RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, human

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHAF1A-205	ENST00000587580	USP21	Q9UK80	565 aa		33.27	■■■□□ 2.92
CHAF1A-205	ENST00000587580	CABP1	Q9NZU7	370 aa		33.26	■■■□□ 2.91
CHAF1A-205	ENST00000587580	CRYBG1	Q9Y4K1	1723 aa		33.25	■■■□□ 2.91
CHAF1A-205	ENST00000587580	RXRB	P28702	533 aa		33.24	■■■□□ 2.91
CHAF1A-205	ENST00000587580	QTRT2	Q9H974	415 aa	Known RBP	33.24	■■■□□ 2.91
CHAF1A-205	ENST00000587580	ATAD2	Q6PL18	1390 aa		33.22	■■■□□ 2.91
CHAF1A-205	ENST00000587580	BCL9L	Q86UU0	1499 aa		33.19	■■■□□ 2.9
CHAF1A-205	ENST00000587580	SLIT2	O94813	1529 aa		33.19	■■■□□ 2.9
CHAF1A-205	ENST00000587580	PLCH1	Q4KWH8	1693 aa		33.19	■■■□□ 2.9
CHAF1A-205	ENST00000587580	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.19	■■■□□ 2.9
CHAF1A-205	ENST00000587580	TRPC5	Q9UL62	973 aa	Predicted RBP	33.18	■■■□□ 2.9
CHAF1A-205	ENST00000587580	ATRN	O75882	1429 aa		33.18	■■■□□ 2.9
CHAF1A-205	ENST00000587580	USP6	P35125	1406 aa		33.18	■■■□□ 2.9
CHAF1A-205	ENST00000587580	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.17	■■■□□ 2.9
CHAF1A-205	ENST00000587580	ST20-MTHFS	A0A0A6YYL1	179 aa		33.17	■■■□□ 2.9
CHAF1A-205	ENST00000587580	RBM6	P78332	1123 aa	Known RBP	33.17	■■■□□ 2.9
CHAF1A-205	ENST00000587580	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.16	■■■□□ 2.9
CHAF1A-205	ENST00000587580	AKAP12	Q02952	1782 aa		33.16	■■■□□ 2.9
CHAF1A-205	ENST00000587580	BRD4	O60885	1362 aa	Predicted RBP	33.15	■■■□□ 2.9
CHAF1A-205	ENST00000587580	NUTM2G	Q5VZR2	741 aa		33.15	■■■□□ 2.9
CHAF1A-205	ENST00000587580	USP47	Q96K76	1375 aa		33.15	■■■□□ 2.9
CHAF1A-205	ENST00000587580	ABTB2	Q8N961	1025 aa		33.13	■■■□□ 2.89
CHAF1A-205	ENST00000587580	NWD2	Q9ULI1	1742 aa		33.13	■■■□□ 2.89
CHAF1A-205	ENST00000587580	TESK2	Q96S53	571 aa		33.12	■■■□□ 2.89
CHAF1A-205	ENST00000587580	UNC5CL	Q8IV45	518 aa		33.11	■■■□□ 2.89
CHAF1A-205	ENST00000587580	COL14A1	Q05707	1796 aa	Known RBP	33.1	■■■□□ 2.89
CHAF1A-205	ENST00000587580	RGS12	O14924	1447 aa		33.1	■■■□□ 2.89
CHAF1A-205	ENST00000587580	FAM83G	A6ND36	823 aa		33.08	■■■□□ 2.89
CHAF1A-205	ENST00000587580	NRK	Q7Z2Y5	1582 aa		33.08	■■■□□ 2.89
CHAF1A-205	ENST00000587580	CPSF1	Q10570	1443 aa	Known RBP	33.07	■■■□□ 2.88
CHAF1A-205	ENST00000587580	SSH2	Q76I76	1423 aa		33.07	■■■□□ 2.88
CHAF1A-205	ENST00000587580	ZNF692	Q9BU19	519 aa	Predicted RBP	33.06	■■■□□ 2.88
CHAF1A-205	ENST00000587580	MON2	Q7Z3U7	1717 aa		33.05	■■■□□ 2.88
CHAF1A-205	ENST00000587580	NRAP	Q86VF7	1730 aa		33.05	■■■□□ 2.88
CHAF1A-205	ENST00000587580	USP19	O94966	1318 aa		33.04	■■■□□ 2.88
CHAF1A-205	ENST00000587580	PIK3C2A	O00443	1686 aa		33.04	■■■□□ 2.88
CHAF1A-205	ENST00000587580	SLC24A1	O60721	1099 aa		33.04	■■■□□ 2.88
CHAF1A-205	ENST00000587580	NLRP13	Q86W25	1043 aa		33.04	■■■□□ 2.88
CHAF1A-205	ENST00000587580	TMC1	Q8TDI8	760 aa		33.04	■■■□□ 2.88
CHAF1A-205	ENST00000587580	PUS7	Q96PZ0	661 aa	Known RBP	33.03	■■■□□ 2.88
CHAF1A-205	ENST00000587580	PRDM11	Q9NQV5	511 aa		33.03	■■■□□ 2.88
CHAF1A-205	ENST00000587580	KTN1	Q86UP2	1357 aa	Known RBP	33.03	■■■□□ 2.88
CHAF1A-205	ENST00000587580	KIAA0232	Q92628	1395 aa		33.02	■■■□□ 2.88
CHAF1A-205	ENST00000587580	GJD4	Q96KN9	370 aa	Predicted RBP	33.02	■■■□□ 2.88
CHAF1A-205	ENST00000587580	CD163L1	Q9NR16	1453 aa		33.01	■■■□□ 2.88
CHAF1A-205	ENST00000587580	TTC21B	Q7Z4L5	1316 aa		33.01	■■■□□ 2.87
CHAF1A-205	ENST00000587580	GLI3	P10071	1580 aa		33	■■■□□ 2.87
CHAF1A-205	ENST00000587580	ZC3H6	P61129	1189 aa	Known RBP	33	■■■□□ 2.87
CHAF1A-205	ENST00000587580	BTG4	Q9NY30	223 aa		33	■■■□□ 2.87
CHAF1A-205	ENST00000587580	NLRP6	P59044	892 aa		32.99	■■■□□ 2.87
CHAF1A-205	ENST00000587580	VPS72	Q15906	364 aa		32.98	■■■□□ 2.87
CHAF1A-205	ENST00000587580	SLC12A5	Q9H2X9	1139 aa		32.98	■■■□□ 2.87
CHAF1A-205	ENST00000587580	TMF1	P82094	1093 aa		32.97	■■■□□ 2.87
CHAF1A-205	ENST00000587580	TTC21A	Q8NDW8	1320 aa		32.97	■■■□□ 2.87
CHAF1A-205	ENST00000587580	SLIT3	O75094	1523 aa		32.97	■■■□□ 2.87
CHAF1A-205	ENST00000587580	CHRNA2	Q15822	529 aa		32.96	■■■□□ 2.87
CHAF1A-205	ENST00000587580	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.96	■■■□□ 2.87
CHAF1A-205	ENST00000587580	CCDC9	Q9Y3X0	531 aa	Known RBP	32.95	■■■□□ 2.87
CHAF1A-205	ENST00000587580	NINL	Q9Y2I6	1382 aa		32.95	■■■□□ 2.86
CHAF1A-205	ENST00000587580	GC	P02774	474 aa		32.94	■■■□□ 2.86
CHAF1A-205	ENST00000587580		A0A1W2PP64	1363 aa		32.93	■■■□□ 2.86
CHAF1A-205	ENST00000587580	CPD	O75976	1380 aa		32.93	■■■□□ 2.86
CHAF1A-205	ENST00000587580	TERF2IP	Q9NYB0	399 aa		32.92	■■■□□ 2.86
CHAF1A-205	ENST00000587580	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.9	■■■□□ 2.86
CHAF1A-205	ENST00000587580	EDC4	Q6P2E9	1401 aa	Known RBP	32.89	■■■□□ 2.86
CHAF1A-205	ENST00000587580	LMO7	Q8WWI1	1683 aa		32.88	■■■□□ 2.85
CHAF1A-205	ENST00000587580	CDCA8	Q53HL2	280 aa		32.85	■■■□□ 2.85
CHAF1A-205	ENST00000587580	USP54	Q70EL1	1684 aa		32.85	■■■□□ 2.85
CHAF1A-205	ENST00000587580	ZBTB7C	A1YPR0	619 aa		32.84	■■■□□ 2.85
CHAF1A-205	ENST00000587580	STRN4	Q9NRL3	753 aa		32.84	■■■□□ 2.85
CHAF1A-205	ENST00000587580	CAMTA1	Q9Y6Y1	1673 aa		32.84	■■■□□ 2.85
CHAF1A-205	ENST00000587580	NME9	Q86XW9	330 aa		32.83	■■■□□ 2.85
CHAF1A-205	ENST00000587580	USP31	Q70CQ4	1352 aa		32.82	■■■□□ 2.84
CHAF1A-205	ENST00000587580	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.81	■■■□□ 2.84
CHAF1A-205	ENST00000587580	KCNH5	Q8NCM2	988 aa		32.81	■■■□□ 2.84
CHAF1A-205	ENST00000587580	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.81	■■■□□ 2.84
CHAF1A-205	ENST00000587580	ZRANB1	Q9UGI0	708 aa		32.81	■■■□□ 2.84
CHAF1A-205	ENST00000587580	ANKRD36B	Q8N2N9	1353 aa		32.81	■■■□□ 2.84
CHAF1A-205	ENST00000587580	SPATA31A5	Q5VU36	1347 aa		32.8	■■■□□ 2.84
CHAF1A-205	ENST00000587580	SPATA31A7	Q8IWB4	1347 aa		32.8	■■■□□ 2.84
CHAF1A-205	ENST00000587580	SOX12	O15370	315 aa		32.8	■■■□□ 2.84
CHAF1A-205	ENST00000587580	BRWD3	Q6RI45	1802 aa		32.79	■■■□□ 2.84
CHAF1A-205	ENST00000587580	NFAT5	O94916	1531 aa		32.79	■■■□□ 2.84
CHAF1A-205	ENST00000587580	MYOM1	P52179	1685 aa		32.78	■■■□□ 2.84
CHAF1A-205	ENST00000587580	EVA1C	P58658	441 aa		32.78	■■■□□ 2.84
CHAF1A-205	ENST00000587580	SEPT12	Q8IYM1	358 aa		32.78	■■■□□ 2.84
CHAF1A-205	ENST00000587580	HSPA5	P11021	654 aa	Known RBP	32.77	■■■□□ 2.84
CHAF1A-205	ENST00000587580	FAM98C	Q17RN3	349 aa	Known RBP	32.77	■■■□□ 2.84
CHAF1A-205	ENST00000587580	AATK	Q6ZMQ8	1374 aa		32.77	■■■□□ 2.84
CHAF1A-205	ENST00000587580	COL5A2	P05997	1499 aa	Predicted RBP	32.76	■■■□□ 2.84
CHAF1A-205	ENST00000587580		A0A0G2JS52	829 aa		32.76	■■■□□ 2.83
CHAF1A-205	ENST00000587580	ONECUT3	O60422	494 aa	Predicted RBP	32.76	■■■□□ 2.83
CHAF1A-205	ENST00000587580	MYT1	Q01538	1121 aa		32.76	■■■□□ 2.83
CHAF1A-205	ENST00000587580	COL18A1	P39060	1754 aa		32.75	■■■□□ 2.83
CHAF1A-205	ENST00000587580	SPATA31A1	Q5TZJ5	1347 aa		32.75	■■■□□ 2.83
CHAF1A-205	ENST00000587580	ARHGEF25	Q86VW2	580 aa		32.73	■■■□□ 2.83
CHAF1A-205	ENST00000587580	OVOS2	A0A0J9YW53	1432 aa		32.73	■■■□□ 2.83
CHAF1A-205	ENST00000587580	OVOS2	Q6IE36	1432 aa		32.73	■■■□□ 2.83
CHAF1A-205	ENST00000587580	LARP1	Q6PKG0	1096 aa	Known RBP	32.71	■■■□□ 2.83
CHAF1A-205	ENST00000587580	THSD7A	Q9UPZ6	1657 aa		32.71	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms