RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 TIMELESSQ9UNS1 1208 aa27.26■■□□□ 1.95
CIRBP-217ENST00000588230 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
CIRBP-217ENST00000588230 CCDC61Q9Y6R9 512 aa27.25■■□□□ 1.95
CIRBP-217ENST00000588230 PLEKHG3A1L390 1219 aa27.24■■□□□ 1.95
CIRBP-217ENST00000588230 PLCH1Q4KWH8 1693 aa27.24■■□□□ 1.95
CIRBP-217ENST00000588230 ACEP12821 1306 aa27.22■■□□□ 1.95
CIRBP-217ENST00000588230 EVC2Q86UK5 1308 aa27.22■■□□□ 1.95
CIRBP-217ENST00000588230 CABP2Q9NPB3 220 aa27.22■■□□□ 1.95
CIRBP-217ENST00000588230 NWD2Q9ULI1 1742 aa27.21■■□□□ 1.95
CIRBP-217ENST00000588230 PLEKHG5O94827 1062 aa27.2■■□□□ 1.94
CIRBP-217ENST00000588230 UNC5CLQ8IV45 518 aa27.2■■□□□ 1.94
CIRBP-217ENST00000588230 GLI3P10071 1580 aa27.19■■□□□ 1.94
CIRBP-217ENST00000588230 PPIP5K1Q6PFW1 1433 aa27.19■■□□□ 1.94
CIRBP-217ENST00000588230 HAP1P54257 671 aaPredicted RBP27.18■■□□□ 1.94
CIRBP-217ENST00000588230 UPF1Q92900 1129 aaKnown RBP eCLIP27.18■■□□□ 1.94
CIRBP-217ENST00000588230 FAM83GA6ND36 823 aa27.16■■□□□ 1.94
CIRBP-217ENST00000588230 PAK3O75914 559 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-217ENST00000588230 GJD4Q96KN9 370 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-217ENST00000588230 NRAPQ86VF7 1730 aa27.16■■□□□ 1.94
CIRBP-217ENST00000588230 PHRF1Q9P1Y6 1649 aaKnown RBP27.15■■□□□ 1.94
CIRBP-217ENST00000588230 EP400Q96L91 3159 aa27.13■■□□□ 1.93
CIRBP-217ENST00000588230 COL14A1Q05707 1796 aaKnown RBP27.12■■□□□ 1.93
CIRBP-217ENST00000588230 SBNO2Q9Y2G9 1366 aa27.11■■□□□ 1.93
CIRBP-217ENST00000588230 CABP1Q9NZU7 370 aa27.11■■□□□ 1.93
CIRBP-217ENST00000588230 VPS72Q15906 364 aa27.1■■□□□ 1.93
CIRBP-217ENST00000588230 NRKQ7Z2Y5 1582 aa27.08■■□□□ 1.93
CIRBP-217ENST00000588230 USP6P35125 1406 aa27.07■■□□□ 1.92
CIRBP-217ENST00000588230 SSH2Q76I76 1423 aa27.07■■□□□ 1.92
CIRBP-217ENST00000588230 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
CIRBP-217ENST00000588230 NUTM2GQ5VZR2 741 aa27.07■■□□□ 1.92
CIRBP-217ENST00000588230 USP19O94966 1318 aa27.06■■□□□ 1.92
CIRBP-217ENST00000588230 BRD4O60885 1362 aaPredicted RBP27.06■■□□□ 1.92
CIRBP-217ENST00000588230 ATAD2Q6PL18 1390 aa27.05■■□□□ 1.92
CIRBP-217ENST00000588230 BTG4Q9NY30 223 aa27.04■■□□□ 1.92
CIRBP-217ENST00000588230 KIAA0232Q92628 1395 aa27.04■■□□□ 1.92
CIRBP-217ENST00000588230 USP47Q96K76 1375 aa27.02■■□□□ 1.92
CIRBP-217ENST00000588230 SLC24A1O60721 1099 aa27.02■■□□□ 1.92
CIRBP-217ENST00000588230 ABTB2Q8N961 1025 aa27.02■■□□□ 1.92
CIRBP-217ENST00000588230 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
CIRBP-217ENST00000588230 ONECUT3O60422 494 aaPredicted RBP27.01■■□□□ 1.91
CIRBP-217ENST00000588230 PRDM11Q9NQV5 511 aa27.01■■□□□ 1.91
CIRBP-217ENST00000588230 BRWD3Q6RI45 1802 aa27.01■■□□□ 1.91
CIRBP-217ENST00000588230 TESK2Q96S53 571 aa27■■□□□ 1.91
CIRBP-217ENST00000588230 PIK3C2AO00443 1686 aa27■■□□□ 1.91
CIRBP-217ENST00000588230 CPSF1Q10570 1443 aaKnown RBP26.99■■□□□ 1.91
CIRBP-217ENST00000588230 CPDO75976 1380 aa26.98■■□□□ 1.91
CIRBP-217ENST00000588230 ZNF692Q9BU19 519 aaPredicted RBP26.98■■□□□ 1.91
CIRBP-217ENST00000588230 LMO7Q8WWI1 1683 aa26.98■■□□□ 1.91
CIRBP-217ENST00000588230 SLIT3O75094 1523 aa26.97■■□□□ 1.91
CIRBP-217ENST00000588230 CHRNA2Q15822 529 aa26.97■■□□□ 1.91
CIRBP-217ENST00000588230 ZC3H6P61129 1189 aaKnown RBP26.96■■□□□ 1.91
CIRBP-217ENST00000588230 SEPT12Q8IYM1 358 aa26.96■■□□□ 1.91
CIRBP-217ENST00000588230 TMC1Q8TDI8 760 aa26.96■■□□□ 1.91
CIRBP-217ENST00000588230 PUS7Q96PZ0 661 aaKnown RBP26.96■■□□□ 1.91
CIRBP-217ENST00000588230 CD163L1Q9NR16 1453 aa26.95■■□□□ 1.91
CIRBP-217ENST00000588230 SPATA31A5Q5VU36 1347 aa26.94■■□□□ 1.9
CIRBP-217ENST00000588230 SPATA31A7Q8IWB4 1347 aa26.94■■□□□ 1.9
CIRBP-217ENST00000588230 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
CIRBP-217ENST00000588230 CCDC9Q9Y3X0 531 aaKnown RBP26.94■■□□□ 1.9
CIRBP-217ENST00000588230 MON2Q7Z3U7 1717 aa26.93■■□□□ 1.9
CIRBP-217ENST00000588230 CAMTA1Q9Y6Y1 1673 aa26.93■■□□□ 1.9
CIRBP-217ENST00000588230 GCP02774 474 aa26.93■■□□□ 1.9
CIRBP-217ENST00000588230 THSD7AQ9UPZ6 1657 aa26.92■■□□□ 1.9
CIRBP-217ENST00000588230 TTC21BQ7Z4L5 1316 aa26.91■■□□□ 1.9
CIRBP-217ENST00000588230 TMF1P82094 1093 aa26.91■■□□□ 1.9
CIRBP-217ENST00000588230 KTN1Q86UP2 1357 aaKnown RBP26.9■■□□□ 1.9
CIRBP-217ENST00000588230 SLC12A5Q9H2X9 1139 aa26.9■■□□□ 1.9
CIRBP-217ENST00000588230 FAM98CQ17RN3 349 aaKnown RBP26.89■■□□□ 1.9
CIRBP-217ENST00000588230 NLRP6P59044 892 aa26.88■■□□□ 1.89
CIRBP-217ENST00000588230 HDGFL2Q7Z4V5 671 aaPredicted RBP26.88■■□□□ 1.89
CIRBP-217ENST00000588230 SPATA31A1Q5TZJ5 1347 aa26.88■■□□□ 1.89
CIRBP-217ENST00000588230 TERF2IPQ9NYB0 399 aa26.87■■□□□ 1.89
CIRBP-217ENST00000588230 TTC21AQ8NDW8 1320 aa26.86■■□□□ 1.89
CIRBP-217ENST00000588230 CDCA8Q53HL2 280 aa26.85■■□□□ 1.89
CIRBP-217ENST00000588230 COL18A1P39060 1754 aa26.84■■□□□ 1.89
CIRBP-217ENST00000588230 STRN4Q9NRL3 753 aa26.84■■□□□ 1.89
CIRBP-217ENST00000588230 COL5A2P05997 1499 aaPredicted RBP26.84■■□□□ 1.89
CIRBP-217ENST00000588230 USP54Q70EL1 1684 aa26.84■■□□□ 1.89
CIRBP-217ENST00000588230 KRT27Q7Z3Y8 459 aa26.83■■□□□ 1.89
CIRBP-217ENST00000588230 NFAT5O94916 1531 aa26.83■■□□□ 1.89
CIRBP-217ENST00000588230 NINLQ9Y2I6 1382 aa26.83■■□□□ 1.88
CIRBP-217ENST00000588230 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
CIRBP-217ENST00000588230 AATKQ6ZMQ8 1374 aa26.82■■□□□ 1.88
CIRBP-217ENST00000588230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.81■■□□□ 1.88
CIRBP-217ENST00000588230 BLMP54132 1417 aaPredicted RBP26.81■■□□□ 1.88
CIRBP-217ENST00000588230 LARP1Q6PKG0 1096 aaKnown RBP26.8■■□□□ 1.88
CIRBP-217ENST00000588230 A0A1W2PP64 1363 aa26.8■■□□□ 1.88
CIRBP-217ENST00000588230 CCDC125Q86Z20 511 aa26.79■■□□□ 1.88
CIRBP-217ENST00000588230 USP31Q70CQ4 1352 aa26.79■■□□□ 1.88
CIRBP-217ENST00000588230 EDC4Q6P2E9 1401 aaKnown RBP26.77■■□□□ 1.88
CIRBP-217ENST00000588230 A0A0G2JS52 829 aa26.77■■□□□ 1.88
CIRBP-217ENST00000588230 MYT1Q01538 1121 aa26.77■■□□□ 1.88
CIRBP-217ENST00000588230 ZRANB1Q9UGI0 708 aa26.77■■□□□ 1.88
CIRBP-217ENST00000588230 HSPA5P11021 654 aaKnown RBP26.76■■□□□ 1.87
CIRBP-217ENST00000588230 ARHGEF25Q86VW2 580 aa26.76■■□□□ 1.87
CIRBP-217ENST00000588230 EVA1CP58658 441 aa26.75■■□□□ 1.87
CIRBP-217ENST00000588230 BARGINQ6ZT62 677 aa26.75■■□□□ 1.87
CIRBP-217ENST00000588230 ZBTB7CA1YPR0 619 aa26.74■■□□□ 1.87
CIRBP-217ENST00000588230 NME9Q86XW9 330 aa26.74■■□□□ 1.87
CIRBP-217ENST00000588230 AXIN2Q9Y2T1 843 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms