RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CD163L1Q9NR16 1453 aa14.11□□□□□ -0.15
CHMP1B-202ENST00000588284 CERKQ8TCT0 537 aa14.1□□□□□ -0.15
CHMP1B-202ENST00000588284 C19orf44Q9H6X5 657 aa14.1□□□□□ -0.15
CHMP1B-202ENST00000588284 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
CHMP1B-202ENST00000588284 NWD1Q149M9 1564 aa14.09□□□□□ -0.15
CHMP1B-202ENST00000588284 EDC4Q6P2E9 1401 aaKnown RBP14.09□□□□□ -0.15
CHMP1B-202ENST00000588284 NUTM2FA1L443 756 aa14.09□□□□□ -0.15
CHMP1B-202ENST00000588284 NGDNQ8NEJ9 315 aaKnown RBP14.09□□□□□ -0.15
CHMP1B-202ENST00000588284 ACEP12821 1306 aa14.09□□□□□ -0.15
CHMP1B-202ENST00000588284 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.15
CHMP1B-202ENST00000588284 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
CHMP1B-202ENST00000588284 GGNBP2Q9H3C7 697 aa14.07□□□□□ -0.16
CHMP1B-202ENST00000588284 CDC42BPGQ6DT37 1551 aa14.07□□□□□ -0.16
CHMP1B-202ENST00000588284 ABCB7O75027 752 aa14.06□□□□□ -0.16
CHMP1B-202ENST00000588284 DSG3P32926 999 aa14.06□□□□□ -0.16
CHMP1B-202ENST00000588284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHMP1B-202ENST00000588284 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
CHMP1B-202ENST00000588284 INSRP06213 1382 aa14.06□□□□□ -0.16
CHMP1B-202ENST00000588284 ATF3P18847 181 aa14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 POLA2Q14181 598 aa14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 PMFBP1Q8TBY8 1022 aa14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 RBM33Q96EV2 1170 aaKnown RBP14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 COG3Q96JB2 828 aa14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 TTC21AQ8NDW8 1320 aa14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
CHMP1B-202ENST00000588284 TNNT2P45379 298 aaPredicted RBP14.03□□□□□ -0.16
CHMP1B-202ENST00000588284 MTHFSP49914 203 aa14.03□□□□□ -0.16
CHMP1B-202ENST00000588284 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
CHMP1B-202ENST00000588284 ITSN1Q15811 1721 aa14.03□□□□□ -0.16
CHMP1B-202ENST00000588284 FMN2Q9NZ56 1722 aa14.03□□□□□ -0.16
CHMP1B-202ENST00000588284 STRCQ7RTU9 1775 aa14.03□□□□□ -0.16
CHMP1B-202ENST00000588284 USP6P35125 1406 aa14.02□□□□□ -0.16
CHMP1B-202ENST00000588284 TMEM94Q12767 1356 aa14.02□□□□□ -0.17
CHMP1B-202ENST00000588284 ESCO1Q5FWF5 840 aa14.02□□□□□ -0.17
CHMP1B-202ENST00000588284 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
CHMP1B-202ENST00000588284 NME9Q86XW9 330 aa14.01□□□□□ -0.17
CHMP1B-202ENST00000588284 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
CHMP1B-202ENST00000588284 DCCP43146 1447 aa14□□□□□ -0.17
CHMP1B-202ENST00000588284 MSH6P52701 1360 aa14□□□□□ -0.17
CHMP1B-202ENST00000588284 PSME1Q06323 249 aa14□□□□□ -0.17
CHMP1B-202ENST00000588284 NUDCQ9Y266 331 aa14□□□□□ -0.17
CHMP1B-202ENST00000588284 NALCNQ8IZF0 1738 aa14□□□□□ -0.17
CHMP1B-202ENST00000588284 MON2Q7Z3U7 1717 aa13.99□□□□□ -0.17
CHMP1B-202ENST00000588284 SSH2Q76I76 1423 aa13.98□□□□□ -0.17
CHMP1B-202ENST00000588284 AATKQ6ZMQ8 1374 aa13.98□□□□□ -0.17
CHMP1B-202ENST00000588284 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
CHMP1B-202ENST00000588284 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
CHMP1B-202ENST00000588284 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
CHMP1B-202ENST00000588284 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
CHMP1B-202ENST00000588284 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
CHMP1B-202ENST00000588284 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
CHMP1B-202ENST00000588284 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
CHMP1B-202ENST00000588284 ORAI2Q96SN7 254 aa13.96□□□□□ -0.17
CHMP1B-202ENST00000588284 PNNQ9H307 717 aaKnown RBP13.96□□□□□ -0.17
CHMP1B-202ENST00000588284 POLKQ9UBT6 870 aa13.96□□□□□ -0.17
CHMP1B-202ENST00000588284 RGPD8O14715 1765 aaPredicted RBP13.96□□□□□ -0.18
CHMP1B-202ENST00000588284 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
CHMP1B-202ENST00000588284 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
CHMP1B-202ENST00000588284 NLRP6P59044 892 aa13.95□□□□□ -0.18
CHMP1B-202ENST00000588284 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
CHMP1B-202ENST00000588284 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
CHMP1B-202ENST00000588284 ABTB2Q8N961 1025 aa13.94□□□□□ -0.18
CHMP1B-202ENST00000588284 LRRC7Q96NW7 1537 aa13.94□□□□□ -0.18
CHMP1B-202ENST00000588284 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
CHMP1B-202ENST00000588284 FOXO3O43524 673 aa13.93□□□□□ -0.18
CHMP1B-202ENST00000588284 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
CHMP1B-202ENST00000588284 PNPLA6Q8IY17 1366 aa13.93□□□□□ -0.18
CHMP1B-202ENST00000588284 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
CHMP1B-202ENST00000588284 OVOS2A0A0J9YW53 1432 aa13.91□□□□□ -0.18
CHMP1B-202ENST00000588284 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
CHMP1B-202ENST00000588284 MST1RQ04912 1400 aa13.91□□□□□ -0.18
CHMP1B-202ENST00000588284 OVOS2Q6IE36 1432 aa13.91□□□□□ -0.18
CHMP1B-202ENST00000588284 PPM1GO15355 546 aaPredicted RBP13.91□□□□□ -0.18
CHMP1B-202ENST00000588284 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
CHMP1B-202ENST00000588284 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHMP1B-202ENST00000588284 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
CHMP1B-202ENST00000588284 RUNDC1Q96C34 613 aa13.9□□□□□ -0.18
CHMP1B-202ENST00000588284 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
CHMP1B-202ENST00000588284 NRKQ7Z2Y5 1582 aa13.9□□□□□ -0.18
CHMP1B-202ENST00000588284 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.19
CHMP1B-202ENST00000588284 KIF1AQ12756 1690 aa13.89□□□□□ -0.19
CHMP1B-202ENST00000588284 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
CHMP1B-202ENST00000588284 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
CHMP1B-202ENST00000588284 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
CHMP1B-202ENST00000588284 SMG6Q86US8 1419 aaKnown RBP13.88□□□□□ -0.19
CHMP1B-202ENST00000588284 KIF24Q5T7B8 1368 aa13.87□□□□□ -0.19
CHMP1B-202ENST00000588284 FCHSD2O94868 740 aa13.87□□□□□ -0.19
CHMP1B-202ENST00000588284 NEFMP07197 916 aa13.87□□□□□ -0.19
CHMP1B-202ENST00000588284 FBLN1P23142 703 aa13.87□□□□□ -0.19
CHMP1B-202ENST00000588284 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
CHMP1B-202ENST00000588284 MAP2P11137 1827 aaKnown RBP13.87□□□□□ -0.19
CHMP1B-202ENST00000588284 SBNO1A3KN83 1393 aa13.86□□□□□ -0.19
CHMP1B-202ENST00000588284 AMPHP49418 695 aa13.86□□□□□ -0.19
CHMP1B-202ENST00000588284 CDK12Q9NYV4 1490 aaPredicted RBP13.86□□□□□ -0.19
CHMP1B-202ENST00000588284 APAF1O14727 1248 aa13.85□□□□□ -0.19
CHMP1B-202ENST00000588284 IL13P35225 146 aa13.85□□□□□ -0.19
CHMP1B-202ENST00000588284 NUTM2GQ5VZR2 741 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms