RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 BRWD3Q6RI45 1802 aa29.29■■■□□ 2.28
CLPTM1-204ENST00000585961 CHRNA2Q15822 529 aa29.27■■■□□ 2.28
CLPTM1-204ENST00000585961 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
CLPTM1-204ENST00000585961 ZC3H6P61129 1189 aaKnown RBP29.26■■■□□ 2.27
CLPTM1-204ENST00000585961 NBPF1Q3BBV0 1214 aa29.26■■■□□ 2.27
CLPTM1-204ENST00000585961 ADGRB2O60241 1585 aa29.26■■■□□ 2.27
CLPTM1-204ENST00000585961 TULP4Q9NRJ4 1543 aa29.25■■■□□ 2.27
CLPTM1-204ENST00000585961 PLCH1Q4KWH8 1693 aa29.25■■■□□ 2.27
CLPTM1-204ENST00000585961 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
CLPTM1-204ENST00000585961 STRN4Q9NRL3 753 aa29.23■■■□□ 2.27
CLPTM1-204ENST00000585961 SPATA31A5Q5VU36 1347 aa29.22■■■□□ 2.27
CLPTM1-204ENST00000585961 SPATA31A7Q8IWB4 1347 aa29.22■■■□□ 2.27
CLPTM1-204ENST00000585961 TRPM3Q9HCF6 1732 aaPredicted RBP29.21■■■□□ 2.27
CLPTM1-204ENST00000585961 NWD2Q9ULI1 1742 aa29.21■■■□□ 2.27
CLPTM1-204ENST00000585961 ACEP12821 1306 aa29.2■■■□□ 2.27
CLPTM1-204ENST00000585961 ABCA3Q99758 1704 aa29.2■■■□□ 2.27
CLPTM1-204ENST00000585961 CCDC61Q9Y6R9 512 aa29.19■■■□□ 2.26
CLPTM1-204ENST00000585961 KIAA0232Q92628 1395 aa29.18■■■□□ 2.26
CLPTM1-204ENST00000585961 PSDA5PKW4 1024 aaPredicted RBP29.18■■■□□ 2.26
CLPTM1-204ENST00000585961 BAG6P46379 1132 aa29.18■■■□□ 2.26
CLPTM1-204ENST00000585961 EVA1CP58658 441 aa29.17■■■□□ 2.26
CLPTM1-204ENST00000585961 EN1Q05925 392 aaPredicted RBP29.17■■■□□ 2.26
CLPTM1-204ENST00000585961 USP35Q9P2H5 1018 aa29.17■■■□□ 2.26
CLPTM1-204ENST00000585961 ALS2Q96Q42 1657 aa29.16■■■□□ 2.26
CLPTM1-204ENST00000585961 ABTB2Q8N961 1025 aa29.15■■■□□ 2.26
CLPTM1-204ENST00000585961 ATP7BP35670 1465 aa29.13■■■□□ 2.25
CLPTM1-204ENST00000585961 PLEKHG3A1L390 1219 aa29.13■■■□□ 2.25
CLPTM1-204ENST00000585961 SRPK2P78362 688 aaKnown RBP29.13■■■□□ 2.25
CLPTM1-204ENST00000585961 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
CLPTM1-204ENST00000585961 CABP2Q9NPB3 220 aa29.12■■■□□ 2.25
CLPTM1-204ENST00000585961 SPATA31A1Q5TZJ5 1347 aa29.12■■■□□ 2.25
CLPTM1-204ENST00000585961 NRAPQ86VF7 1730 aa29.1■■■□□ 2.25
CLPTM1-204ENST00000585961 ARHGEF28Q8N1W1 1705 aaKnown RBP29.08■■■□□ 2.25
CLPTM1-204ENST00000585961 POLR3AO14802 1390 aaPredicted RBP29.07■■■□□ 2.24
CLPTM1-204ENST00000585961 TRIM37O94972 964 aa29.07■■■□□ 2.24
CLPTM1-204ENST00000585961 LARP1Q6PKG0 1096 aaKnown RBP29.06■■■□□ 2.24
CLPTM1-204ENST00000585961 ZBTB7CA1YPR0 619 aa29.05■■■□□ 2.24
CLPTM1-204ENST00000585961 EZH2Q15910 746 aaKnown RBP29.05■■■□□ 2.24
CLPTM1-204ENST00000585961 CENPJQ9HC77 1338 aaPredicted RBP29.04■■■□□ 2.24
CLPTM1-204ENST00000585961 CABP1Q9NZU7 370 aa29.03■■■□□ 2.24
CLPTM1-204ENST00000585961 GCP02774 474 aa29.02■■■□□ 2.24
CLPTM1-204ENST00000585961 R3HDM1Q15032 1099 aaKnown RBP29.02■■■□□ 2.24
CLPTM1-204ENST00000585961 FAM196AQ6ZSG2 479 aa29.02■■■□□ 2.24
CLPTM1-204ENST00000585961 NLRP13Q86W25 1043 aa29.02■■■□□ 2.24
CLPTM1-204ENST00000585961 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
CLPTM1-204ENST00000585961 PDE3BQ13370 1112 aa29.01■■■□□ 2.23
CLPTM1-204ENST00000585961 SIN3AQ96ST3 1273 aa29.01■■■□□ 2.23
CLPTM1-204ENST00000585961 APBA3O96018 575 aa29■■■□□ 2.23
CLPTM1-204ENST00000585961 NEUROD1Q13562 356 aa28.99■■■□□ 2.23
CLPTM1-204ENST00000585961 PPIP5K1Q6PFW1 1433 aa28.99■■■□□ 2.23
CLPTM1-204ENST00000585961 CRYBG1Q9Y4K1 1723 aa28.98■■■□□ 2.23
CLPTM1-204ENST00000585961 ITSN1Q15811 1721 aa28.97■■■□□ 2.23
CLPTM1-204ENST00000585961 TCP11L2Q8N4U5 519 aa28.97■■■□□ 2.23
CLPTM1-204ENST00000585961 NLRP6P59044 892 aa28.96■■■□□ 2.23
CLPTM1-204ENST00000585961 BARGINQ6ZT62 677 aa28.96■■■□□ 2.23
CLPTM1-204ENST00000585961 CAMKK2Q96RR4 588 aa28.96■■■□□ 2.23
CLPTM1-204ENST00000585961 SSH2Q76I76 1423 aa28.94■■■□□ 2.22
CLPTM1-204ENST00000585961 CAMTA1Q9Y6Y1 1673 aa28.94■■■□□ 2.22
CLPTM1-204ENST00000585961 USP19O94966 1318 aa28.94■■■□□ 2.22
CLPTM1-204ENST00000585961 THSD7AQ9UPZ6 1657 aa28.92■■■□□ 2.22
CLPTM1-204ENST00000585961 PHRF1Q9P1Y6 1649 aaKnown RBP28.91■■■□□ 2.22
CLPTM1-204ENST00000585961 CPDO75976 1380 aa28.9■■■□□ 2.22
CLPTM1-204ENST00000585961 KIAA1210Q9ULL0 1709 aa28.9■■■□□ 2.22
CLPTM1-204ENST00000585961 TOPAZ1Q8N9V7 1692 aa28.87■■■□□ 2.21
CLPTM1-204ENST00000585961 SOX12O15370 315 aa28.86■■■□□ 2.21
CLPTM1-204ENST00000585961 THRAP3Q9Y2W1 955 aaKnown RBP28.86■■■□□ 2.21
CLPTM1-204ENST00000585961 EVC2Q86UK5 1308 aa28.86■■■□□ 2.21
CLPTM1-204ENST00000585961 RGPD1P0DJD0 1748 aa28.84■■■□□ 2.21
CLPTM1-204ENST00000585961 AXIN2Q9Y2T1 843 aa28.83■■■□□ 2.21
CLPTM1-204ENST00000585961 DISP2A7MBM2 1401 aa28.83■■■□□ 2.21
CLPTM1-204ENST00000585961 NRKQ7Z2Y5 1582 aa28.83■■■□□ 2.21
CLPTM1-204ENST00000585961 TOM1L2Q6ZVM7 507 aa28.82■■■□□ 2.2
CLPTM1-204ENST00000585961 USP6P35125 1406 aa28.82■■■□□ 2.2
CLPTM1-204ENST00000585961 BRD4O60885 1362 aaPredicted RBP28.79■■■□□ 2.2
CLPTM1-204ENST00000585961 ROCK2O75116 1388 aaKnown RBP28.78■■■□□ 2.2
CLPTM1-204ENST00000585961 ZNF692Q9BU19 519 aaPredicted RBP28.78■■■□□ 2.2
CLPTM1-204ENST00000585961 COL5A2P05997 1499 aaPredicted RBP28.78■■■□□ 2.2
CLPTM1-204ENST00000585961 TTC21BQ7Z4L5 1316 aa28.77■■■□□ 2.2
CLPTM1-204ENST00000585961 NBPF14Q5TI25 921 aa28.77■■■□□ 2.2
CLPTM1-204ENST00000585961 TNS1Q9HBL0 1735 aaKnown RBP28.77■■■□□ 2.2
CLPTM1-204ENST00000585961 AATKQ6ZMQ8 1374 aa28.76■■■□□ 2.2
CLPTM1-204ENST00000585961 QRICH2Q9H0J4 1663 aa28.76■■■□□ 2.19
CLPTM1-204ENST00000585961 CRB1P82279 1406 aa28.76■■■□□ 2.19
CLPTM1-204ENST00000585961 LMO7Q8WWI1 1683 aa28.75■■■□□ 2.19
CLPTM1-204ENST00000585961 DDB1Q16531 1140 aa28.75■■■□□ 2.19
CLPTM1-204ENST00000585961 LRP5O75197 1615 aa28.74■■■□□ 2.19
CLPTM1-204ENST00000585961 PTF1AQ7RTS3 328 aa28.74■■■□□ 2.19
CLPTM1-204ENST00000585961 CSB-PGBD3P0DP91 1061 aa28.73■■■□□ 2.19
CLPTM1-204ENST00000585961 ARHGEF25Q86VW2 580 aa28.73■■■□□ 2.19
CLPTM1-204ENST00000585961 PARD3Q8TEW0 1356 aa28.71■■■□□ 2.19
CLPTM1-204ENST00000585961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.7■■■□□ 2.18
CLPTM1-204ENST00000585961 KCNH5Q8NCM2 988 aa28.7■■■□□ 2.18
CLPTM1-204ENST00000585961 WDR17Q8IZU2 1322 aa28.69■■■□□ 2.18
CLPTM1-204ENST00000585961 MARCH10Q8NA82 808 aaPredicted RBP28.68■■■□□ 2.18
CLPTM1-204ENST00000585961 KTN1Q86UP2 1357 aaKnown RBP28.66■■■□□ 2.18
CLPTM1-204ENST00000585961 SLIT3O75094 1523 aa28.66■■■□□ 2.18
CLPTM1-204ENST00000585961 C11orf95C9JLR9 678 aaPredicted RBP28.66■■■□□ 2.18
CLPTM1-204ENST00000585961 TMC1Q8TDI8 760 aa28.66■■■□□ 2.18
CLPTM1-204ENST00000585961 CARD10Q9BWT7 1032 aa28.64■■■□□ 2.18
CLPTM1-204ENST00000585961 CARD11Q9BXL7 1154 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms