RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
CALR-204ENST00000586967 KRT28Q7Z3Y7 464 aa20.04■□□□□ 0.8
CALR-204ENST00000586967 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
CALR-204ENST00000586967 SSH2Q76I76 1423 aa20.03■□□□□ 0.8
CALR-204ENST00000586967 ANKRD26Q9UPS8 1709 aa20.03■□□□□ 0.8
CALR-204ENST00000586967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
CALR-204ENST00000586967 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
CALR-204ENST00000586967 SBNO1A3KN83 1393 aa20.02■□□□□ 0.8
CALR-204ENST00000586967 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.79
CALR-204ENST00000586967 CC2D1BQ5T0F9 858 aaKnown RBP20.01■□□□□ 0.79
CALR-204ENST00000586967 FYB1O15117 783 aa20■□□□□ 0.79
CALR-204ENST00000586967 MORC1Q86VD1 984 aa20■□□□□ 0.79
CALR-204ENST00000586967 COG3Q96JB2 828 aa20■□□□□ 0.79
CALR-204ENST00000586967 PRKRIP1Q9H875 184 aaPredicted RBP20■□□□□ 0.79
CALR-204ENST00000586967 TRPM3Q9HCF6 1732 aaPredicted RBP19.99■□□□□ 0.79
CALR-204ENST00000586967 AHDC1Q5TGY3 1603 aaPredicted RBP19.99■□□□□ 0.79
CALR-204ENST00000586967 PXDNQ92626 1479 aa19.99■□□□□ 0.79
CALR-204ENST00000586967 ARHGEF10O15013 1369 aa19.98■□□□□ 0.79
CALR-204ENST00000586967 PARD3Q8TEW0 1356 aa19.98■□□□□ 0.79
CALR-204ENST00000586967 ABTB2Q8N961 1025 aa19.98■□□□□ 0.79
CALR-204ENST00000586967 SOS2Q07890 1332 aaPredicted RBP19.98■□□□□ 0.79
CALR-204ENST00000586967 USP31Q70CQ4 1352 aa19.97■□□□□ 0.79
CALR-204ENST00000586967 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
CALR-204ENST00000586967 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
CALR-204ENST00000586967 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
CALR-204ENST00000586967 TNS3Q68CZ2 1445 aa19.96■□□□□ 0.79
CALR-204ENST00000586967 PIP4K2BP78356 416 aa19.96■□□□□ 0.79
CALR-204ENST00000586967 NME9Q86XW9 330 aa19.96■□□□□ 0.79
CALR-204ENST00000586967 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
CALR-204ENST00000586967 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
CALR-204ENST00000586967 NLRP6P59044 892 aa19.95■□□□□ 0.78
CALR-204ENST00000586967 MYBBP1AQ9BQG0 1328 aaKnown RBP19.95■□□□□ 0.78
CALR-204ENST00000586967 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
CALR-204ENST00000586967 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
CALR-204ENST00000586967 SPATA31A3Q5VYP0 1347 aa19.94■□□□□ 0.78
CALR-204ENST00000586967 ALS2Q96Q42 1657 aa19.94■□□□□ 0.78
CALR-204ENST00000586967 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
CALR-204ENST00000586967 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
CALR-204ENST00000586967 LRRC59Q96AG4 307 aaKnown RBP19.93■□□□□ 0.78
CALR-204ENST00000586967 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
CALR-204ENST00000586967 KCNH5Q8NCM2 988 aa19.92■□□□□ 0.78
CALR-204ENST00000586967 PHLPP1O60346 1717 aa19.92■□□□□ 0.78
CALR-204ENST00000586967 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
CALR-204ENST00000586967 CCER2I3L3R5 266 aa19.9■□□□□ 0.78
CALR-204ENST00000586967 AATKQ6ZMQ8 1374 aa19.9■□□□□ 0.78
CALR-204ENST00000586967 MIER1Q8N108 512 aa19.88■□□□□ 0.77
CALR-204ENST00000586967 MED1Q15648 1581 aaPredicted RBP19.87■□□□□ 0.77
CALR-204ENST00000586967 USP19O94966 1318 aa19.86■□□□□ 0.77
CALR-204ENST00000586967 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
CALR-204ENST00000586967 COL16A1Q07092 1604 aaPredicted RBP19.86■□□□□ 0.77
CALR-204ENST00000586967 TNNT2P45379 298 aaPredicted RBP19.85■□□□□ 0.77
CALR-204ENST00000586967 NUTM2GQ5VZR2 741 aa19.85■□□□□ 0.77
CALR-204ENST00000586967 CFAP53Q96M91 514 aa19.85■□□□□ 0.77
CALR-204ENST00000586967 ZRANB1Q9UGI0 708 aa19.85■□□□□ 0.77
CALR-204ENST00000586967 SLIT3O75094 1523 aa19.85■□□□□ 0.77
CALR-204ENST00000586967 MARF1Q9Y4F3 1742 aaKnown RBP19.84■□□□□ 0.77
CALR-204ENST00000586967 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.77
CALR-204ENST00000586967 HAP1P54257 671 aaPredicted RBP19.82■□□□□ 0.76
CALR-204ENST00000586967 COL22A1Q8NFW1 1626 aaPredicted RBP19.82■□□□□ 0.76
CALR-204ENST00000586967 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
CALR-204ENST00000586967 PHRF1Q9P1Y6 1649 aaKnown RBP19.81■□□□□ 0.76
CALR-204ENST00000586967 GCP02774 474 aa19.81■□□□□ 0.76
CALR-204ENST00000586967 SMG6Q86US8 1419 aaKnown RBP19.8■□□□□ 0.76
CALR-204ENST00000586967 MTHFSP49914 203 aa19.79■□□□□ 0.76
CALR-204ENST00000586967 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
CALR-204ENST00000586967 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
CALR-204ENST00000586967 PNPLA6Q8IY17 1366 aa19.79■□□□□ 0.76
CALR-204ENST00000586967 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
CALR-204ENST00000586967 NFAT5O94916 1531 aa19.78■□□□□ 0.76
CALR-204ENST00000586967 SOX12O15370 315 aa19.78■□□□□ 0.76
CALR-204ENST00000586967 POLKQ9UBT6 870 aa19.78■□□□□ 0.76
CALR-204ENST00000586967 JCADQ9P266 1359 aa19.78■□□□□ 0.76
CALR-204ENST00000586967 CDK12Q9NYV4 1490 aaPredicted RBP19.78■□□□□ 0.76
CALR-204ENST00000586967 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
CALR-204ENST00000586967 AMPHP49418 695 aa19.77■□□□□ 0.76
CALR-204ENST00000586967 ABCC6O95255 1503 aa19.76■□□□□ 0.75
CALR-204ENST00000586967 LTN1O94822 1766 aa19.76■□□□□ 0.75
CALR-204ENST00000586967 FLT4P35916 1363 aa19.76■□□□□ 0.75
CALR-204ENST00000586967 ABCA3Q99758 1704 aa19.76■□□□□ 0.75
CALR-204ENST00000586967 CPDO75976 1380 aa19.75■□□□□ 0.75
CALR-204ENST00000586967 INSRP06213 1382 aa19.75■□□□□ 0.75
CALR-204ENST00000586967 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
CALR-204ENST00000586967 MAP3K19Q56UN5 1328 aa19.75■□□□□ 0.75
CALR-204ENST00000586967 RRS1Q15050 365 aaKnown RBP19.74■□□□□ 0.75
CALR-204ENST00000586967 NUDCQ9Y266 331 aa19.74■□□□□ 0.75
CALR-204ENST00000586967 ARHGEF25Q86VW2 580 aa19.73■□□□□ 0.75
CALR-204ENST00000586967 EMILIN1Q9Y6C2 1016 aa19.73■□□□□ 0.75
CALR-204ENST00000586967 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
CALR-204ENST00000586967 PLEKHG5O94827 1062 aa19.72■□□□□ 0.75
CALR-204ENST00000586967 BLMP54132 1417 aaPredicted RBP19.72■□□□□ 0.75
CALR-204ENST00000586967 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
CALR-204ENST00000586967 WDR43Q15061 677 aaKnown RBP eCLIP19.71■□□□□ 0.754e-44■□□□□ 10.6
CALR-204ENST00000586967 FBXO41Q8TF61 875 aa19.71■□□□□ 0.75
CALR-204ENST00000586967 IP6K1Q92551 441 aa19.71■□□□□ 0.75
CALR-204ENST00000586967 DIAPH1O60610 1272 aaKnown RBP19.7■□□□□ 0.74
CALR-204ENST00000586967 HSPA1LP34931 641 aa19.7■□□□□ 0.74
CALR-204ENST00000586967 ZC3H6P61129 1189 aaKnown RBP19.7■□□□□ 0.74
CALR-204ENST00000586967 PRDM11Q9NQV5 511 aa19.7■□□□□ 0.74
CALR-204ENST00000586967 FBLN1P23142 703 aa19.69■□□□□ 0.74
CALR-204ENST00000586967 HOXC9P31274 260 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms