RNA–Protein interactions for RNA: ENST00000588177.1

SOX9-AS1-215, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 465 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-215ENST00000588177 ORAI2Q96SN7 254 aa13.16□□□□□ -0.3
SOX9-AS1-215ENST00000588177 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
SOX9-AS1-215ENST00000588177 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
SOX9-AS1-215ENST00000588177 PSME1Q06323 249 aa13.15□□□□□ -0.3
SOX9-AS1-215ENST00000588177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
SOX9-AS1-215ENST00000588177 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
SOX9-AS1-215ENST00000588177 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
SOX9-AS1-215ENST00000588177 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
SOX9-AS1-215ENST00000588177 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
SOX9-AS1-215ENST00000588177 PHLPP1O60346 1717 aa13.13□□□□□ -0.31
SOX9-AS1-215ENST00000588177 TOM1O60784 492 aa13.13□□□□□ -0.31
SOX9-AS1-215ENST00000588177 RALBP1Q15311 655 aa13.13□□□□□ -0.31
SOX9-AS1-215ENST00000588177 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
SOX9-AS1-215ENST00000588177 MARF1Q9Y4F3 1742 aaKnown RBP13.13□□□□□ -0.31
SOX9-AS1-215ENST00000588177 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
SOX9-AS1-215ENST00000588177 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 FOXO3O43524 673 aa13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 CERKQ8TCT0 537 aa13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
SOX9-AS1-215ENST00000588177 MAP2P11137 1827 aaKnown RBP13.11□□□□□ -0.31
SOX9-AS1-215ENST00000588177 PXDNQ92626 1479 aa13.11□□□□□ -0.31
SOX9-AS1-215ENST00000588177 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
SOX9-AS1-215ENST00000588177 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
SOX9-AS1-215ENST00000588177 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 NME9Q86XW9 330 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 MIER1Q8N108 512 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 COG3Q96JB2 828 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
SOX9-AS1-215ENST00000588177 OVOS2A0A0J9YW53 1432 aa13.09□□□□□ -0.31
SOX9-AS1-215ENST00000588177 FYB1O15117 783 aa13.09□□□□□ -0.31
SOX9-AS1-215ENST00000588177 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
SOX9-AS1-215ENST00000588177 OVOS2Q6IE36 1432 aa13.09□□□□□ -0.31
SOX9-AS1-215ENST00000588177 LTN1O94822 1766 aa13.09□□□□□ -0.31
SOX9-AS1-215ENST00000588177 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
SOX9-AS1-215ENST00000588177 SBNO1A3KN83 1393 aa13.08□□□□□ -0.31
SOX9-AS1-215ENST00000588177 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
SOX9-AS1-215ENST00000588177 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 ARHGEF10O15013 1369 aa13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
SOX9-AS1-215ENST00000588177 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
SOX9-AS1-215ENST00000588177 DDX17Q92841 729 aaKnown RBP13.06□□□□□ -0.32
SOX9-AS1-215ENST00000588177 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
SOX9-AS1-215ENST00000588177 CCER2I3L3R5 266 aa13.05□□□□□ -0.32
SOX9-AS1-215ENST00000588177 NLRP6P59044 892 aa13.05□□□□□ -0.32
SOX9-AS1-215ENST00000588177 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
SOX9-AS1-215ENST00000588177 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
SOX9-AS1-215ENST00000588177 SLIT3O75094 1523 aa13.04□□□□□ -0.32
SOX9-AS1-215ENST00000588177 NUTM2GQ5VZR2 741 aa13.04□□□□□ -0.32
SOX9-AS1-215ENST00000588177 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
SOX9-AS1-215ENST00000588177 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
SOX9-AS1-215ENST00000588177 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
SOX9-AS1-215ENST00000588177 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
SOX9-AS1-215ENST00000588177 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
SOX9-AS1-215ENST00000588177 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
SOX9-AS1-215ENST00000588177 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
SOX9-AS1-215ENST00000588177 SOX12O15370 315 aa13.01□□□□□ -0.33
SOX9-AS1-215ENST00000588177 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
SOX9-AS1-215ENST00000588177 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
SOX9-AS1-215ENST00000588177 NFAT5O94916 1531 aa13.01□□□□□ -0.33
SOX9-AS1-215ENST00000588177 USP19O94966 1318 aa13□□□□□ -0.33
SOX9-AS1-215ENST00000588177 KCNH5Q8NCM2 988 aa13□□□□□ -0.33
SOX9-AS1-215ENST00000588177 CFAP53Q96M91 514 aa13□□□□□ -0.33
SOX9-AS1-215ENST00000588177 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
SOX9-AS1-215ENST00000588177 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
SOX9-AS1-215ENST00000588177 HAP1P54257 671 aaPredicted RBP12.99□□□□□ -0.33
SOX9-AS1-215ENST00000588177 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
SOX9-AS1-215ENST00000588177 PPM1GO15355 546 aaPredicted RBP12.98□□□□□ -0.33
SOX9-AS1-215ENST00000588177 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
SOX9-AS1-215ENST00000588177 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
SOX9-AS1-215ENST00000588177 MTHFSP49914 203 aa12.97□□□□□ -0.33
SOX9-AS1-215ENST00000588177 ABCC6O95255 1503 aa12.97□□□□□ -0.33
SOX9-AS1-215ENST00000588177 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
SOX9-AS1-215ENST00000588177 FLT4P35916 1363 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 ZBTB7CA1YPR0 619 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 GCP02774 474 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 AMPHP49418 695 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 FAM208AQ9UK61 1670 aaKnown RBP12.95□□□□□ -0.34
SOX9-AS1-215ENST00000588177 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
SOX9-AS1-215ENST00000588177 FBLN1P23142 703 aa12.94□□□□□ -0.34
SOX9-AS1-215ENST00000588177 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
SOX9-AS1-215ENST00000588177 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
SOX9-AS1-215ENST00000588177 COL14A1Q05707 1796 aaKnown RBP12.93□□□□□ -0.34
SOX9-AS1-215ENST00000588177 JCADQ9P266 1359 aa12.93□□□□□ -0.34
SOX9-AS1-215ENST00000588177 COL18A1P39060 1754 aa12.92□□□□□ -0.34
SOX9-AS1-215ENST00000588177 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms