RNA–Protein interactions for RNA: ENST00000586368.1

PALM3-202, Transcript of paralemmin 3, humanhuman

TSL 3

Gene PALM3, Length 469 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-202ENST00000586368 ATP7BP35670 1465 aa14.52□□□□□ -0.08
PALM3-202ENST00000586368 NUTM2GQ5VZR2 741 aa14.52□□□□□ -0.09
PALM3-202ENST00000586368 BRWD3Q6RI45 1802 aa14.52□□□□□ -0.09
PALM3-202ENST00000586368 ITSN1Q15811 1721 aa14.52□□□□□ -0.09
PALM3-202ENST00000586368 FAM98CQ17RN3 349 aaKnown RBP14.51□□□□□ -0.09
PALM3-202ENST00000586368 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
PALM3-202ENST00000586368 KIAA1210Q9ULL0 1709 aa14.51□□□□□ -0.09
PALM3-202ENST00000586368 ACEP12821 1306 aa14.5□□□□□ -0.09
PALM3-202ENST00000586368 KRT27Q7Z3Y8 459 aa14.5□□□□□ -0.09
PALM3-202ENST00000586368 PRDM11Q9NQV5 511 aa14.5□□□□□ -0.09
PALM3-202ENST00000586368 CCDC61Q9Y6R9 512 aa14.5□□□□□ -0.09
PALM3-202ENST00000586368 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
PALM3-202ENST00000586368 SRPK2P78362 688 aaKnown RBP14.49□□□□□ -0.09
PALM3-202ENST00000586368 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
PALM3-202ENST00000586368 NBPF8Q3BBV2 869 aa14.49□□□□□ -0.09
PALM3-202ENST00000586368 COL14A1Q05707 1796 aaKnown RBP14.49□□□□□ -0.09
PALM3-202ENST00000586368 CENPJQ9HC77 1338 aaPredicted RBP14.48□□□□□ -0.09
PALM3-202ENST00000586368 NEUROD1Q13562 356 aa14.48□□□□□ -0.09
PALM3-202ENST00000586368 L3MBTL2Q969R5 705 aa14.48□□□□□ -0.09
PALM3-202ENST00000586368 SIN3AQ96ST3 1273 aa14.48□□□□□ -0.09
PALM3-202ENST00000586368 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
PALM3-202ENST00000586368 NRAPQ86VF7 1730 aa14.47□□□□□ -0.09
PALM3-202ENST00000586368 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
PALM3-202ENST00000586368 CHRNA2Q15822 529 aa14.47□□□□□ -0.09
PALM3-202ENST00000586368 DEFB132Q7Z7B7 95 aa14.47□□□□□ -0.09
PALM3-202ENST00000586368 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
PALM3-202ENST00000586368 KIAA0232Q92628 1395 aa14.47□□□□□ -0.09
PALM3-202ENST00000586368 PLEKHG3A1L390 1219 aa14.46□□□□□ -0.09
PALM3-202ENST00000586368 ABTB2Q8N961 1025 aa14.46□□□□□ -0.09
PALM3-202ENST00000586368 STRN4Q9NRL3 753 aa14.46□□□□□ -0.09
PALM3-202ENST00000586368 POLR3AO14802 1390 aaPredicted RBP14.46□□□□□ -0.1
PALM3-202ENST00000586368 SPATA31A5Q5VU36 1347 aa14.45□□□□□ -0.1
PALM3-202ENST00000586368 SPATA31A7Q8IWB4 1347 aa14.45□□□□□ -0.1
PALM3-202ENST00000586368 CRYBG1Q9Y4K1 1723 aa14.45□□□□□ -0.1
PALM3-202ENST00000586368 TOPAZ1Q8N9V7 1692 aa14.45□□□□□ -0.1
PALM3-202ENST00000586368 PPIP5K1Q6PFW1 1433 aa14.44□□□□□ -0.1
PALM3-202ENST00000586368 EVA1CP58658 441 aa14.43□□□□□ -0.1
PALM3-202ENST00000586368 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
PALM3-202ENST00000586368 PHRF1Q9P1Y6 1649 aaKnown RBP14.42□□□□□ -0.1
PALM3-202ENST00000586368 USP35Q9P2H5 1018 aa14.42□□□□□ -0.1
PALM3-202ENST00000586368 QRICH2Q9H0J4 1663 aa14.42□□□□□ -0.1
PALM3-202ENST00000586368 CABP1Q9NZU7 370 aa14.41□□□□□ -0.1
PALM3-202ENST00000586368 SPATA31A1Q5TZJ5 1347 aa14.41□□□□□ -0.1
PALM3-202ENST00000586368 ROCK2O75116 1388 aaKnown RBP14.4□□□□□ -0.1
PALM3-202ENST00000586368 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
PALM3-202ENST00000586368 NLRP13Q86W25 1043 aa14.4□□□□□ -0.1
PALM3-202ENST00000586368 BAG6P46379 1132 aa14.39□□□□□ -0.11
PALM3-202ENST00000586368 EVC2Q86UK5 1308 aa14.39□□□□□ -0.11
PALM3-202ENST00000586368 GCP02774 474 aa14.37□□□□□ -0.11
PALM3-202ENST00000586368 NLRP6P59044 892 aa14.37□□□□□ -0.11
PALM3-202ENST00000586368 LARP1Q6PKG0 1096 aaKnown RBP14.37□□□□□ -0.11
PALM3-202ENST00000586368 NRKQ7Z2Y5 1582 aa14.37□□□□□ -0.11
PALM3-202ENST00000586368 USP19O94966 1318 aa14.37□□□□□ -0.11
PALM3-202ENST00000586368 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
PALM3-202ENST00000586368 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
PALM3-202ENST00000586368 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
PALM3-202ENST00000586368 THSD7AQ9UPZ6 1657 aa14.36□□□□□ -0.11
PALM3-202ENST00000586368 USP6P35125 1406 aa14.35□□□□□ -0.11
PALM3-202ENST00000586368 CAMTA1Q9Y6Y1 1673 aa14.35□□□□□ -0.11
PALM3-202ENST00000586368 CPDO75976 1380 aa14.34□□□□□ -0.11
PALM3-202ENST00000586368 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
PALM3-202ENST00000586368 PDE3BQ13370 1112 aa14.34□□□□□ -0.11
PALM3-202ENST00000586368 BRD4O60885 1362 aaPredicted RBP14.34□□□□□ -0.11
PALM3-202ENST00000586368 TRIM37O94972 964 aa14.33□□□□□ -0.12
PALM3-202ENST00000586368 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
PALM3-202ENST00000586368 BARGINQ6ZT62 677 aa14.33□□□□□ -0.12
PALM3-202ENST00000586368 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.12
PALM3-202ENST00000586368 RGPD1P0DJD0 1748 aa14.32□□□□□ -0.12
PALM3-202ENST00000586368 SOX12O15370 315 aa14.32□□□□□ -0.12
PALM3-202ENST00000586368 LMO7Q8WWI1 1683 aa14.31□□□□□ -0.12
PALM3-202ENST00000586368 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
PALM3-202ENST00000586368 EZH2Q15910 746 aaKnown RBP14.3□□□□□ -0.12
PALM3-202ENST00000586368 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
PALM3-202ENST00000586368 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
PALM3-202ENST00000586368 COL5A2P05997 1499 aaPredicted RBP14.3□□□□□ -0.12
PALM3-202ENST00000586368 APBA3O96018 575 aa14.29□□□□□ -0.12
PALM3-202ENST00000586368 THRAP3Q9Y2W1 955 aaKnown RBP14.29□□□□□ -0.12
PALM3-202ENST00000586368 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
PALM3-202ENST00000586368 R3HDM1Q15032 1099 aaKnown RBP14.28□□□□□ -0.12
PALM3-202ENST00000586368 AATKQ6ZMQ8 1374 aa14.28□□□□□ -0.12
PALM3-202ENST00000586368 TOM1L2Q6ZVM7 507 aa14.28□□□□□ -0.12
PALM3-202ENST00000586368 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
PALM3-202ENST00000586368 TNS1Q9HBL0 1735 aaKnown RBP14.28□□□□□ -0.12
PALM3-202ENST00000586368 SLIT3O75094 1523 aa14.27□□□□□ -0.12
PALM3-202ENST00000586368 CRB1P82279 1406 aa14.27□□□□□ -0.12
PALM3-202ENST00000586368 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.12
PALM3-202ENST00000586368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.27□□□□□ -0.13
PALM3-202ENST00000586368 TMC1Q8TDI8 760 aa14.27□□□□□ -0.13
PALM3-202ENST00000586368 AXIN2Q9Y2T1 843 aa14.27□□□□□ -0.13
PALM3-202ENST00000586368 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
PALM3-202ENST00000586368 KCNH5Q8NCM2 988 aa14.26□□□□□ -0.13
PALM3-202ENST00000586368 CAMKK2Q96RR4 588 aa14.26□□□□□ -0.13
PALM3-202ENST00000586368 AKAP12Q02952 1782 aa14.26□□□□□ -0.13
PALM3-202ENST00000586368 DISP2A7MBM2 1401 aa14.25□□□□□ -0.13
PALM3-202ENST00000586368 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
PALM3-202ENST00000586368 ARHGEF25Q86VW2 580 aa14.25□□□□□ -0.13
PALM3-202ENST00000586368 DDB1Q16531 1140 aa14.24□□□□□ -0.13
PALM3-202ENST00000586368 CPSF1Q10570 1443 aaKnown RBP14.24□□□□□ -0.13
PALM3-202ENST00000586368 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
PALM3-202ENST00000586368 COL18A1P39060 1754 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms