RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-209	ENST00000586555	NBPF8	Q3BBV2	869 aa		29.36	■■■□□ 2.29
CIRBP-209	ENST00000586555	NUDT16	Q96DE0	195 aa	Known RBP	29.36	■■■□□ 2.29
CIRBP-209	ENST00000586555	ATP7B	P35670	1465 aa		29.36	■■■□□ 2.29
CIRBP-209	ENST00000586555	ONECUT3	O60422	494 aa	Predicted RBP	29.34	■■■□□ 2.29
CIRBP-209	ENST00000586555	NGDN	Q8NEJ9	315 aa	Known RBP	29.34	■■■□□ 2.29
CIRBP-209	ENST00000586555	ITSN1	Q15811	1721 aa		29.34	■■■□□ 2.29
CIRBP-209	ENST00000586555	CCDC125	Q86Z20	511 aa		29.33	■■■□□ 2.29
CIRBP-209	ENST00000586555	CLSPN	Q9HAW4	1339 aa		29.32	■■■□□ 2.28
CIRBP-209	ENST00000586555	BRWD3	Q6RI45	1802 aa		29.31	■■■□□ 2.28
CIRBP-209	ENST00000586555	SRPK2	P78362	688 aa	Known RBP	29.31	■■■□□ 2.28
CIRBP-209	ENST00000586555	CARD11	Q9BXL7	1154 aa		29.3	■■■□□ 2.28
CIRBP-209	ENST00000586555	CCDC61	Q9Y6R9	512 aa		29.3	■■■□□ 2.28
CIRBP-209	ENST00000586555	CRYBG1	Q9Y4K1	1723 aa		29.3	■■■□□ 2.28
CIRBP-209	ENST00000586555	QRICH2	Q9H0J4	1663 aa		29.3	■■■□□ 2.28
CIRBP-209	ENST00000586555	SEPT12	Q8IYM1	358 aa		29.28	■■■□□ 2.28
CIRBP-209	ENST00000586555	NRAP	Q86VF7	1730 aa		29.27	■■■□□ 2.28
CIRBP-209	ENST00000586555	EVC2	Q86UK5	1308 aa		29.26	■■■□□ 2.27
CIRBP-209	ENST00000586555	PAK3	O75914	559 aa	Predicted RBP	29.26	■■■□□ 2.27
CIRBP-209	ENST00000586555	COL14A1	Q05707	1796 aa	Known RBP	29.26	■■■□□ 2.27
CIRBP-209	ENST00000586555	POLR3A	O14802	1390 aa	Predicted RBP	29.26	■■■□□ 2.27
CIRBP-209	ENST00000586555	TOPAZ1	Q8N9V7	1692 aa		29.25	■■■□□ 2.27
CIRBP-209	ENST00000586555	PLEKHG3	A1L390	1219 aa		29.25	■■■□□ 2.27
CIRBP-209	ENST00000586555	BTG4	Q9NY30	223 aa		29.25	■■■□□ 2.27
CIRBP-209	ENST00000586555	TIMELESS	Q9UNS1	1208 aa		29.25	■■■□□ 2.27
CIRBP-209	ENST00000586555	CCDC9	Q9Y3X0	531 aa	Known RBP	29.23	■■■□□ 2.27
CIRBP-209	ENST00000586555	CABP2	Q9NPB3	220 aa		29.22	■■■□□ 2.27
CIRBP-209	ENST00000586555	ACE	P12821	1306 aa		29.21	■■■□□ 2.27
CIRBP-209	ENST00000586555	BLM	P54132	1417 aa	Predicted RBP	29.19	■■■□□ 2.26
CIRBP-209	ENST00000586555	CCER1	Q8TC90	406 aa	Predicted RBP	29.18	■■■□□ 2.26
CIRBP-209	ENST00000586555	PPIP5K1	Q6PFW1	1433 aa		29.17	■■■□□ 2.26
CIRBP-209	ENST00000586555	KRT27	Q7Z3Y8	459 aa		29.16	■■■□□ 2.26
CIRBP-209	ENST00000586555	PRDM11	Q9NQV5	511 aa		29.15	■■■□□ 2.26
CIRBP-209	ENST00000586555	SPATA31A5	Q5VU36	1347 aa		29.15	■■■□□ 2.26
CIRBP-209	ENST00000586555	SPATA31A7	Q8IWB4	1347 aa		29.15	■■■□□ 2.26
CIRBP-209	ENST00000586555	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.14	■■■□□ 2.26
CIRBP-209	ENST00000586555	SBNO2	Q9Y2G9	1366 aa		29.13	■■■□□ 2.25
CIRBP-209	ENST00000586555	FAM98C	Q17RN3	349 aa	Known RBP	29.13	■■■□□ 2.25
CIRBP-209	ENST00000586555	KIAA0232	Q92628	1395 aa		29.13	■■■□□ 2.25
CIRBP-209	ENST00000586555	CABP1	Q9NZU7	370 aa		29.12	■■■□□ 2.25
CIRBP-209	ENST00000586555	ZRANB1	Q9UGI0	708 aa		29.12	■■■□□ 2.25
CIRBP-209	ENST00000586555	SLC24A1	O60721	1099 aa		29.11	■■■□□ 2.25
CIRBP-209	ENST00000586555	NUTM2G	Q5VZR2	741 aa		29.1	■■■□□ 2.25
CIRBP-209	ENST00000586555	SRCAP	Q6ZRS2	3230 aa		29.09	■■■□□ 2.25
CIRBP-209	ENST00000586555	ZC3H6	P61129	1189 aa	Known RBP	29.08	■■■□□ 2.25
CIRBP-209	ENST00000586555	BRD4	O60885	1362 aa	Predicted RBP	29.08	■■■□□ 2.25
CIRBP-209	ENST00000586555	CHRNA2	Q15822	529 aa		29.07	■■■□□ 2.24
CIRBP-209	ENST00000586555	DEFB132	Q7Z7B7	95 aa		29.07	■■■□□ 2.24
CIRBP-209	ENST00000586555	ABTB2	Q8N961	1025 aa		29.07	■■■□□ 2.24
CIRBP-209	ENST00000586555	USP19	O94966	1318 aa		29.06	■■■□□ 2.24
CIRBP-209	ENST00000586555	SPATA31A1	Q5TZJ5	1347 aa		29.05	■■■□□ 2.24
CIRBP-209	ENST00000586555	ZNF692	Q9BU19	519 aa	Predicted RBP	29.05	■■■□□ 2.24
CIRBP-209	ENST00000586555	THSD7A	Q9UPZ6	1657 aa		29.05	■■■□□ 2.24
CIRBP-209	ENST00000586555		A0A0G2JS52	829 aa		29.04	■■■□□ 2.24
CIRBP-209	ENST00000586555	MYT1	Q01538	1121 aa		29.04	■■■□□ 2.24
CIRBP-209	ENST00000586555	SF3B2	Q13435	895 aa	Known RBP	29.04	■■■□□ 2.24
CIRBP-209	ENST00000586555	NRK	Q7Z2Y5	1582 aa		29.04	■■■□□ 2.24
CIRBP-209	ENST00000586555	CPD	O75976	1380 aa		29.02	■■■□□ 2.24
CIRBP-209	ENST00000586555	NLRP13	Q86W25	1043 aa		29.02	■■■□□ 2.24
CIRBP-209	ENST00000586555	ST20-MTHFS	A0A0A6YYL1	179 aa		29.01	■■■□□ 2.23
CIRBP-209	ENST00000586555	STRN4	Q9NRL3	753 aa		29	■■■□□ 2.23
CIRBP-209	ENST00000586555	PUS7	Q96PZ0	661 aa	Known RBP	28.99	■■■□□ 2.23
CIRBP-209	ENST00000586555	USP6	P35125	1406 aa		28.99	■■■□□ 2.23
CIRBP-209	ENST00000586555	CAMTA1	Q9Y6Y1	1673 aa		28.99	■■■□□ 2.23
CIRBP-209	ENST00000586555	GC	P02774	474 aa		28.98	■■■□□ 2.23
CIRBP-209	ENST00000586555	LMO7	Q8WWI1	1683 aa		28.98	■■■□□ 2.23
CIRBP-209	ENST00000586555	SSH2	Q76I76	1423 aa		28.97	■■■□□ 2.23
CIRBP-209	ENST00000586555	FAM182B	Q5T319	152 aa		28.95	■■■□□ 2.22
CIRBP-209	ENST00000586555	USP47	Q96K76	1375 aa		28.95	■■■□□ 2.22
CIRBP-209	ENST00000586555	EVA1C	P58658	441 aa		28.94	■■■□□ 2.22
CIRBP-209	ENST00000586555	BARGIN	Q6ZT62	677 aa		28.94	■■■□□ 2.22
CIRBP-209	ENST00000586555	TMC1	Q8TDI8	760 aa		28.94	■■■□□ 2.22
CIRBP-209	ENST00000586555	BAG6	P46379	1132 aa		28.93	■■■□□ 2.22
CIRBP-209	ENST00000586555	TESK2	Q96S53	571 aa		28.93	■■■□□ 2.22
CIRBP-209	ENST00000586555	RGPD1	P0DJD0	1748 aa		28.91	■■■□□ 2.22
CIRBP-209	ENST00000586555	KTN1	Q86UP2	1357 aa	Known RBP	28.91	■■■□□ 2.22
CIRBP-209	ENST00000586555	NLRP6	P59044	892 aa		28.91	■■■□□ 2.22
CIRBP-209	ENST00000586555	LARP1	Q6PKG0	1096 aa	Known RBP	28.91	■■■□□ 2.22
CIRBP-209	ENST00000586555	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.91	■■■□□ 2.22
CIRBP-209	ENST00000586555	TMF1	P82094	1093 aa		28.9	■■■□□ 2.22
CIRBP-209	ENST00000586555	CPSF1	Q10570	1443 aa	Known RBP	28.9	■■■□□ 2.22
CIRBP-209	ENST00000586555	SLIT3	O75094	1523 aa		28.89	■■■□□ 2.22
CIRBP-209	ENST00000586555	AKAP12	Q02952	1782 aa		28.89	■■■□□ 2.22
CIRBP-209	ENST00000586555	TERF2IP	Q9NYB0	399 aa		28.89	■■■□□ 2.22
CIRBP-209	ENST00000586555	TTC21A	Q8NDW8	1320 aa		28.89	■■■□□ 2.21
CIRBP-209	ENST00000586555	USP35	Q9P2H5	1018 aa		28.88	■■■□□ 2.21
CIRBP-209	ENST00000586555	TTC21B	Q7Z4L5	1316 aa		28.88	■■■□□ 2.21
CIRBP-209	ENST00000586555	PIK3C2A	O00443	1686 aa		28.87	■■■□□ 2.21
CIRBP-209	ENST00000586555	TCP11L2	Q8N4U5	519 aa		28.87	■■■□□ 2.21
CIRBP-209	ENST00000586555	DISP2	A7MBM2	1401 aa		28.86	■■■□□ 2.21
CIRBP-209	ENST00000586555	EN1	Q05925	392 aa	Predicted RBP	28.86	■■■□□ 2.21
CIRBP-209	ENST00000586555	CDCA8	Q53HL2	280 aa		28.86	■■■□□ 2.21
CIRBP-209	ENST00000586555	FAM196A	Q6ZSG2	479 aa		28.86	■■■□□ 2.21
CIRBP-209	ENST00000586555	THRAP3	Q9Y2W1	955 aa	Known RBP	28.86	■■■□□ 2.21
CIRBP-209	ENST00000586555	NINL	Q9Y2I6	1382 aa		28.86	■■■□□ 2.21
CIRBP-209	ENST00000586555	COL5A2	P05997	1499 aa	Predicted RBP	28.85	■■■□□ 2.21
CIRBP-209	ENST00000586555	SLC12A5	Q9H2X9	1139 aa		28.85	■■■□□ 2.21
CIRBP-209	ENST00000586555	TNS1	Q9HBL0	1735 aa	Known RBP	28.85	■■■□□ 2.21
CIRBP-209	ENST00000586555	AATK	Q6ZMQ8	1374 aa		28.85	■■■□□ 2.21
CIRBP-209	ENST00000586555	COL18A1	P39060	1754 aa		28.83	■■■□□ 2.21
CIRBP-209	ENST00000586555	KCNH5	Q8NCM2	988 aa		28.8	■■■□□ 2.2

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