RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 SPATA31A7Q8IWB4 1347 aa11.71□□□□□ -0.53
CAPNS1-203ENST00000586963 ABCA3Q99758 1704 aa11.71□□□□□ -0.54
CAPNS1-203ENST00000586963 PLCH1Q4KWH8 1693 aa11.71□□□□□ -0.54
CAPNS1-203ENST00000586963 A0A0G2JS52 829 aa11.7□□□□□ -0.54
CAPNS1-203ENST00000586963 MYT1Q01538 1121 aa11.7□□□□□ -0.54
CAPNS1-203ENST00000586963 CDK19Q9BWU1 502 aa11.7□□□□□ -0.54
CAPNS1-203ENST00000586963 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
CAPNS1-203ENST00000586963 ALS2Q96Q42 1657 aa11.7□□□□□ -0.54
CAPNS1-203ENST00000586963 BRWD3Q6RI45 1802 aa11.7□□□□□ -0.54
CAPNS1-203ENST00000586963 BAG6P46379 1132 aa11.69□□□□□ -0.54
CAPNS1-203ENST00000586963 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
CAPNS1-203ENST00000586963 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
CAPNS1-203ENST00000586963 ATP7BP35670 1465 aa11.69□□□□□ -0.54
CAPNS1-203ENST00000586963 PLEKHG3A1L390 1219 aa11.68□□□□□ -0.54
CAPNS1-203ENST00000586963 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
CAPNS1-203ENST00000586963 NRAPQ86VF7 1730 aa11.67□□□□□ -0.54
CAPNS1-203ENST00000586963 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
CAPNS1-203ENST00000586963 KIAA0232Q92628 1395 aa11.67□□□□□ -0.54
CAPNS1-203ENST00000586963 ACEP12821 1306 aa11.66□□□□□ -0.54
CAPNS1-203ENST00000586963 SPATA31A1Q5TZJ5 1347 aa11.66□□□□□ -0.54
CAPNS1-203ENST00000586963 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
CAPNS1-203ENST00000586963 CHRNA2Q15822 529 aa11.65□□□□□ -0.54
CAPNS1-203ENST00000586963 ARHGEF28Q8N1W1 1705 aaKnown RBP11.64□□□□□ -0.55
CAPNS1-203ENST00000586963 NBPF1Q3BBV0 1214 aa11.64□□□□□ -0.55
CAPNS1-203ENST00000586963 FAM182BQ5T319 152 aa11.64□□□□□ -0.55
CAPNS1-203ENST00000586963 CRYBG1Q9Y4K1 1723 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 NUTM2GQ5VZR2 741 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 FAM196AQ6ZSG2 479 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 ABTB2Q8N961 1025 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 ITSN1Q15811 1721 aa11.63□□□□□ -0.55
CAPNS1-203ENST00000586963 EVA1CP58658 441 aa11.62□□□□□ -0.55
CAPNS1-203ENST00000586963 CPDO75976 1380 aa11.62□□□□□ -0.55
CAPNS1-203ENST00000586963 THSD7AQ9UPZ6 1657 aa11.62□□□□□ -0.55
CAPNS1-203ENST00000586963 USP19O94966 1318 aa11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 CENPJQ9HC77 1338 aaPredicted RBP11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 KIAA1210Q9ULL0 1709 aa11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 PSDA5PKW4 1024 aaPredicted RBP11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 NLRP13Q86W25 1043 aa11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
CAPNS1-203ENST00000586963 GCP02774 474 aa11.6□□□□□ -0.55
CAPNS1-203ENST00000586963 CAMKK2Q96RR4 588 aa11.6□□□□□ -0.55
CAPNS1-203ENST00000586963 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
CAPNS1-203ENST00000586963 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
CAPNS1-203ENST00000586963 TRIM37O94972 964 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 EZH2Q15910 746 aaKnown RBP11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 PPIP5K1Q6PFW1 1433 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
CAPNS1-203ENST00000586963 PARD3Q8TEW0 1356 aa11.58□□□□□ -0.56
CAPNS1-203ENST00000586963 LRP5O75197 1615 aa11.58□□□□□ -0.56
CAPNS1-203ENST00000586963 PHRF1Q9P1Y6 1649 aaKnown RBP11.58□□□□□ -0.56
CAPNS1-203ENST00000586963 R3HDM1Q15032 1099 aaKnown RBP11.58□□□□□ -0.56
CAPNS1-203ENST00000586963 CAMTA1Q9Y6Y1 1673 aa11.58□□□□□ -0.56
CAPNS1-203ENST00000586963 RGPD1P0DJD0 1748 aa11.57□□□□□ -0.56
CAPNS1-203ENST00000586963 C11orf95C9JLR9 678 aaPredicted RBP11.57□□□□□ -0.56
CAPNS1-203ENST00000586963 APBA3O96018 575 aa11.57□□□□□ -0.56
CAPNS1-203ENST00000586963 CABP1Q9NZU7 370 aa11.57□□□□□ -0.56
CAPNS1-203ENST00000586963 NLRP6P59044 892 aa11.56□□□□□ -0.56
CAPNS1-203ENST00000586963 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
CAPNS1-203ENST00000586963 L3MBTL2Q969R5 705 aa11.56□□□□□ -0.56
CAPNS1-203ENST00000586963 USP6P35125 1406 aa11.55□□□□□ -0.56
CAPNS1-203ENST00000586963 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
CAPNS1-203ENST00000586963 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
CAPNS1-203ENST00000586963 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
CAPNS1-203ENST00000586963 LMO7Q8WWI1 1683 aa11.54□□□□□ -0.56
CAPNS1-203ENST00000586963 COL5A2P05997 1499 aaPredicted RBP11.53□□□□□ -0.56
CAPNS1-203ENST00000586963 TNS1Q9HBL0 1735 aaKnown RBP11.53□□□□□ -0.56
CAPNS1-203ENST00000586963 CRB1P82279 1406 aa11.52□□□□□ -0.56
CAPNS1-203ENST00000586963 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
CAPNS1-203ENST00000586963 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
CAPNS1-203ENST00000586963 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
CAPNS1-203ENST00000586963 SLIT3O75094 1523 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 PLSCR1O15162 318 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 DDB1Q16531 1140 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 TOM1L2Q6ZVM7 507 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 CDCA7Q9BWT1 371 aaPredicted RBP11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 AXIN2Q9Y2T1 843 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 TTC21BQ7Z4L5 1316 aa11.5□□□□□ -0.57
CAPNS1-203ENST00000586963 WDR17Q8IZU2 1322 aa11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 ROCK2O75116 1388 aaKnown RBP11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 OVOS2A0A0G2JMS6 1433 aa11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
CAPNS1-203ENST00000586963 CARD10Q9BWT7 1032 aa11.48□□□□□ -0.57
CAPNS1-203ENST00000586963 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
CAPNS1-203ENST00000586963 BCL9O00512 1426 aa11.47□□□□□ -0.57
CAPNS1-203ENST00000586963 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms