RNA–Protein interactions for RNA: ENST00000588965.5

FARSA-208, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 5

Gene FARSA, Length 1,831 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-208ENST00000588965 NCOA3Q9Y6Q9 1424 aa26.52■■□□□ 1.84
FARSA-208ENST00000588965 ZRANB1Q9UGI0 708 aa26.51■■□□□ 1.83
FARSA-208ENST00000588965 ATF3P18847 181 aa26.5■■□□□ 1.83
FARSA-208ENST00000588965 MTHFSP49914 203 aa26.5■■□□□ 1.83
FARSA-208ENST00000588965 COG3Q96JB2 828 aa26.49■■□□□ 1.83
FARSA-208ENST00000588965 NRKQ7Z2Y5 1582 aa26.49■■□□□ 1.83
FARSA-208ENST00000588965 WDR43Q15061 677 aaKnown RBP eCLIP26.49■■□□□ 1.83
FARSA-208ENST00000588965 SSH2Q76I76 1423 aa26.46■■□□□ 1.83
FARSA-208ENST00000588965 ORAI2Q96SN7 254 aa26.46■■□□□ 1.83
FARSA-208ENST00000588965 MSH6P52701 1360 aa26.45■■□□□ 1.82
FARSA-208ENST00000588965 CFAP53Q96M91 514 aa26.45■■□□□ 1.82
FARSA-208ENST00000588965 TTC21AQ8NDW8 1320 aa26.45■■□□□ 1.82
FARSA-208ENST00000588965 DCCP43146 1447 aa26.44■■□□□ 1.82
FARSA-208ENST00000588965 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
FARSA-208ENST00000588965 ADAMTS8Q9UP79 889 aa26.43■■□□□ 1.82
FARSA-208ENST00000588965 C1orf167Q5SNV9 1468 aa26.43■■□□□ 1.82
FARSA-208ENST00000588965 CADPS2Q86UW7 1296 aa26.42■■□□□ 1.82
FARSA-208ENST00000588965 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
FARSA-208ENST00000588965 PAK3O75914 559 aaPredicted RBP26.41■■□□□ 1.82
FARSA-208ENST00000588965 FBLN1P23142 703 aa26.41■■□□□ 1.82
FARSA-208ENST00000588965 PSME1Q06323 249 aa26.41■■□□□ 1.82
FARSA-208ENST00000588965 SENP3-EIF4A1A0A087X0R7 540 aa26.39■■□□□ 1.82
FARSA-208ENST00000588965 MST1RQ04912 1400 aa26.39■■□□□ 1.82
FARSA-208ENST00000588965 PPM1GO15355 546 aaPredicted RBP26.37■■□□□ 1.81
FARSA-208ENST00000588965 FOXO3O43524 673 aa26.37■■□□□ 1.81
FARSA-208ENST00000588965 OVOS2A0A0J9YW53 1432 aa26.37■■□□□ 1.81
FARSA-208ENST00000588965 OVOS2Q6IE36 1432 aa26.37■■□□□ 1.81
FARSA-208ENST00000588965 XIRP1Q702N8 1843 aaKnown RBP26.37■■□□□ 1.81
FARSA-208ENST00000588965 POLKQ9UBT6 870 aa26.37■■□□□ 1.81
FARSA-208ENST00000588965 ZBED9Q6R2W3 1325 aa26.36■■□□□ 1.81
FARSA-208ENST00000588965 INSRP06213 1382 aa26.35■■□□□ 1.81
FARSA-208ENST00000588965 AATKQ6ZMQ8 1374 aa26.35■■□□□ 1.81
FARSA-208ENST00000588965 ABTB2Q8N961 1025 aa26.35■■□□□ 1.81
FARSA-208ENST00000588965 BLMP54132 1417 aaPredicted RBP26.34■■□□□ 1.81
FARSA-208ENST00000588965 NLRP6P59044 892 aa26.34■■□□□ 1.81
FARSA-208ENST00000588965 XPCQ01831 940 aaPredicted RBP26.33■■□□□ 1.81
FARSA-208ENST00000588965 NUTM2GQ5VZR2 741 aa26.33■■□□□ 1.81
FARSA-208ENST00000588965 EMILIN1Q9Y6C2 1016 aa26.33■■□□□ 1.81
FARSA-208ENST00000588965 SOX12O15370 315 aa26.32■■□□□ 1.8
FARSA-208ENST00000588965 RRS1Q15050 365 aaKnown RBP26.32■■□□□ 1.8
FARSA-208ENST00000588965 PIK3C2AO00443 1686 aa26.32■■□□□ 1.8
FARSA-208ENST00000588965 USP31Q70CQ4 1352 aa26.32■■□□□ 1.8
FARSA-208ENST00000588965 KIF1AQ12756 1690 aa26.31■■□□□ 1.8
FARSA-208ENST00000588965 SHPRHQ149N8 1683 aa26.3■■□□□ 1.8
FARSA-208ENST00000588965 KRT28Q7Z3Y7 464 aa26.29■■□□□ 1.8
FARSA-208ENST00000588965 NUDCQ9Y266 331 aa26.29■■□□□ 1.8
FARSA-208ENST00000588965 CCDC146Q8IYE0 955 aa26.28■■□□□ 1.8
FARSA-208ENST00000588965 SALL2Q9Y467 1007 aaPredicted RBP26.28■■□□□ 1.8
FARSA-208ENST00000588965 PNPLA6Q8IY17 1366 aa26.28■■□□□ 1.8
FARSA-208ENST00000588965 COL3A1P02461 1466 aaPredicted RBP26.28■■□□□ 1.8
FARSA-208ENST00000588965 DIAPH1O60610 1272 aaKnown RBP26.28■■□□□ 1.8
FARSA-208ENST00000588965 MAP2P11137 1827 aaKnown RBP26.27■■□□□ 1.8
FARSA-208ENST00000588965 SMG6Q86US8 1419 aaKnown RBP26.27■■□□□ 1.8
FARSA-208ENST00000588965 U2SURPO15042 1029 aaKnown RBP26.26■■□□□ 1.79
FARSA-208ENST00000588965 U2AF1L5P0DN76 240 aaPredicted RBP26.26■■□□□ 1.79
FARSA-208ENST00000588965 U2AF1Q01081 240 aaKnown RBP eCLIP26.26■■□□□ 1.79
FARSA-208ENST00000588965 LMOD2Q6P5Q4 547 aa26.24■■□□□ 1.79
FARSA-208ENST00000588965 SLAIN2Q9P270 581 aa26.24■■□□□ 1.79
FARSA-208ENST00000588965 CDK12Q9NYV4 1490 aaPredicted RBP26.24■■□□□ 1.79
FARSA-208ENST00000588965 DDX17Q92841 729 aaKnown RBP26.23■■□□□ 1.79
FARSA-208ENST00000588965 NPHP3Q7Z494 1330 aa26.22■■□□□ 1.79
FARSA-208ENST00000588965 BRINP3Q76B58 766 aa26.21■■□□□ 1.79
FARSA-208ENST00000588965 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
FARSA-208ENST00000588965 MAP3K19Q56UN5 1328 aa26.19■■□□□ 1.78
FARSA-208ENST00000588965 USP54Q70EL1 1684 aa26.19■■□□□ 1.78
FARSA-208ENST00000588965 TRPM3Q9HCF6 1732 aaPredicted RBP26.18■■□□□ 1.78
FARSA-208ENST00000588965 MARF1Q9Y4F3 1742 aaKnown RBP26.18■■□□□ 1.78
FARSA-208ENST00000588965 APAF1O14727 1248 aa26.18■■□□□ 1.78
FARSA-208ENST00000588965 PLEKHG5O94827 1062 aa26.17■■□□□ 1.78
FARSA-208ENST00000588965 RUNDC1Q96C34 613 aa26.17■■□□□ 1.78
FARSA-208ENST00000588965 IL13P35225 146 aa26.16■■□□□ 1.78
FARSA-208ENST00000588965 AMPHP49418 695 aa26.16■■□□□ 1.78
FARSA-208ENST00000588965 LTBP4Q8N2S1 1624 aa26.15■■□□□ 1.78
FARSA-208ENST00000588965 HSP90AB2PQ58FF8 381 aa26.14■■□□□ 1.78
FARSA-208ENST00000588965 SBNO1A3KN83 1393 aa26.14■■□□□ 1.78
FARSA-208ENST00000588965 KCNH5Q8NCM2 988 aa26.14■■□□□ 1.77
FARSA-208ENST00000588965 PEAK1Q9H792 1746 aa26.13■■□□□ 1.77
FARSA-208ENST00000588965 FLT4P35916 1363 aa26.13■■□□□ 1.77
FARSA-208ENST00000588965 PXDNQ92626 1479 aa26.11■■□□□ 1.77
FARSA-208ENST00000588965 EIF4A2Q14240 407 aaKnown RBP26.11■■□□□ 1.77
FARSA-208ENST00000588965 TCP11L2Q8N4U5 519 aa26.09■■□□□ 1.77
FARSA-208ENST00000588965 PNNQ9H307 717 aaKnown RBP26.09■■□□□ 1.77
FARSA-208ENST00000588965 GCP02774 474 aa26.09■■□□□ 1.77
FARSA-208ENST00000588965 HMOX1P09601 288 aa26.09■■□□□ 1.77
FARSA-208ENST00000588965 TNS3Q68CZ2 1445 aa26.09■■□□□ 1.77
FARSA-208ENST00000588965 NFAT5O94916 1531 aa26.08■■□□□ 1.77
FARSA-208ENST00000588965 ZBTB7CA1YPR0 619 aa26.08■■□□□ 1.77
FARSA-208ENST00000588965 FCHSD2O94868 740 aa26.08■■□□□ 1.77
FARSA-208ENST00000588965 ALS2Q96Q42 1657 aa26.08■■□□□ 1.77
FARSA-208ENST00000588965 USP19O94966 1318 aa26.08■■□□□ 1.77
FARSA-208ENST00000588965 MAPK8IP3Q9UPT6 1336 aa26.08■■□□□ 1.77
FARSA-208ENST00000588965 HOXC9P31274 260 aa26.07■■□□□ 1.76
FARSA-208ENST00000588965 PDE3BQ13370 1112 aa26.07■■□□□ 1.76
FARSA-208ENST00000588965 NEUROD2Q15784 382 aa26.07■■□□□ 1.76
FARSA-208ENST00000588965 RRP7AQ9Y3A4 280 aaKnown RBP26.07■■□□□ 1.76
FARSA-208ENST00000588965 KIF24Q5T7B8 1368 aa26.07■■□□□ 1.76
FARSA-208ENST00000588965 PLEKHF1Q96S99 279 aa26.07■■□□□ 1.76
FARSA-208ENST00000588965 SPATA31A3Q5VYP0 1347 aa26.06■■□□□ 1.76
FARSA-208ENST00000588965 SLIT3O75094 1523 aa26.06■■□□□ 1.76
FARSA-208ENST00000588965 IQSEC2Q5JU85 1478 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms