RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 PLEKHG3A1L390 1219 aa22.71■■□□□ 1.23
ATG4D-205ENST00000586477 PLEKHG5O94827 1062 aa22.71■■□□□ 1.23
ATG4D-205ENST00000586477 LMOD2Q6P5Q4 547 aa22.71■■□□□ 1.23
ATG4D-205ENST00000586477 UPF1Q92900 1129 aaKnown RBP eCLIP22.71■■□□□ 1.23
ATG4D-205ENST00000586477 CCDC61Q9Y6R9 512 aa22.71■■□□□ 1.23
ATG4D-205ENST00000586477 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
ATG4D-205ENST00000586477 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-205ENST00000586477 ACEP12821 1306 aa22.7■■□□□ 1.22
ATG4D-205ENST00000586477 CABP2Q9NPB3 220 aa22.69■■□□□ 1.22
ATG4D-205ENST00000586477 NWD2Q9ULI1 1742 aa22.68■■□□□ 1.22
ATG4D-205ENST00000586477 GLI3P10071 1580 aa22.67■■□□□ 1.22
ATG4D-205ENST00000586477 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
ATG4D-205ENST00000586477 SRPK2P78362 688 aaKnown RBP22.66■■□□□ 1.22
ATG4D-205ENST00000586477 PHRF1Q9P1Y6 1649 aaKnown RBP22.65■■□□□ 1.22
ATG4D-205ENST00000586477 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
ATG4D-205ENST00000586477 FAM83GA6ND36 823 aa22.64■■□□□ 1.21
ATG4D-205ENST00000586477 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.21
ATG4D-205ENST00000586477 UNC5CLQ8IV45 518 aa22.64■■□□□ 1.21
ATG4D-205ENST00000586477 HAP1P54257 671 aaPredicted RBP22.62■■□□□ 1.21
ATG4D-205ENST00000586477 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
ATG4D-205ENST00000586477 GJD4Q96KN9 370 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-205ENST00000586477 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
ATG4D-205ENST00000586477 EP400Q96L91 3159 aa22.6■■□□□ 1.21
ATG4D-205ENST00000586477 SLC24A1O60721 1099 aa22.6■■□□□ 1.21
ATG4D-205ENST00000586477 CABP1Q9NZU7 370 aa22.6■■□□□ 1.21
ATG4D-205ENST00000586477 EIF4G2P78344 907 aaKnown RBP eCLIP22.59■■□□□ 1.21
ATG4D-205ENST00000586477 USP47Q96K76 1375 aa22.59■■□□□ 1.21
ATG4D-205ENST00000586477 SBNO2Q9Y2G9 1366 aa22.59■■□□□ 1.21
ATG4D-205ENST00000586477 NUTM2GQ5VZR2 741 aa22.58■■□□□ 1.21
ATG4D-205ENST00000586477 AKAP12Q02952 1782 aa22.58■■□□□ 1.2
ATG4D-205ENST00000586477 NRKQ7Z2Y5 1582 aa22.57■■□□□ 1.2
ATG4D-205ENST00000586477 USP6P35125 1406 aa22.57■■□□□ 1.2
ATG4D-205ENST00000586477 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
ATG4D-205ENST00000586477 VPS72Q15906 364 aa22.56■■□□□ 1.2
ATG4D-205ENST00000586477 BRWD3Q6RI45 1802 aa22.56■■□□□ 1.2
ATG4D-205ENST00000586477 USP19O94966 1318 aa22.55■■□□□ 1.2
ATG4D-205ENST00000586477 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
ATG4D-205ENST00000586477 KIAA0232Q92628 1395 aa22.53■■□□□ 1.2
ATG4D-205ENST00000586477 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
ATG4D-205ENST00000586477 BTG4Q9NY30 223 aa22.53■■□□□ 1.2
ATG4D-205ENST00000586477 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
ATG4D-205ENST00000586477 BRD4O60885 1362 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-205ENST00000586477 CPSF1Q10570 1443 aaKnown RBP22.5■■□□□ 1.19
ATG4D-205ENST00000586477 PRDM11Q9NQV5 511 aa22.5■■□□□ 1.19
ATG4D-205ENST00000586477 LMO7Q8WWI1 1683 aa22.49■■□□□ 1.19
ATG4D-205ENST00000586477 MON2Q7Z3U7 1717 aa22.49■■□□□ 1.19
ATG4D-205ENST00000586477 CHRNA2Q15822 529 aa22.49■■□□□ 1.19
ATG4D-205ENST00000586477 CD163L1Q9NR16 1453 aa22.48■■□□□ 1.19
ATG4D-205ENST00000586477 ONECUT3O60422 494 aaPredicted RBP22.48■■□□□ 1.19
ATG4D-205ENST00000586477 ZC3H6P61129 1189 aaKnown RBP22.48■■□□□ 1.19
ATG4D-205ENST00000586477 TESK2Q96S53 571 aa22.48■■□□□ 1.19
ATG4D-205ENST00000586477 SLIT3O75094 1523 aa22.47■■□□□ 1.19
ATG4D-205ENST00000586477 ST20-MTHFSA0A0A6YYL1 179 aa22.46■■□□□ 1.19
ATG4D-205ENST00000586477 CPDO75976 1380 aa22.46■■□□□ 1.19
ATG4D-205ENST00000586477 CAMTA1Q9Y6Y1 1673 aa22.46■■□□□ 1.19
ATG4D-205ENST00000586477 HSPA5P11021 654 aaKnown RBP22.45■■□□□ 1.18
ATG4D-205ENST00000586477 NLRP13Q86W25 1043 aa22.45■■□□□ 1.18
ATG4D-205ENST00000586477 SEPT12Q8IYM1 358 aa22.45■■□□□ 1.18
ATG4D-205ENST00000586477 SPATA31A5Q5VU36 1347 aa22.44■■□□□ 1.18
ATG4D-205ENST00000586477 TTC21BQ7Z4L5 1316 aa22.44■■□□□ 1.18
ATG4D-205ENST00000586477 SPATA31A7Q8IWB4 1347 aa22.44■■□□□ 1.18
ATG4D-205ENST00000586477 CCDC9Q9Y3X0 531 aaKnown RBP22.44■■□□□ 1.18
ATG4D-205ENST00000586477 GCP02774 474 aa22.43■■□□□ 1.18
ATG4D-205ENST00000586477 CDCA8Q53HL2 280 aa22.43■■□□□ 1.18
ATG4D-205ENST00000586477 THSD7AQ9UPZ6 1657 aa22.42■■□□□ 1.18
ATG4D-205ENST00000586477 NLRP6P59044 892 aa22.42■■□□□ 1.18
ATG4D-205ENST00000586477 ZNF692Q9BU19 519 aaPredicted RBP22.42■■□□□ 1.18
ATG4D-205ENST00000586477 COL18A1P39060 1754 aa22.42■■□□□ 1.18
ATG4D-205ENST00000586477 TMF1P82094 1093 aa22.41■■□□□ 1.18
ATG4D-205ENST00000586477 KTN1Q86UP2 1357 aaKnown RBP22.4■■□□□ 1.18
ATG4D-205ENST00000586477 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
ATG4D-205ENST00000586477 SLC12A5Q9H2X9 1139 aa22.4■■□□□ 1.18
ATG4D-205ENST00000586477 USP54Q70EL1 1684 aa22.39■■□□□ 1.17
ATG4D-205ENST00000586477 SPATA31A1Q5TZJ5 1347 aa22.38■■□□□ 1.17
ATG4D-205ENST00000586477 CCDC125Q86Z20 511 aa22.38■■□□□ 1.17
ATG4D-205ENST00000586477 PUS7Q96PZ0 661 aaKnown RBP22.38■■□□□ 1.17
ATG4D-205ENST00000586477 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
ATG4D-205ENST00000586477 STRN4Q9NRL3 753 aa22.37■■□□□ 1.17
ATG4D-205ENST00000586477 ZRANB1Q9UGI0 708 aa22.37■■□□□ 1.17
ATG4D-205ENST00000586477 NFAT5O94916 1531 aa22.36■■□□□ 1.17
ATG4D-205ENST00000586477 COL5A2P05997 1499 aaPredicted RBP22.35■■□□□ 1.17
ATG4D-205ENST00000586477 A0A1W2PP64 1363 aa22.35■■□□□ 1.17
ATG4D-205ENST00000586477 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
ATG4D-205ENST00000586477 LARP1Q6PKG0 1096 aaKnown RBP22.34■■□□□ 1.17
ATG4D-205ENST00000586477 KRT27Q7Z3Y8 459 aa22.34■■□□□ 1.17
ATG4D-205ENST00000586477 TMC1Q8TDI8 760 aa22.34■■□□□ 1.17
ATG4D-205ENST00000586477 AATKQ6ZMQ8 1374 aa22.34■■□□□ 1.17
ATG4D-205ENST00000586477 USP31Q70CQ4 1352 aa22.33■■□□□ 1.17
ATG4D-205ENST00000586477 NME9Q86XW9 330 aa22.32■■□□□ 1.16
ATG4D-205ENST00000586477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.32■■□□□ 1.16
ATG4D-205ENST00000586477 A0A0G2JS52 829 aa22.31■■□□□ 1.16
ATG4D-205ENST00000586477 MYT1Q01538 1121 aa22.31■■□□□ 1.16
ATG4D-205ENST00000586477 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
ATG4D-205ENST00000586477 AXIN2Q9Y2T1 843 aa22.31■■□□□ 1.16
ATG4D-205ENST00000586477 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
ATG4D-205ENST00000586477 ZBTB7CA1YPR0 619 aa22.29■■□□□ 1.16
ATG4D-205ENST00000586477 EVA1CP58658 441 aa22.29■■□□□ 1.16
ATG4D-205ENST00000586477 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-205ENST00000586477 FAM182BQ5T319 152 aa22.28■■□□□ 1.16
ATG4D-205ENST00000586477 HDGFL2Q7Z4V5 671 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms