RNA–Protein interactions for RNA: ENST00000589073.1

PDE4A-206, Transcript of phosphodiesterase 4A, humanhuman

TSL 5

Gene PDE4A, Length 1,703 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-206ENST00000589073 PPP2R1AP30153 589 aa26.59■■□□□ 1.85
PDE4A-206ENST00000589073 NLRP13Q86W25 1043 aa26.59■■□□□ 1.85
PDE4A-206ENST00000589073 MRS2Q9HD23 443 aa26.59■■□□□ 1.85
PDE4A-206ENST00000589073 TTC21BQ7Z4L5 1316 aa26.59■■□□□ 1.85
PDE4A-206ENST00000589073 SSH2Q76I76 1423 aa26.59■■□□□ 1.85
PDE4A-206ENST00000589073 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
PDE4A-206ENST00000589073 LTBP4Q8N2S1 1624 aa26.58■■□□□ 1.85
PDE4A-206ENST00000589073 NME9Q86XW9 330 aa26.56■■□□□ 1.84
PDE4A-206ENST00000589073 ANKRD26Q9UPS8 1709 aa26.56■■□□□ 1.84
PDE4A-206ENST00000589073 BRD4O60885 1362 aaPredicted RBP26.56■■□□□ 1.84
PDE4A-206ENST00000589073 TNNT2P45379 298 aaPredicted RBP26.53■■□□□ 1.84
PDE4A-206ENST00000589073 ZRANB1Q9UGI0 708 aa26.53■■□□□ 1.84
PDE4A-206ENST00000589073 TTC21AQ8NDW8 1320 aa26.52■■□□□ 1.84
PDE4A-206ENST00000589073 KIF1AQ12756 1690 aa26.51■■□□□ 1.83
PDE4A-206ENST00000589073 FOXO3O43524 673 aa26.51■■□□□ 1.83
PDE4A-206ENST00000589073 PSME1Q06323 249 aa26.51■■□□□ 1.83
PDE4A-206ENST00000589073 SLAIN2Q9P270 581 aa26.49■■□□□ 1.83
PDE4A-206ENST00000589073 COG3Q96JB2 828 aa26.48■■□□□ 1.83
PDE4A-206ENST00000589073 PAK3O75914 559 aaPredicted RBP26.45■■□□□ 1.82
PDE4A-206ENST00000589073 PNISRQ8TF01 805 aaKnown RBP26.44■■□□□ 1.82
PDE4A-206ENST00000589073 YTHDC1Q96MU7 727 aaKnown RBP26.44■■□□□ 1.82
PDE4A-206ENST00000589073 PIK3C2AO00443 1686 aa26.44■■□□□ 1.82
PDE4A-206ENST00000589073 OVOS2A0A0J9YW53 1432 aa26.43■■□□□ 1.82
PDE4A-206ENST00000589073 OVOS2Q6IE36 1432 aa26.43■■□□□ 1.82
PDE4A-206ENST00000589073 XPCQ01831 940 aaPredicted RBP26.43■■□□□ 1.82
PDE4A-206ENST00000589073 BRINP3Q76B58 766 aa26.43■■□□□ 1.82
PDE4A-206ENST00000589073 KRT28Q7Z3Y7 464 aa26.43■■□□□ 1.82
PDE4A-206ENST00000589073 FAM9BQ8IZU0 186 aa26.42■■□□□ 1.82
PDE4A-206ENST00000589073 USP31Q70CQ4 1352 aa26.42■■□□□ 1.82
PDE4A-206ENST00000589073 MTHFSP49914 203 aa26.42■■□□□ 1.82
PDE4A-206ENST00000589073 FBLN1P23142 703 aa26.41■■□□□ 1.82
PDE4A-206ENST00000589073 ABTB2Q8N961 1025 aa26.4■■□□□ 1.82
PDE4A-206ENST00000589073 DDX17Q92841 729 aaKnown RBP26.4■■□□□ 1.82
PDE4A-206ENST00000589073 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.82
PDE4A-206ENST00000589073 NLRP6P59044 892 aa26.39■■□□□ 1.81
PDE4A-206ENST00000589073 NPHP3Q7Z494 1330 aa26.38■■□□□ 1.81
PDE4A-206ENST00000589073 NUTM2GQ5VZR2 741 aa26.38■■□□□ 1.81
PDE4A-206ENST00000589073 AATKQ6ZMQ8 1374 aa26.37■■□□□ 1.81
PDE4A-206ENST00000589073 MAP2P11137 1827 aaKnown RBP26.37■■□□□ 1.81
PDE4A-206ENST00000589073 POLKQ9UBT6 870 aa26.36■■□□□ 1.81
PDE4A-206ENST00000589073 USP54Q70EL1 1684 aa26.35■■□□□ 1.81
PDE4A-206ENST00000589073 MARF1Q9Y4F3 1742 aaKnown RBP26.35■■□□□ 1.81
PDE4A-206ENST00000589073 PXDNQ92626 1479 aa26.32■■□□□ 1.8
PDE4A-206ENST00000589073 SBNO1A3KN83 1393 aa26.32■■□□□ 1.8
PDE4A-206ENST00000589073 RRS1Q15050 365 aaKnown RBP26.31■■□□□ 1.8
PDE4A-206ENST00000589073 CFAP53Q96M91 514 aa26.31■■□□□ 1.8
PDE4A-206ENST00000589073 EMILIN1Q9Y6C2 1016 aa26.31■■□□□ 1.8
PDE4A-206ENST00000589073 ALS2Q96Q42 1657 aa26.3■■□□□ 1.8
PDE4A-206ENST00000589073 SOX12O15370 315 aa26.29■■□□□ 1.8
PDE4A-206ENST00000589073 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
PDE4A-206ENST00000589073 CENPBP07199 599 aaPredicted RBP26.28■■□□□ 1.8
PDE4A-206ENST00000589073 SMG6Q86US8 1419 aaKnown RBP26.28■■□□□ 1.8
PDE4A-206ENST00000589073 PNPLA6Q8IY17 1366 aa26.28■■□□□ 1.8
PDE4A-206ENST00000589073 PPM1GO15355 546 aaPredicted RBP26.28■■□□□ 1.8
PDE4A-206ENST00000589073 SOS2Q07890 1332 aaPredicted RBP26.27■■□□□ 1.8
PDE4A-206ENST00000589073 INSRP06213 1382 aa26.26■■□□□ 1.79
PDE4A-206ENST00000589073 WDR43Q15061 677 aaKnown RBP eCLIP26.26■■□□□ 1.79
PDE4A-206ENST00000589073 ADAMTS8Q9UP79 889 aa26.26■■□□□ 1.79
PDE4A-206ENST00000589073 NHSL1Q5SYE7 1610 aa26.25■■□□□ 1.79
PDE4A-206ENST00000589073 COL3A1P02461 1466 aaPredicted RBP26.25■■□□□ 1.79
PDE4A-206ENST00000589073 SPATA31A3Q5VYP0 1347 aa26.25■■□□□ 1.79
PDE4A-206ENST00000589073 TNS3Q68CZ2 1445 aa26.25■■□□□ 1.79
PDE4A-206ENST00000589073 SHPRHQ149N8 1683 aa26.25■■□□□ 1.79
PDE4A-206ENST00000589073 ROBO1Q9Y6N7 1651 aa26.24■■□□□ 1.79
PDE4A-206ENST00000589073 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
PDE4A-206ENST00000589073 MAP3K19Q56UN5 1328 aa26.22■■□□□ 1.79
PDE4A-206ENST00000589073 TOM1O60784 492 aa26.22■■□□□ 1.79
PDE4A-206ENST00000589073 USP19O94966 1318 aa26.22■■□□□ 1.79
PDE4A-206ENST00000589073 KCNH5Q8NCM2 988 aa26.21■■□□□ 1.79
PDE4A-206ENST00000589073 HNRNPUQ00839 825 aaKnown RBP eCLIP26.2■■□□□ 1.79
PDE4A-206ENST00000589073 SLIT3O75094 1523 aa26.2■■□□□ 1.78
PDE4A-206ENST00000589073 NFAT5O94916 1531 aa26.2■■□□□ 1.78
PDE4A-206ENST00000589073 PEAK1Q9H792 1746 aa26.2■■□□□ 1.78
PDE4A-206ENST00000589073 IQSEC2Q5JU85 1478 aa26.2■■□□□ 1.78
PDE4A-206ENST00000589073 DIAPH1O60610 1272 aaKnown RBP26.19■■□□□ 1.78
PDE4A-206ENST00000589073 ARHGEF10O15013 1369 aa26.19■■□□□ 1.78
PDE4A-206ENST00000589073 PLEKHG5O94827 1062 aa26.19■■□□□ 1.78
PDE4A-206ENST00000589073 GCP02774 474 aa26.19■■□□□ 1.78
PDE4A-206ENST00000589073 MED1Q15648 1581 aaPredicted RBP26.18■■□□□ 1.78
PDE4A-206ENST00000589073 CERKQ8TCT0 537 aa26.17■■□□□ 1.78
PDE4A-206ENST00000589073 NUDCQ9Y266 331 aa26.17■■□□□ 1.78
PDE4A-206ENST00000589073 BLMP54132 1417 aaPredicted RBP26.16■■□□□ 1.78
PDE4A-206ENST00000589073 UBAP1LF5GYI3 381 aa26.16■■□□□ 1.78
PDE4A-206ENST00000589073 AMPHP49418 695 aa26.15■■□□□ 1.78
PDE4A-206ENST00000589073 HSP90AB2PQ58FF8 381 aa26.15■■□□□ 1.78
PDE4A-206ENST00000589073 AHDC1Q5TGY3 1603 aaPredicted RBP26.15■■□□□ 1.78
PDE4A-206ENST00000589073 IL13P35225 146 aa26.14■■□□□ 1.78
PDE4A-206ENST00000589073 FLT4P35916 1363 aa26.14■■□□□ 1.78
PDE4A-206ENST00000589073 LTN1O94822 1766 aa26.14■■□□□ 1.77
PDE4A-206ENST00000589073 U2SURPO15042 1029 aaKnown RBP26.14■■□□□ 1.77
PDE4A-206ENST00000589073 KIF24Q5T7B8 1368 aa26.13■■□□□ 1.77
PDE4A-206ENST00000589073 U2AF1L5P0DN76 240 aaPredicted RBP26.13■■□□□ 1.77
PDE4A-206ENST00000589073 PIP4K2BP78356 416 aa26.13■■□□□ 1.77
PDE4A-206ENST00000589073 U2AF1Q01081 240 aaKnown RBP eCLIP26.13■■□□□ 1.77
PDE4A-206ENST00000589073 CABLES1Q8TDN4 633 aa26.12■■□□□ 1.77
PDE4A-206ENST00000589073 HOXC9P31274 260 aa26.11■■□□□ 1.77
PDE4A-206ENST00000589073 ARHGEF25Q86VW2 580 aa26.11■■□□□ 1.77
PDE4A-206ENST00000589073 CRYBG1Q9Y4K1 1723 aa26.11■■□□□ 1.77
PDE4A-206ENST00000589073 PHRF1Q9P1Y6 1649 aaKnown RBP26.1■■□□□ 1.77
PDE4A-206ENST00000589073 SENP3-EIF4A1A0A087X0R7 540 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms