RNA–Protein interactions for RNA: ENST00000585934.1

TRAPPC6A-202, Transcript of trafficking protein particle complex 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6A, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-202ENST00000585934 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
TRAPPC6A-202ENST00000585934 NWD2Q9ULI1 1742 aa23.31■■□□□ 1.32
TRAPPC6A-202ENST00000585934 POLR3AO14802 1390 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC6A-202ENST00000585934 SLIT2O94813 1529 aa23.31■■□□□ 1.32
TRAPPC6A-202ENST00000585934 CABP2Q9NPB3 220 aa23.3■■□□□ 1.32
TRAPPC6A-202ENST00000585934 ACEP12821 1306 aa23.29■■□□□ 1.32
TRAPPC6A-202ENST00000585934 EVC2Q86UK5 1308 aa23.29■■□□□ 1.32
TRAPPC6A-202ENST00000585934 PHRF1Q9P1Y6 1649 aaKnown RBP23.28■■□□□ 1.32
TRAPPC6A-202ENST00000585934 PLEKHG3A1L390 1219 aa23.27■■□□□ 1.32
TRAPPC6A-202ENST00000585934 CARD11Q9BXL7 1154 aa23.27■■□□□ 1.32
TRAPPC6A-202ENST00000585934 UNC5CLQ8IV45 518 aa23.26■■□□□ 1.31
TRAPPC6A-202ENST00000585934 COL14A1Q05707 1796 aaKnown RBP23.26■■□□□ 1.31
TRAPPC6A-202ENST00000585934 NRAPQ86VF7 1730 aa23.23■■□□□ 1.31
TRAPPC6A-202ENST00000585934 GLI3P10071 1580 aa23.22■■□□□ 1.31
TRAPPC6A-202ENST00000585934 GJD4Q96KN9 370 aaPredicted RBP23.21■■□□□ 1.31
TRAPPC6A-202ENST00000585934 SBNO2Q9Y2G9 1366 aa23.2■■□□□ 1.3
TRAPPC6A-202ENST00000585934 NUTM2GQ5VZR2 741 aa23.19■■□□□ 1.3
TRAPPC6A-202ENST00000585934 CABP1Q9NZU7 370 aa23.19■■□□□ 1.3
TRAPPC6A-202ENST00000585934 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
TRAPPC6A-202ENST00000585934 NRKQ7Z2Y5 1582 aa23.18■■□□□ 1.3
TRAPPC6A-202ENST00000585934 ATAD2Q6PL18 1390 aa23.18■■□□□ 1.3
TRAPPC6A-202ENST00000585934 FAM83GA6ND36 823 aa23.18■■□□□ 1.3
TRAPPC6A-202ENST00000585934 ABTB2Q8N961 1025 aa23.18■■□□□ 1.3
TRAPPC6A-202ENST00000585934 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
TRAPPC6A-202ENST00000585934 CCDC9Q9Y3X0 531 aaKnown RBP23.18■■□□□ 1.3
TRAPPC6A-202ENST00000585934 USP6P35125 1406 aa23.17■■□□□ 1.3
TRAPPC6A-202ENST00000585934 BRD4O60885 1362 aaPredicted RBP23.17■■□□□ 1.3
TRAPPC6A-202ENST00000585934 UPF1Q92900 1129 aaKnown RBP eCLIP23.17■■□□□ 1.31e-11■■■■■ 27
TRAPPC6A-202ENST00000585934 PRDM11Q9NQV5 511 aa23.17■■□□□ 1.3
TRAPPC6A-202ENST00000585934 VPS72Q15906 364 aa23.16■■□□□ 1.3
TRAPPC6A-202ENST00000585934 BTG4Q9NY30 223 aa23.15■■□□□ 1.3
TRAPPC6A-202ENST00000585934 KIAA0232Q92628 1395 aa23.14■■□□□ 1.3
TRAPPC6A-202ENST00000585934 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
TRAPPC6A-202ENST00000585934 BRWD3Q6RI45 1802 aa23.12■■□□□ 1.29
TRAPPC6A-202ENST00000585934 USP19O94966 1318 aa23.11■■□□□ 1.29
TRAPPC6A-202ENST00000585934 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
TRAPPC6A-202ENST00000585934 NLRP13Q86W25 1043 aa23.11■■□□□ 1.29
TRAPPC6A-202ENST00000585934 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
TRAPPC6A-202ENST00000585934 ZC3H6P61129 1189 aaKnown RBP23.1■■□□□ 1.29
TRAPPC6A-202ENST00000585934 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
TRAPPC6A-202ENST00000585934 A0A0G2JS52 829 aa23.07■■□□□ 1.28
TRAPPC6A-202ENST00000585934 MYT1Q01538 1121 aa23.07■■□□□ 1.28
TRAPPC6A-202ENST00000585934 ZNF692Q9BU19 519 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC6A-202ENST00000585934 SLIT3O75094 1523 aa23.07■■□□□ 1.28
TRAPPC6A-202ENST00000585934 SSH2Q76I76 1423 aa23.07■■□□□ 1.28
TRAPPC6A-202ENST00000585934 KTN1Q86UP2 1357 aaKnown RBP23.06■■□□□ 1.28
TRAPPC6A-202ENST00000585934 NLRP6P59044 892 aa23.06■■□□□ 1.28
TRAPPC6A-202ENST00000585934 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
TRAPPC6A-202ENST00000585934 CPDO75976 1380 aa23.05■■□□□ 1.28
TRAPPC6A-202ENST00000585934 SEPT12Q8IYM1 358 aa23.05■■□□□ 1.28
TRAPPC6A-202ENST00000585934 LMO7Q8WWI1 1683 aa23.05■■□□□ 1.28
TRAPPC6A-202ENST00000585934 TMC1Q8TDI8 760 aa23.04■■□□□ 1.28
TRAPPC6A-202ENST00000585934 STRN4Q9NRL3 753 aa23.04■■□□□ 1.28
TRAPPC6A-202ENST00000585934 USP47Q96K76 1375 aa23.03■■□□□ 1.28
TRAPPC6A-202ENST00000585934 ST20-MTHFSA0A0A6YYL1 179 aa23.03■■□□□ 1.28
TRAPPC6A-202ENST00000585934 GCP02774 474 aa23.03■■□□□ 1.28
TRAPPC6A-202ENST00000585934 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
TRAPPC6A-202ENST00000585934 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
TRAPPC6A-202ENST00000585934 TTC21AQ8NDW8 1320 aa23.03■■□□□ 1.28
TRAPPC6A-202ENST00000585934 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
TRAPPC6A-202ENST00000585934 SPATA31A5Q5VU36 1347 aa23.02■■□□□ 1.28
TRAPPC6A-202ENST00000585934 SPATA31A7Q8IWB4 1347 aa23.02■■□□□ 1.28
TRAPPC6A-202ENST00000585934 EP400Q96L91 3159 aa23.01■■□□□ 1.27
TRAPPC6A-202ENST00000585934 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
TRAPPC6A-202ENST00000585934 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
TRAPPC6A-202ENST00000585934 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
TRAPPC6A-202ENST00000585934 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
TRAPPC6A-202ENST00000585934 CD163L1Q9NR16 1453 aa22.99■■□□□ 1.27
TRAPPC6A-202ENST00000585934 SLC24A1O60721 1099 aa22.99■■□□□ 1.27
TRAPPC6A-202ENST00000585934 EVA1CP58658 441 aa22.99■■□□□ 1.27
TRAPPC6A-202ENST00000585934 HDGFL2Q7Z4V5 671 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC6A-202ENST00000585934 TESK2Q96S53 571 aa22.99■■□□□ 1.27
TRAPPC6A-202ENST00000585934 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC6A-202ENST00000585934 KRT27Q7Z3Y8 459 aa22.97■■□□□ 1.27
TRAPPC6A-202ENST00000585934 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
TRAPPC6A-202ENST00000585934 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
TRAPPC6A-202ENST00000585934 USP54Q70EL1 1684 aa22.97■■□□□ 1.27
TRAPPC6A-202ENST00000585934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.96■■□□□ 1.27
TRAPPC6A-202ENST00000585934 TERF2IPQ9NYB0 399 aa22.96■■□□□ 1.27
TRAPPC6A-202ENST00000585934 SPATA31A1Q5TZJ5 1347 aa22.96■■□□□ 1.27
TRAPPC6A-202ENST00000585934 COL5A2P05997 1499 aaPredicted RBP22.96■■□□□ 1.27
TRAPPC6A-202ENST00000585934 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
TRAPPC6A-202ENST00000585934 SOX12O15370 315 aa22.95■■□□□ 1.26
TRAPPC6A-202ENST00000585934 EDC4Q6P2E9 1401 aaKnown RBP22.95■■□□□ 1.26
TRAPPC6A-202ENST00000585934 SLC12A5Q9H2X9 1139 aa22.95■■□□□ 1.26
TRAPPC6A-202ENST00000585934 KCNH5Q8NCM2 988 aa22.94■■□□□ 1.26
TRAPPC6A-202ENST00000585934 USP35Q9P2H5 1018 aa22.94■■□□□ 1.26
TRAPPC6A-202ENST00000585934 AATKQ6ZMQ8 1374 aa22.93■■□□□ 1.26
TRAPPC6A-202ENST00000585934 TMF1P82094 1093 aa22.93■■□□□ 1.26
TRAPPC6A-202ENST00000585934 CCDC125Q86Z20 511 aa22.93■■□□□ 1.26
TRAPPC6A-202ENST00000585934 COL18A1P39060 1754 aa22.93■■□□□ 1.26
TRAPPC6A-202ENST00000585934 NFAT5O94916 1531 aa22.92■■□□□ 1.26
TRAPPC6A-202ENST00000585934 BLMP54132 1417 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC6A-202ENST00000585934 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
TRAPPC6A-202ENST00000585934 RGPD5Q99666 1765 aa22.91■■□□□ 1.26
TRAPPC6A-202ENST00000585934 NME9Q86XW9 330 aa22.9■■□□□ 1.26
TRAPPC6A-202ENST00000585934 LTN1O94822 1766 aa22.9■■□□□ 1.26
TRAPPC6A-202ENST00000585934 USP31Q70CQ4 1352 aa22.89■■□□□ 1.26
TRAPPC6A-202ENST00000585934 CRB1P82279 1406 aa22.89■■□□□ 1.25
TRAPPC6A-202ENST00000585934 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms