RNA–Protein interactions for RNA: ENST00000585951.1

CTDP1-203, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 3

Gene CTDP1, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-203ENST00000585951 USP21Q9UK80 565 aa27.89■■■□□ 2.06
CTDP1-203ENST00000585951 CRYBG1Q9Y4K1 1723 aa27.89■■■□□ 2.05
CTDP1-203ENST00000585951 ATAD2Q6PL18 1390 aa27.87■■■□□ 2.05
CTDP1-203ENST00000585951 PLEKHG5O94827 1062 aa27.86■■■□□ 2.05
CTDP1-203ENST00000585951 RXRBP28702 533 aa27.86■■■□□ 2.05
CTDP1-203ENST00000585951 QTRT2Q9H974 415 aaKnown RBP27.86■■■□□ 2.05
CTDP1-203ENST00000585951 BCL9LQ86UU0 1499 aa27.85■■■□□ 2.05
CTDP1-203ENST00000585951 BRD4O60885 1362 aaPredicted RBP27.85■■■□□ 2.05
CTDP1-203ENST00000585951 SLIT2O94813 1529 aa27.84■■■□□ 2.05
CTDP1-203ENST00000585951 ST20-MTHFSA0A0A6YYL1 179 aa27.84■■■□□ 2.05
CTDP1-203ENST00000585951 TESK2Q96S53 571 aa27.84■■■□□ 2.05
CTDP1-203ENST00000585951 USP6P35125 1406 aa27.84■■■□□ 2.05
CTDP1-203ENST00000585951 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.83■■■□□ 2.05
CTDP1-203ENST00000585951 AKAP12Q02952 1782 aa27.82■■■□□ 2.04
CTDP1-203ENST00000585951 TRPC5Q9UL62 973 aaPredicted RBP27.82■■■□□ 2.04
CTDP1-203ENST00000585951 USP47Q96K76 1375 aa27.82■■■□□ 2.04
CTDP1-203ENST00000585951 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
CTDP1-203ENST00000585951 ATRNO75882 1429 aa27.81■■■□□ 2.04
CTDP1-203ENST00000585951 CDK12Q9NYV4 1490 aaPredicted RBP27.81■■■□□ 2.04
CTDP1-203ENST00000585951 PLCH1Q4KWH8 1693 aa27.8■■■□□ 2.04
CTDP1-203ENST00000585951 NWD2Q9ULI1 1742 aa27.79■■■□□ 2.04
CTDP1-203ENST00000585951 PHRF1Q9P1Y6 1649 aaKnown RBP27.79■■■□□ 2.04
CTDP1-203ENST00000585951 SSH2Q76I76 1423 aa27.79■■■□□ 2.04
CTDP1-203ENST00000585951 SLC24A1O60721 1099 aa27.79■■■□□ 2.04
CTDP1-203ENST00000585951 ABTB2Q8N961 1025 aa27.79■■■□□ 2.04
CTDP1-203ENST00000585951 PUS7Q96PZ0 661 aaKnown RBP27.79■■■□□ 2.04
CTDP1-203ENST00000585951 ZNF692Q9BU19 519 aaPredicted RBP27.78■■■□□ 2.04
CTDP1-203ENST00000585951 CPSF1Q10570 1443 aaKnown RBP27.77■■■□□ 2.04
CTDP1-203ENST00000585951 NUTM2GQ5VZR2 741 aa27.77■■■□□ 2.04
CTDP1-203ENST00000585951 UNC5CLQ8IV45 518 aa27.77■■■□□ 2.04
CTDP1-203ENST00000585951 FAM83GA6ND36 823 aa27.76■■■□□ 2.03
CTDP1-203ENST00000585951 COL14A1Q05707 1796 aaKnown RBP27.75■■■□□ 2.03
CTDP1-203ENST00000585951 MON2Q7Z3U7 1717 aa27.74■■■□□ 2.03
CTDP1-203ENST00000585951 USP19O94966 1318 aa27.73■■■□□ 2.03
CTDP1-203ENST00000585951 NRKQ7Z2Y5 1582 aa27.73■■■□□ 2.03
CTDP1-203ENST00000585951 NLRP13Q86W25 1043 aa27.72■■■□□ 2.03
CTDP1-203ENST00000585951 RGS12O14924 1447 aa27.72■■■□□ 2.03
CTDP1-203ENST00000585951 PIK3C2AO00443 1686 aa27.72■■■□□ 2.03
CTDP1-203ENST00000585951 CD163L1Q9NR16 1453 aa27.71■■■□□ 2.03
CTDP1-203ENST00000585951 NRAPQ86VF7 1730 aa27.7■■■□□ 2.03
CTDP1-203ENST00000585951 GJD4Q96KN9 370 aaPredicted RBP27.7■■■□□ 2.02
CTDP1-203ENST00000585951 KTN1Q86UP2 1357 aaKnown RBP27.7■■■□□ 2.02
CTDP1-203ENST00000585951 TTC21BQ7Z4L5 1316 aa27.69■■■□□ 2.02
CTDP1-203ENST00000585951 TMC1Q8TDI8 760 aa27.69■■■□□ 2.02
CTDP1-203ENST00000585951 SLC12A5Q9H2X9 1139 aa27.69■■■□□ 2.02
CTDP1-203ENST00000585951 KIAA0232Q92628 1395 aa27.69■■■□□ 2.02
CTDP1-203ENST00000585951 PRDM11Q9NQV5 511 aa27.68■■■□□ 2.02
CTDP1-203ENST00000585951 TMF1P82094 1093 aa27.67■■■□□ 2.02
CTDP1-203ENST00000585951 TTC21AQ8NDW8 1320 aa27.67■■■□□ 2.02
CTDP1-203ENST00000585951 GLI3P10071 1580 aa27.66■■■□□ 2.02
CTDP1-203ENST00000585951 NINLQ9Y2I6 1382 aa27.66■■■□□ 2.02
CTDP1-203ENST00000585951 NLRP6P59044 892 aa27.66■■■□□ 2.02
CTDP1-203ENST00000585951 VPS72Q15906 364 aa27.66■■■□□ 2.02
CTDP1-203ENST00000585951 BTG4Q9NY30 223 aa27.66■■■□□ 2.02
CTDP1-203ENST00000585951 ZC3H6P61129 1189 aaKnown RBP27.65■■■□□ 2.02
CTDP1-203ENST00000585951 SLIT3O75094 1523 aa27.65■■■□□ 2.02
CTDP1-203ENST00000585951 CPDO75976 1380 aa27.64■■■□□ 2.02
CTDP1-203ENST00000585951 GCP02774 474 aa27.64■■■□□ 2.02
CTDP1-203ENST00000585951 HDGFL2Q7Z4V5 671 aaPredicted RBP27.64■■■□□ 2.02
CTDP1-203ENST00000585951 TERF2IPQ9NYB0 399 aa27.63■■■□□ 2.01
CTDP1-203ENST00000585951 A0A1W2PP64 1363 aa27.62■■■□□ 2.01
CTDP1-203ENST00000585951 CHRNA2Q15822 529 aa27.61■■■□□ 2.01
CTDP1-203ENST00000585951 EDC4Q6P2E9 1401 aaKnown RBP27.59■■■□□ 2.01
CTDP1-203ENST00000585951 LMO7Q8WWI1 1683 aa27.59■■■□□ 2.01
CTDP1-203ENST00000585951 CDCA8Q53HL2 280 aa27.58■■■□□ 2.01
CTDP1-203ENST00000585951 USP54Q70EL1 1684 aa27.57■■■□□ 2
CTDP1-203ENST00000585951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.57■■■□□ 2
CTDP1-203ENST00000585951 CCDC9Q9Y3X0 531 aaKnown RBP27.57■■■□□ 2
CTDP1-203ENST00000585951 USP31Q70CQ4 1352 aa27.56■■■□□ 2
CTDP1-203ENST00000585951 CAMTA1Q9Y6Y1 1673 aa27.55■■■□□ 2
CTDP1-203ENST00000585951 EIF4G2P78344 907 aaKnown RBP eCLIP27.54■■■□□ 2
CTDP1-203ENST00000585951 ANKRD36BQ8N2N9 1353 aa27.54■■■□□ 2
CTDP1-203ENST00000585951 KCNH5Q8NCM2 988 aa27.54■■■□□ 2
CTDP1-203ENST00000585951 ONECUT3O60422 494 aaPredicted RBP27.53■■■□□ 2
CTDP1-203ENST00000585951 SPATA31A5Q5VU36 1347 aa27.52■■■□□ 2
CTDP1-203ENST00000585951 SPATA31A7Q8IWB4 1347 aa27.52■■■□□ 2
CTDP1-203ENST00000585951 NME9Q86XW9 330 aa27.52■■■□□ 2
CTDP1-203ENST00000585951 ZRANB1Q9UGI0 708 aa27.51■■□□□ 1.99
CTDP1-203ENST00000585951 NFAT5O94916 1531 aa27.51■■□□□ 1.99
CTDP1-203ENST00000585951 BRWD3Q6RI45 1802 aa27.51■■□□□ 1.99
CTDP1-203ENST00000585951 COL18A1P39060 1754 aa27.5■■□□□ 1.99
CTDP1-203ENST00000585951 AATKQ6ZMQ8 1374 aa27.5■■□□□ 1.99
CTDP1-203ENST00000585951 MYOM1P52179 1685 aa27.5■■□□□ 1.99
CTDP1-203ENST00000585951 HSPA5P11021 654 aaKnown RBP27.5■■□□□ 1.99
CTDP1-203ENST00000585951 UPF1Q92900 1129 aaKnown RBP eCLIP27.5■■□□□ 1.99
CTDP1-203ENST00000585951 STRN4Q9NRL3 753 aa27.5■■□□□ 1.99
CTDP1-203ENST00000585951 ARHGEF25Q86VW2 580 aa27.48■■□□□ 1.99
CTDP1-203ENST00000585951 SEPT12Q8IYM1 358 aa27.48■■□□□ 1.99
CTDP1-203ENST00000585951 COL5A2P05997 1499 aaPredicted RBP27.47■■□□□ 1.99
CTDP1-203ENST00000585951 EVA1CP58658 441 aa27.47■■□□□ 1.99
CTDP1-203ENST00000585951 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
CTDP1-203ENST00000585951 SOX12O15370 315 aa27.46■■□□□ 1.99
CTDP1-203ENST00000585951 OVOS2A0A0J9YW53 1432 aa27.46■■□□□ 1.99
CTDP1-203ENST00000585951 OVOS2Q6IE36 1432 aa27.46■■□□□ 1.99
CTDP1-203ENST00000585951 ZBTB7CA1YPR0 619 aa27.45■■□□□ 1.98
CTDP1-203ENST00000585951 FAM98CQ17RN3 349 aaKnown RBP27.45■■□□□ 1.98
CTDP1-203ENST00000585951 RGPD5Q99666 1765 aa27.43■■□□□ 1.98
CTDP1-203ENST00000585951 LARP1Q6PKG0 1096 aaKnown RBP27.43■■□□□ 1.98
CTDP1-203ENST00000585951 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
CTDP1-203ENST00000585951 EP400Q96L91 3159 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms