RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 GLI3P10071 1580 aa25.84■■□□□ 1.73
HDAC5-209ENST00000588703 ACEP12821 1306 aa25.84■■□□□ 1.73
HDAC5-209ENST00000588703 SRPK2P78362 688 aaKnown RBP25.83■■□□□ 1.73
HDAC5-209ENST00000588703 UNC5CLQ8IV45 518 aa25.83■■□□□ 1.73
HDAC5-209ENST00000588703 CABP2Q9NPB3 220 aa25.83■■□□□ 1.73
HDAC5-209ENST00000588703 NRAPQ86VF7 1730 aa25.83■■□□□ 1.72
HDAC5-209ENST00000588703 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
HDAC5-209ENST00000588703 PPIP5K1Q6PFW1 1433 aa25.82■■□□□ 1.72
HDAC5-209ENST00000588703 PHRF1Q9P1Y6 1649 aaKnown RBP25.82■■□□□ 1.72
HDAC5-209ENST00000588703 PAK3O75914 559 aaPredicted RBP25.82■■□□□ 1.72
HDAC5-209ENST00000588703 UPF1Q92900 1129 aaKnown RBP eCLIP25.82■■□□□ 1.723e-7■■■□□ 18.5
HDAC5-209ENST00000588703 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
HDAC5-209ENST00000588703 COL14A1Q05707 1796 aaKnown RBP25.8■■□□□ 1.72
HDAC5-209ENST00000588703 FAM83GA6ND36 823 aa25.79■■□□□ 1.72
HDAC5-209ENST00000588703 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
HDAC5-209ENST00000588703 EP400Q96L91 3159 aa25.77■■□□□ 1.72
HDAC5-209ENST00000588703 EVC2Q86UK5 1308 aa25.75■■□□□ 1.71
HDAC5-209ENST00000588703 BRWD3Q6RI45 1802 aa25.74■■□□□ 1.71
HDAC5-209ENST00000588703 NUTM2GQ5VZR2 741 aa25.73■■□□□ 1.71
HDAC5-209ENST00000588703 VPS72Q15906 364 aa25.72■■□□□ 1.71
HDAC5-209ENST00000588703 CABP1Q9NZU7 370 aa25.72■■□□□ 1.71
HDAC5-209ENST00000588703 NRKQ7Z2Y5 1582 aa25.72■■□□□ 1.71
HDAC5-209ENST00000588703 AKAP12Q02952 1782 aa25.72■■□□□ 1.71
HDAC5-209ENST00000588703 CARD11Q9BXL7 1154 aa25.71■■□□□ 1.71
HDAC5-209ENST00000588703 SBNO2Q9Y2G9 1366 aa25.7■■□□□ 1.71
HDAC5-209ENST00000588703 USP6P35125 1406 aa25.7■■□□□ 1.7
HDAC5-209ENST00000588703 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
HDAC5-209ENST00000588703 BTG4Q9NY30 223 aa25.69■■□□□ 1.7
HDAC5-209ENST00000588703 KIAA0232Q92628 1395 aa25.68■■□□□ 1.7
HDAC5-209ENST00000588703 USP19O94966 1318 aa25.67■■□□□ 1.7
HDAC5-209ENST00000588703 SSH2Q76I76 1423 aa25.67■■□□□ 1.7
HDAC5-209ENST00000588703 ABTB2Q8N961 1025 aa25.67■■□□□ 1.7
HDAC5-209ENST00000588703 PIK3C2AO00443 1686 aa25.67■■□□□ 1.7
HDAC5-209ENST00000588703 BRD4O60885 1362 aaPredicted RBP25.67■■□□□ 1.7
HDAC5-209ENST00000588703 PRDM11Q9NQV5 511 aa25.66■■□□□ 1.7
HDAC5-209ENST00000588703 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.7
HDAC5-209ENST00000588703 ZC3H6P61129 1189 aaKnown RBP25.63■■□□□ 1.69
HDAC5-209ENST00000588703 LMO7Q8WWI1 1683 aa25.62■■□□□ 1.69
HDAC5-209ENST00000588703 ONECUT3O60422 494 aaPredicted RBP25.62■■□□□ 1.69
HDAC5-209ENST00000588703 CHRNA2Q15822 529 aa25.62■■□□□ 1.69
HDAC5-209ENST00000588703 MON2Q7Z3U7 1717 aa25.62■■□□□ 1.69
HDAC5-209ENST00000588703 SLIT3O75094 1523 aa25.6■■□□□ 1.69
HDAC5-209ENST00000588703 SEPT12Q8IYM1 358 aa25.6■■□□□ 1.69
HDAC5-209ENST00000588703 CPSF1Q10570 1443 aaKnown RBP25.6■■□□□ 1.69
HDAC5-209ENST00000588703 CPDO75976 1380 aa25.59■■□□□ 1.69
HDAC5-209ENST00000588703 NLRP13Q86W25 1043 aa25.59■■□□□ 1.69
HDAC5-209ENST00000588703 SPATA31A5Q5VU36 1347 aa25.58■■□□□ 1.69
HDAC5-209ENST00000588703 SPATA31A7Q8IWB4 1347 aa25.58■■□□□ 1.69
HDAC5-209ENST00000588703 THSD7AQ9UPZ6 1657 aa25.58■■□□□ 1.68
HDAC5-209ENST00000588703 CAMTA1Q9Y6Y1 1673 aa25.58■■□□□ 1.68
HDAC5-209ENST00000588703 CD163L1Q9NR16 1453 aa25.56■■□□□ 1.68
HDAC5-209ENST00000588703 GCP02774 474 aa25.56■■□□□ 1.68
HDAC5-209ENST00000588703 FAM98CQ17RN3 349 aaKnown RBP25.55■■□□□ 1.68
HDAC5-209ENST00000588703 ZNF692Q9BU19 519 aaPredicted RBP25.55■■□□□ 1.68
HDAC5-209ENST00000588703 TTC21BQ7Z4L5 1316 aa25.55■■□□□ 1.68
HDAC5-209ENST00000588703 NLRP6P59044 892 aa25.54■■□□□ 1.68
HDAC5-209ENST00000588703 TESK2Q96S53 571 aa25.53■■□□□ 1.68
HDAC5-209ENST00000588703 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
HDAC5-209ENST00000588703 KTN1Q86UP2 1357 aaKnown RBP25.53■■□□□ 1.68
HDAC5-209ENST00000588703 COL18A1P39060 1754 aa25.51■■□□□ 1.67
HDAC5-209ENST00000588703 ST20-MTHFSA0A0A6YYL1 179 aa25.51■■□□□ 1.67
HDAC5-209ENST00000588703 STRN4Q9NRL3 753 aa25.51■■□□□ 1.67
HDAC5-209ENST00000588703 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
HDAC5-209ENST00000588703 USP54Q70EL1 1684 aa25.51■■□□□ 1.67
HDAC5-209ENST00000588703 KRT27Q7Z3Y8 459 aa25.5■■□□□ 1.67
HDAC5-209ENST00000588703 TTC21AQ8NDW8 1320 aa25.5■■□□□ 1.67
HDAC5-209ENST00000588703 CLSPNQ9HAW4 1339 aa25.5■■□□□ 1.67
HDAC5-209ENST00000588703 COL5A2P05997 1499 aaPredicted RBP25.48■■□□□ 1.67
HDAC5-209ENST00000588703 A0A0G2JS52 829 aa25.48■■□□□ 1.67
HDAC5-209ENST00000588703 MYT1Q01538 1121 aa25.48■■□□□ 1.67
HDAC5-209ENST00000588703 CCDC125Q86Z20 511 aa25.47■■□□□ 1.67
HDAC5-209ENST00000588703 PUS7Q96PZ0 661 aaKnown RBP25.47■■□□□ 1.67
HDAC5-209ENST00000588703 NFAT5O94916 1531 aa25.47■■□□□ 1.67
HDAC5-209ENST00000588703 BLMP54132 1417 aaPredicted RBP25.46■■□□□ 1.67
HDAC5-209ENST00000588703 USP47Q96K76 1375 aa25.46■■□□□ 1.67
HDAC5-209ENST00000588703 TMC1Q8TDI8 760 aa25.46■■□□□ 1.67
HDAC5-209ENST00000588703 SLC12A5Q9H2X9 1139 aa25.46■■□□□ 1.67
HDAC5-209ENST00000588703 RGPD5Q99666 1765 aa25.46■■□□□ 1.67
HDAC5-209ENST00000588703 AATKQ6ZMQ8 1374 aa25.45■■□□□ 1.67
HDAC5-209ENST00000588703 LARP1Q6PKG0 1096 aaKnown RBP25.45■■□□□ 1.66
HDAC5-209ENST00000588703 EVA1CP58658 441 aa25.44■■□□□ 1.66
HDAC5-209ENST00000588703 A0A1W2PP64 1363 aa25.44■■□□□ 1.66
HDAC5-209ENST00000588703 TIMELESSQ9UNS1 1208 aa25.43■■□□□ 1.66
HDAC5-209ENST00000588703 ZBTB7CA1YPR0 619 aa25.42■■□□□ 1.66
HDAC5-209ENST00000588703 ZRANB1Q9UGI0 708 aa25.42■■□□□ 1.66
HDAC5-209ENST00000588703 EDC4Q6P2E9 1401 aaKnown RBP25.41■■□□□ 1.66
HDAC5-209ENST00000588703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.41■■□□□ 1.662e-6■■□□□ 11.5
HDAC5-209ENST00000588703 USP35Q9P2H5 1018 aa25.41■■□□□ 1.66
HDAC5-209ENST00000588703 USP31Q70CQ4 1352 aa25.41■■□□□ 1.66
HDAC5-209ENST00000588703 HDGFL2Q7Z4V5 671 aaPredicted RBP25.4■■□□□ 1.66
HDAC5-209ENST00000588703 BARGINQ6ZT62 677 aa25.39■■□□□ 1.66
HDAC5-209ENST00000588703 ARHGEF25Q86VW2 580 aa25.39■■□□□ 1.66
HDAC5-209ENST00000588703 NME9Q86XW9 330 aa25.39■■□□□ 1.66
HDAC5-209ENST00000588703 KCNH5Q8NCM2 988 aa25.39■■□□□ 1.66
HDAC5-209ENST00000588703 NINLQ9Y2I6 1382 aa25.39■■□□□ 1.65
HDAC5-209ENST00000588703 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
HDAC5-209ENST00000588703 WNK3Q9BYP7 1800 aa25.38■■□□□ 1.65
HDAC5-209ENST00000588703 SOX12O15370 315 aa25.38■■□□□ 1.65
HDAC5-209ENST00000588703 FAM182BQ5T319 152 aa25.38■■□□□ 1.65
HDAC5-209ENST00000588703 LTN1O94822 1766 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms