RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 GLI3P10071 1580 aa23■■□□□ 1.27
TMEM259-206ENST00000589055 PAK3O75914 559 aaPredicted RBP22.99■■□□□ 1.27
TMEM259-206ENST00000589055 UNC5CLQ8IV45 518 aa22.99■■□□□ 1.27
TMEM259-206ENST00000589055 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
TMEM259-206ENST00000589055 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
TMEM259-206ENST00000589055 NBPF8Q3BBV2 869 aa22.96■■□□□ 1.27
TMEM259-206ENST00000589055 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
TMEM259-206ENST00000589055 CABP2Q9NPB3 220 aa22.96■■□□□ 1.27
TMEM259-206ENST00000589055 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.26
TMEM259-206ENST00000589055 ROCK2O75116 1388 aaKnown RBP22.95■■□□□ 1.26
TMEM259-206ENST00000589055 ACEP12821 1306 aa22.95■■□□□ 1.26
TMEM259-206ENST00000589055 SRPK2P78362 688 aaKnown RBP22.95■■□□□ 1.26
TMEM259-206ENST00000589055 NWD2Q9ULI1 1742 aa22.95■■□□□ 1.26
TMEM259-206ENST00000589055 FAM83GA6ND36 823 aa22.94■■□□□ 1.26
TMEM259-206ENST00000589055 CCDC61Q9Y6R9 512 aa22.94■■□□□ 1.26
TMEM259-206ENST00000589055 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
TMEM259-206ENST00000589055 NUTM2GQ5VZR2 741 aa22.93■■□□□ 1.26
TMEM259-206ENST00000589055 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
TMEM259-206ENST00000589055 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
TMEM259-206ENST00000589055 PHRF1Q9P1Y6 1649 aaKnown RBP22.92■■□□□ 1.26
TMEM259-206ENST00000589055 PLEKHG3A1L390 1219 aa22.91■■□□□ 1.26
TMEM259-206ENST00000589055 COL14A1Q05707 1796 aaKnown RBP22.9■■□□□ 1.26
TMEM259-206ENST00000589055 VPS72Q15906 364 aa22.88■■□□□ 1.25
TMEM259-206ENST00000589055 BTG4Q9NY30 223 aa22.88■■□□□ 1.25
TMEM259-206ENST00000589055 CCDC9Q9Y3X0 531 aaKnown RBP22.88■■□□□ 1.25
TMEM259-206ENST00000589055 BRWD3Q6RI45 1802 aa22.87■■□□□ 1.25
TMEM259-206ENST00000589055 DEFB132Q7Z7B7 95 aa22.86■■□□□ 1.25
TMEM259-206ENST00000589055 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
TMEM259-206ENST00000589055 SF3B2Q13435 895 aaKnown RBP22.85■■□□□ 1.25
TMEM259-206ENST00000589055 KIAA0232Q92628 1395 aa22.85■■□□□ 1.25
TMEM259-206ENST00000589055 NRKQ7Z2Y5 1582 aa22.84■■□□□ 1.25
TMEM259-206ENST00000589055 PRDM11Q9NQV5 511 aa22.84■■□□□ 1.25
TMEM259-206ENST00000589055 CABP1Q9NZU7 370 aa22.84■■□□□ 1.25
TMEM259-206ENST00000589055 CHRNA2Q15822 529 aa22.83■■□□□ 1.25
TMEM259-206ENST00000589055 ZC3H6P61129 1189 aaKnown RBP22.82■■□□□ 1.24
TMEM259-206ENST00000589055 SEPT12Q8IYM1 358 aa22.82■■□□□ 1.24
TMEM259-206ENST00000589055 EVC2Q86UK5 1308 aa22.82■■□□□ 1.24
TMEM259-206ENST00000589055 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
TMEM259-206ENST00000589055 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
TMEM259-206ENST00000589055 USP6P35125 1406 aa22.8■■□□□ 1.24
TMEM259-206ENST00000589055 USP19O94966 1318 aa22.79■■□□□ 1.24
TMEM259-206ENST00000589055 PSDA5PKW4 1024 aaPredicted RBP22.78■■□□□ 1.24
TMEM259-206ENST00000589055 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
TMEM259-206ENST00000589055 A0A0G2JS52 829 aa22.77■■□□□ 1.24
TMEM259-206ENST00000589055 MYT1Q01538 1121 aa22.77■■□□□ 1.24
TMEM259-206ENST00000589055 PIK3C2AO00443 1686 aa22.76■■□□□ 1.23
TMEM259-206ENST00000589055 ONECUT3O60422 494 aaPredicted RBP22.75■■□□□ 1.23
TMEM259-206ENST00000589055 STRN4Q9NRL3 753 aa22.75■■□□□ 1.23
TMEM259-206ENST00000589055 AKAP12Q02952 1782 aa22.75■■□□□ 1.23
TMEM259-206ENST00000589055 SPATA31A5Q5VU36 1347 aa22.75■■□□□ 1.23
TMEM259-206ENST00000589055 SPATA31A7Q8IWB4 1347 aa22.75■■□□□ 1.23
TMEM259-206ENST00000589055 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
TMEM259-206ENST00000589055 YY1P25490 414 aa22.73■■□□□ 1.23
TMEM259-206ENST00000589055 LMO7Q8WWI1 1683 aa22.73■■□□□ 1.23
TMEM259-206ENST00000589055 THSD7AQ9UPZ6 1657 aa22.72■■□□□ 1.23
TMEM259-206ENST00000589055 CAMTA1Q9Y6Y1 1673 aa22.72■■□□□ 1.23
TMEM259-206ENST00000589055 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
TMEM259-206ENST00000589055 NLRP13Q86W25 1043 aa22.72■■□□□ 1.23
TMEM259-206ENST00000589055 GCP02774 474 aa22.71■■□□□ 1.23
TMEM259-206ENST00000589055 BRD4O60885 1362 aaPredicted RBP22.71■■□□□ 1.23
TMEM259-206ENST00000589055 SBNO2Q9Y2G9 1366 aa22.71■■□□□ 1.23
TMEM259-206ENST00000589055 CPDO75976 1380 aa22.7■■□□□ 1.22
TMEM259-206ENST00000589055 SLIT3O75094 1523 aa22.7■■□□□ 1.22
TMEM259-206ENST00000589055 SPATA31A1Q5TZJ5 1347 aa22.69■■□□□ 1.22
TMEM259-206ENST00000589055 ZBTB7CA1YPR0 619 aa22.69■■□□□ 1.22
TMEM259-206ENST00000589055 NLRP6P59044 892 aa22.69■■□□□ 1.22
TMEM259-206ENST00000589055 CPSF1Q10570 1443 aaKnown RBP22.68■■□□□ 1.22
TMEM259-206ENST00000589055 TTC21BQ7Z4L5 1316 aa22.68■■□□□ 1.22
TMEM259-206ENST00000589055 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
TMEM259-206ENST00000589055 BAG6P46379 1132 aa22.67■■□□□ 1.22
TMEM259-206ENST00000589055 USP35Q9P2H5 1018 aa22.67■■□□□ 1.22
TMEM259-206ENST00000589055 MON2Q7Z3U7 1717 aa22.67■■□□□ 1.22
TMEM259-206ENST00000589055 LARP1Q6PKG0 1096 aaKnown RBP22.66■■□□□ 1.22
TMEM259-206ENST00000589055 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
TMEM259-206ENST00000589055 KTN1Q86UP2 1357 aaKnown RBP22.65■■□□□ 1.22
TMEM259-206ENST00000589055 EVA1CP58658 441 aa22.64■■□□□ 1.21
TMEM259-206ENST00000589055 COL5A2P05997 1499 aaPredicted RBP22.64■■□□□ 1.21
TMEM259-206ENST00000589055 SOX12O15370 315 aa22.63■■□□□ 1.21
TMEM259-206ENST00000589055 TMC1Q8TDI8 760 aa22.62■■□□□ 1.21
TMEM259-206ENST00000589055 ZNF692Q9BU19 519 aaPredicted RBP22.62■■□□□ 1.21
TMEM259-206ENST00000589055 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
TMEM259-206ENST00000589055 COL18A1P39060 1754 aa22.61■■□□□ 1.21
TMEM259-206ENST00000589055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.6■■□□□ 1.21
TMEM259-206ENST00000589055 TESK2Q96S53 571 aa22.6■■□□□ 1.21
TMEM259-206ENST00000589055 PCGF6Q9BYE7 350 aa22.6■■□□□ 1.21
TMEM259-206ENST00000589055 SLC12A5Q9H2X9 1139 aa22.6■■□□□ 1.21
TMEM259-206ENST00000589055 RGPD1P0DJD0 1748 aa22.6■■□□□ 1.21
TMEM259-206ENST00000589055 TTC21AQ8NDW8 1320 aa22.59■■□□□ 1.21
TMEM259-206ENST00000589055 NFAT5O94916 1531 aa22.58■■□□□ 1.21
TMEM259-206ENST00000589055 R3HDM1Q15032 1099 aaKnown RBP22.58■■□□□ 1.21
TMEM259-206ENST00000589055 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.21
TMEM259-206ENST00000589055 NME9Q86XW9 330 aa22.57■■□□□ 1.2
TMEM259-206ENST00000589055 A0A1W2PP64 1363 aa22.57■■□□□ 1.2
TMEM259-206ENST00000589055 TCP11L2Q8N4U5 519 aa22.56■■□□□ 1.2
TMEM259-206ENST00000589055 AXIN2Q9Y2T1 843 aa22.56■■□□□ 1.2
TMEM259-206ENST00000589055 RGPD5Q99666 1765 aa22.55■■□□□ 1.2
TMEM259-206ENST00000589055 BARGINQ6ZT62 677 aa22.55■■□□□ 1.2
TMEM259-206ENST00000589055 CRB1P82279 1406 aa22.55■■□□□ 1.2
TMEM259-206ENST00000589055 TNS1Q9HBL0 1735 aaKnown RBP22.54■■□□□ 1.2
TMEM259-206ENST00000589055 USP47Q96K76 1375 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms