00000589140	LMO7	Q8WWI1	1683 aa		27.97	■■■□□ 2.07
SEPT9-223	ENST00000589140	SPATA31A1	Q5TZJ5	1347 aa		27.96	■■■□□ 2.07
SEPT9-223	ENST00000589140	GC	P02774	474 aa		27.96	■■■□□ 2.07
SEPT9-223	ENST00000589140	STRN4	Q9NRL3	753 aa		27.96	■■■□□ 2.07
SEPT9-223	ENST00000589140	CAMTA1	Q9Y6Y1	1673 aa		27.95	■■■□□ 2.07
SEPT9-223	ENST00000589140	PIK3C2A	O00443	1686 aa		27.94	■■■□□ 2.06
SEPT9-223	ENST00000589140	ZNF692	Q9BU19	519 aa	Predicted RBP	27.94	■■■□□ 2.06
SEPT9-223	ENST00000589140	NLRP6	P59044	892 aa		27.93	■■■□□ 2.06
SEPT9-223	ENST00000589140	SLIT3	O75094	1523 aa		27.92	■■■□□ 2.06
SEPT9-223	ENST00000589140	EVA1C	P58658	441 aa		27.91	■■■□□ 2.06
SEPT9-223	ENST00000589140	SF3B2	Q13435	895 aa	Known RBP	27.9	■■■□□ 2.06
SEPT9-223	ENST00000589140	CPSF1	Q10570	1443 aa	Known RBP	27.9	■■■□□ 2.06
SEPT9-223	ENST00000589140	TTC21B	Q7Z4L5	1316 aa		27.89	■■■□□ 2.05
SEPT9-223	ENST00000589140	DEFB132	Q7Z7B7	95 aa		27.87	■■■□□ 2.05
SEPT9-223	ENST00000589140	ZRANB1	Q9UGI0	708 aa		27.87	■■■□□ 2.05
SEPT9-223	ENST00000589140	MON2	Q7Z3U7	1717 aa		27.87	■■■□□ 2.05
SEPT9-223	ENST00000589140	LARP1	Q6PKG0	1096 aa	Known RBP	27.86	■■■□□ 2.05
SEPT9-223	ENST00000589140	TTC21A	Q8NDW8	1320 aa		27.86	■■■□□ 2.05
SEPT9-223	ENST00000589140	COL5A2	P05997	1499 aa	Predicted RBP	27.85	■■■□□ 2.05
SEPT9-223	ENST00000589140	USP35	Q9P2H5	1018 aa		27.85	■■■□□ 2.05
SEPT9-223	ENST00000589140	KTN1	Q86UP2	1357 aa	Known RBP	27.85	■■■□□ 2.05
SEPT9-223	ENST00000589140	BARGIN	Q6ZT62	677 aa		27.84	■■■□□ 2.05
SEPT9-223	ENST00000589140	AATK	Q6ZMQ8	1374 aa		27.84	■■■□□ 2.05
SEPT9-223	ENST00000589140	RGPD1	P0DJD0	1748 aa		27.83	■■■□□ 2.05
SEPT9-223	ENST00000589140	COL18A1	P39060	1754 aa		27.82	■■■□□ 2.04
SEPT9-223	ENST00000589140	FAM182B	Q5T319	152 aa		27.82	■■■□□ 2.04
SEPT9-223	ENST00000589140	ZBTB7C	A1YPR0	619 aa		27.81	■■■□□ 2.04
SEPT9-223	ENST00000589140	TCP11L2	Q8N4U5	519 aa		27.81	■■■□□ 2.04
SEPT9-223	ENST00000589140	CD163L1	Q9NR16	1453 aa		27.79	■■■□□ 2.04
SEPT9-223	ENST00000589140	KCNH5	Q8NCM2	988 aa		27.79	■■■□□ 2.04
SEPT9-223	ENST00000589140	THRAP3	Q9Y2W1	955 aa	Known RBP	27.79	■■■□□ 2.04
SEPT9-223	ENST00000589140	SRCAP	Q6ZRS2	3230 aa		27.79	■■■□□ 2.04
SEPT9-223	ENST00000589140	BAG6	P46379	1132 aa		27.78	■■■□□ 2.04
SEPT9-223	ENST00000589140	PUS7	Q96PZ0	661 aa	Known RBP	27.78	■■■□□ 2.04
SEPT9-223	ENST00000589140	CRB1	P82279	1406 aa		27.77	■■■□□ 2.04
SEPT9-223	ENST00000589140	TNS1	Q9HBL0	1735 aa	Known RBP	27.76	■■■□□ 2.03
SEPT9-223	ENST00000589140	ARHGEF25	Q86VW2	580 aa		27.76	■■■□□ 2.03
SEPT9-223	ENST00000589140	TMC1	Q8TDI8	760 aa		27.76	■■■□□ 2.03
SEPT9-223	ENST00000589140	PARP4	Q9UKK3	1724 aa	Known RBP	27.75	■■■□□ 2.03
SEPT9-223	ENST00000589140	FAM196A	Q6ZSG2	479 aa		27.75	■■■□□ 2.03
SEPT9-223	ENST00000589140	NFAT5	O94916	1531 aa		27.75	■■■□□ 2.03
SEPT9-223	ENST00000589140	USP54	Q70EL1	1684 aa		27.75	■■■□□ 2.03
SEPT9-223	ENST00000589140	RGPD5	Q99666	1765 aa		27.74	■■■□□ 2.03
SEPT9-223	ENST00000589140	ST20-MTHFS	A0A0A6YYL1	179 aa		27.74	■■■□□ 2.03
SEPT9-223	ENST00000589140	PDE3B	Q13370	1112 aa		27.74	■■■□□ 2.03
SEPT9-223	ENST00000589140	TESK2	Q96S53	571 aa		27.74	■■■□□ 2.03
SEPT9-223	ENST00000589140	SLC12A5	Q9H2X9	1139 aa		27.74	■■■□□ 2.03
SEPT9-223	ENST00000589140	USP31	Q70CQ4	1352 aa		27.73	■■■□□ 2.03
SEPT9-223	ENST00000589140	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.73	■■■□□ 2.03
SEPT9-223	ENST00000589140	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms