RNA–Protein interactions for RNA: ENST00000588533.5

MARK4-204, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 2

Gene MARK4, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-204ENST00000588533 CCER1Q8TC90 406 aaPredicted RBP12.65□□□□□ -0.38
MARK4-204ENST00000588533 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
MARK4-204ENST00000588533 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
MARK4-204ENST00000588533 USP21Q9UK80 565 aa12.63□□□□□ -0.39
MARK4-204ENST00000588533 RGS12O14924 1447 aa12.62□□□□□ -0.39
MARK4-204ENST00000588533 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
MARK4-204ENST00000588533 ACEP12821 1306 aa12.62□□□□□ -0.39
MARK4-204ENST00000588533 ATAD2Q6PL18 1390 aa12.61□□□□□ -0.39
MARK4-204ENST00000588533 BRWD3Q6RI45 1802 aa12.61□□□□□ -0.39
MARK4-204ENST00000588533 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
MARK4-204ENST00000588533 CLSPNQ9HAW4 1339 aa12.61□□□□□ -0.39
MARK4-204ENST00000588533 GLI3P10071 1580 aa12.6□□□□□ -0.39
MARK4-204ENST00000588533 CDK12Q9NYV4 1490 aaPredicted RBP12.6□□□□□ -0.39
MARK4-204ENST00000588533 RXRBP28702 533 aa12.6□□□□□ -0.39
MARK4-204ENST00000588533 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
MARK4-204ENST00000588533 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
MARK4-204ENST00000588533 USP6P35125 1406 aa12.6□□□□□ -0.39
MARK4-204ENST00000588533 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
MARK4-204ENST00000588533 USP47Q96K76 1375 aa12.59□□□□□ -0.39
MARK4-204ENST00000588533 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
MARK4-204ENST00000588533 LTN1O94822 1766 aa12.59□□□□□ -0.39
MARK4-204ENST00000588533 SLIT2O94813 1529 aa12.59□□□□□ -0.39
MARK4-204ENST00000588533 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
MARK4-204ENST00000588533 ATRNO75882 1429 aa12.59□□□□□ -0.39
MARK4-204ENST00000588533 MYOM1P52179 1685 aa12.58□□□□□ -0.4
MARK4-204ENST00000588533 QTRT2Q9H974 415 aaKnown RBP12.58□□□□□ -0.4
MARK4-204ENST00000588533 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
MARK4-204ENST00000588533 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
MARK4-204ENST00000588533 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
MARK4-204ENST00000588533 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
MARK4-204ENST00000588533 A0A0G2JS52 829 aa12.56□□□□□ -0.4
MARK4-204ENST00000588533 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
MARK4-204ENST00000588533 MYT1Q01538 1121 aa12.56□□□□□ -0.4
MARK4-204ENST00000588533 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
MARK4-204ENST00000588533 USP54Q70EL1 1684 aa12.56□□□□□ -0.4
MARK4-204ENST00000588533 LMO7Q8WWI1 1683 aa12.55□□□□□ -0.4
MARK4-204ENST00000588533 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
MARK4-204ENST00000588533 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
MARK4-204ENST00000588533 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
MARK4-204ENST00000588533 SLIT3O75094 1523 aa12.55□□□□□ -0.4
MARK4-204ENST00000588533 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
MARK4-204ENST00000588533 KIAA0232Q92628 1395 aa12.55□□□□□ -0.4
MARK4-204ENST00000588533 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
MARK4-204ENST00000588533 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
MARK4-204ENST00000588533 FNBP4Q8N3X1 1017 aaPredicted RBP12.53□□□□□ -0.4
MARK4-204ENST00000588533 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
MARK4-204ENST00000588533 SOX12O15370 315 aa12.52□□□□□ -0.41
MARK4-204ENST00000588533 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
MARK4-204ENST00000588533 BRD4O60885 1362 aaPredicted RBP12.52□□□□□ -0.41
MARK4-204ENST00000588533 CHRNA2Q15822 529 aa12.51□□□□□ -0.41
MARK4-204ENST00000588533 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
MARK4-204ENST00000588533 NLRP13Q86W25 1043 aa12.51□□□□□ -0.41
MARK4-204ENST00000588533 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
MARK4-204ENST00000588533 NLRP6P59044 892 aa12.5□□□□□ -0.41
MARK4-204ENST00000588533 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
MARK4-204ENST00000588533 USP19O94966 1318 aa12.5□□□□□ -0.41
MARK4-204ENST00000588533 A0A1W2PP64 1363 aa12.5□□□□□ -0.41
MARK4-204ENST00000588533 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
MARK4-204ENST00000588533 THSD7AQ9UPZ6 1657 aa12.5□□□□□ -0.41
MARK4-204ENST00000588533 CD163L1Q9NR16 1453 aa12.49□□□□□ -0.41
MARK4-204ENST00000588533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.49□□□□□ -0.41
MARK4-204ENST00000588533 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
MARK4-204ENST00000588533 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
MARK4-204ENST00000588533 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 NFAT5O94916 1531 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
MARK4-204ENST00000588533 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 TTC21AQ8NDW8 1320 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 FAM83GA6ND36 823 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 TMF1P82094 1093 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 COL18A1P39060 1754 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
MARK4-204ENST00000588533 CAMTA1Q9Y6Y1 1673 aa12.48□□□□□ -0.41
MARK4-204ENST00000588533 SSH2Q76I76 1423 aa12.47□□□□□ -0.41
MARK4-204ENST00000588533 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
MARK4-204ENST00000588533 VPS72Q15906 364 aa12.47□□□□□ -0.41
MARK4-204ENST00000588533 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
MARK4-204ENST00000588533 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
MARK4-204ENST00000588533 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
MARK4-204ENST00000588533 TESK2Q96S53 571 aa12.46□□□□□ -0.41
MARK4-204ENST00000588533 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
MARK4-204ENST00000588533 PARP4Q9UKK3 1724 aaKnown RBP12.45□□□□□ -0.42
MARK4-204ENST00000588533 CPDO75976 1380 aa12.45□□□□□ -0.42
MARK4-204ENST00000588533 EVA1CP58658 441 aa12.45□□□□□ -0.42
MARK4-204ENST00000588533 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
MARK4-204ENST00000588533 ABCC6O95255 1503 aa12.45□□□□□ -0.42
MARK4-204ENST00000588533 GCP02774 474 aa12.44□□□□□ -0.42
MARK4-204ENST00000588533 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
MARK4-204ENST00000588533 NME9Q86XW9 330 aa12.44□□□□□ -0.42
MARK4-204ENST00000588533 SLC12A5Q9H2X9 1139 aa12.44□□□□□ -0.42
MARK4-204ENST00000588533 TNS1Q9HBL0 1735 aaKnown RBP12.44□□□□□ -0.42
MARK4-204ENST00000588533 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
MARK4-204ENST00000588533 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
MARK4-204ENST00000588533 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
MARK4-204ENST00000588533 OVOS2A0A0J9YW53 1432 aa12.43□□□□□ -0.42
MARK4-204ENST00000588533 OVOS2Q6IE36 1432 aa12.43□□□□□ -0.42
MARK4-204ENST00000588533 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
MARK4-204ENST00000588533 CDCA8Q53HL2 280 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms