RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 PPIP5K1Q6PFW1 1433 aa29.8■■■□□ 2.36
PTBP1-207ENST00000585932 TRPC5Q9UL62 973 aaPredicted RBP29.79■■■□□ 2.36
PTBP1-207ENST00000585932 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.79■■■□□ 2.36
PTBP1-207ENST00000585932 PAK3O75914 559 aaPredicted RBP29.78■■■□□ 2.36
PTBP1-207ENST00000585932 PLCH1Q4KWH8 1693 aa29.77■■■□□ 2.36
PTBP1-207ENST00000585932 HAP1P54257 671 aaPredicted RBP29.76■■■□□ 2.35
PTBP1-207ENST00000585932 FAM83GA6ND36 823 aa29.75■■■□□ 2.35
PTBP1-207ENST00000585932 CARD11Q9BXL7 1154 aa29.75■■■□□ 2.35
PTBP1-207ENST00000585932 PCGF6Q9BYE7 350 aa29.75■■■□□ 2.35
PTBP1-207ENST00000585932 UNC5CLQ8IV45 518 aa29.74■■■□□ 2.35
PTBP1-207ENST00000585932 CABP1Q9NZU7 370 aa29.73■■■□□ 2.35
PTBP1-207ENST00000585932 EVC2Q86UK5 1308 aa29.72■■■□□ 2.35
PTBP1-207ENST00000585932 NUTM2GQ5VZR2 741 aa29.72■■■□□ 2.35
PTBP1-207ENST00000585932 GLI3P10071 1580 aa29.72■■■□□ 2.35
PTBP1-207ENST00000585932 NWD2Q9ULI1 1742 aa29.7■■■□□ 2.34
PTBP1-207ENST00000585932 PHRF1Q9P1Y6 1649 aaKnown RBP29.7■■■□□ 2.34
PTBP1-207ENST00000585932 GJD4Q96KN9 370 aaPredicted RBP29.69■■■□□ 2.34
PTBP1-207ENST00000585932 NRAPQ86VF7 1730 aa29.68■■■□□ 2.34
PTBP1-207ENST00000585932 SBNO2Q9Y2G9 1366 aa29.68■■■□□ 2.34
PTBP1-207ENST00000585932 UPF1Q92900 1129 aaKnown RBP eCLIP29.67■■■□□ 2.345e-28■■■■■ 62.8
PTBP1-207ENST00000585932 USP6P35125 1406 aa29.66■■■□□ 2.34
PTBP1-207ENST00000585932 COL14A1Q05707 1796 aaKnown RBP29.65■■■□□ 2.34
PTBP1-207ENST00000585932 SSH2Q76I76 1423 aa29.65■■■□□ 2.34
PTBP1-207ENST00000585932 NRKQ7Z2Y5 1582 aa29.62■■■□□ 2.33
PTBP1-207ENST00000585932 VPS72Q15906 364 aa29.62■■■□□ 2.33
PTBP1-207ENST00000585932 ABTB2Q8N961 1025 aa29.62■■■□□ 2.33
PTBP1-207ENST00000585932 USP19O94966 1318 aa29.62■■■□□ 2.33
PTBP1-207ENST00000585932 KIAA0232Q92628 1395 aa29.62■■■□□ 2.33
PTBP1-207ENST00000585932 BTG4Q9NY30 223 aa29.61■■■□□ 2.33
PTBP1-207ENST00000585932 AKAP12Q02952 1782 aa29.6■■■□□ 2.33
PTBP1-207ENST00000585932 PIK3C2AO00443 1686 aa29.58■■■□□ 2.33
PTBP1-207ENST00000585932 CPSF1Q10570 1443 aaKnown RBP29.58■■■□□ 2.33
PTBP1-207ENST00000585932 ATAD2Q6PL18 1390 aa29.58■■■□□ 2.33
PTBP1-207ENST00000585932 TESK2Q96S53 571 aa29.58■■■□□ 2.33
PTBP1-207ENST00000585932 EP400Q96L91 3159 aa29.58■■■□□ 2.33
PTBP1-207ENST00000585932 ZC3H6P61129 1189 aaKnown RBP29.57■■■□□ 2.32
PTBP1-207ENST00000585932 CHRNA2Q15822 529 aa29.57■■■□□ 2.32
PTBP1-207ENST00000585932 BRD4O60885 1362 aaPredicted RBP29.56■■■□□ 2.32
PTBP1-207ENST00000585932 PRDM11Q9NQV5 511 aa29.56■■■□□ 2.32
PTBP1-207ENST00000585932 CD163L1Q9NR16 1453 aa29.55■■■□□ 2.32
PTBP1-207ENST00000585932 CLSPNQ9HAW4 1339 aa29.54■■■□□ 2.32
PTBP1-207ENST00000585932 ST20-MTHFSA0A0A6YYL1 179 aa29.54■■■□□ 2.32
PTBP1-207ENST00000585932 BRWD3Q6RI45 1802 aa29.52■■■□□ 2.32
PTBP1-207ENST00000585932 SLIT3O75094 1523 aa29.51■■■□□ 2.32
PTBP1-207ENST00000585932 TTC21BQ7Z4L5 1316 aa29.51■■■□□ 2.32
PTBP1-207ENST00000585932 CCDC9Q9Y3X0 531 aaKnown RBP29.51■■■□□ 2.31
PTBP1-207ENST00000585932 ONECUT3O60422 494 aaPredicted RBP29.5■■■□□ 2.31
PTBP1-207ENST00000585932 GCP02774 474 aa29.5■■■□□ 2.31
PTBP1-207ENST00000585932 NLRP13Q86W25 1043 aa29.5■■■□□ 2.31
PTBP1-207ENST00000585932 MON2Q7Z3U7 1717 aa29.5■■■□□ 2.31
PTBP1-207ENST00000585932 CPDO75976 1380 aa29.5■■■□□ 2.31
PTBP1-207ENST00000585932 LMO7Q8WWI1 1683 aa29.5■■■□□ 2.31
PTBP1-207ENST00000585932 CAMTA1Q9Y6Y1 1673 aa29.49■■■□□ 2.31
PTBP1-207ENST00000585932 SEPT12Q8IYM1 358 aa29.48■■■□□ 2.31
PTBP1-207ENST00000585932 ZNF692Q9BU19 519 aaPredicted RBP29.48■■■□□ 2.31
PTBP1-207ENST00000585932 NLRP6P59044 892 aa29.47■■■□□ 2.31
PTBP1-207ENST00000585932 SLC12A5Q9H2X9 1139 aa29.47■■■□□ 2.31
PTBP1-207ENST00000585932 KTN1Q86UP2 1357 aaKnown RBP29.47■■■□□ 2.31
PTBP1-207ENST00000585932 USP47Q96K76 1375 aa29.47■■■□□ 2.31
PTBP1-207ENST00000585932 SPATA31A5Q5VU36 1347 aa29.46■■■□□ 2.31
PTBP1-207ENST00000585932 SPATA31A7Q8IWB4 1347 aa29.46■■■□□ 2.31
PTBP1-207ENST00000585932 TIMELESSQ9UNS1 1208 aa29.46■■■□□ 2.31
PTBP1-207ENST00000585932 FAM98CQ17RN3 349 aaKnown RBP29.43■■■□□ 2.3
PTBP1-207ENST00000585932 TMC1Q8TDI8 760 aa29.42■■■□□ 2.3
PTBP1-207ENST00000585932 ZRANB1Q9UGI0 708 aa29.42■■■□□ 2.3
PTBP1-207ENST00000585932 PUS7Q96PZ0 661 aaKnown RBP29.41■■■□□ 2.3
PTBP1-207ENST00000585932 STRN4Q9NRL3 753 aa29.41■■■□□ 2.3
PTBP1-207ENST00000585932 TTC21AQ8NDW8 1320 aa29.41■■■□□ 2.3
PTBP1-207ENST00000585932 THSD7AQ9UPZ6 1657 aa29.4■■■□□ 2.3
PTBP1-207ENST00000585932 SPATA31A1Q5TZJ5 1347 aa29.4■■■□□ 2.3
PTBP1-207ENST00000585932 A0A1W2PP64 1363 aa29.39■■■□□ 2.3
PTBP1-207ENST00000585932 CCER1Q8TC90 406 aaPredicted RBP29.39■■■□□ 2.3
PTBP1-207ENST00000585932 COL18A1P39060 1754 aa29.39■■■□□ 2.29
PTBP1-207ENST00000585932 NFAT5O94916 1531 aa29.37■■■□□ 2.29
PTBP1-207ENST00000585932 LARP1Q6PKG0 1096 aaKnown RBP29.37■■■□□ 2.29
PTBP1-207ENST00000585932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.37■■■□□ 2.29
PTBP1-207ENST00000585932 COL5A2P05997 1499 aaPredicted RBP29.36■■■□□ 2.29
PTBP1-207ENST00000585932 NME9Q86XW9 330 aa29.36■■■□□ 2.29
PTBP1-207ENST00000585932 USP54Q70EL1 1684 aa29.35■■■□□ 2.29
PTBP1-207ENST00000585932 ZBTB7CA1YPR0 619 aa29.34■■■□□ 2.29
PTBP1-207ENST00000585932 AATKQ6ZMQ8 1374 aa29.34■■■□□ 2.29
PTBP1-207ENST00000585932 USP31Q70CQ4 1352 aa29.34■■■□□ 2.29
PTBP1-207ENST00000585932 KRT27Q7Z3Y8 459 aa29.33■■■□□ 2.29
PTBP1-207ENST00000585932 EDC4Q6P2E9 1401 aaKnown RBP29.33■■■□□ 2.29
PTBP1-207ENST00000585932 SOX12O15370 315 aa29.32■■■□□ 2.28
PTBP1-207ENST00000585932 HDGFL2Q7Z4V5 671 aaPredicted RBP29.32■■■□□ 2.28
PTBP1-207ENST00000585932 ARHGEF25Q86VW2 580 aa29.32■■■□□ 2.28
PTBP1-207ENST00000585932 AXIN2Q9Y2T1 843 aa29.32■■■□□ 2.28
PTBP1-207ENST00000585932 A0A0G2JS52 829 aa29.31■■■□□ 2.28
PTBP1-207ENST00000585932 EVA1CP58658 441 aa29.31■■■□□ 2.28
PTBP1-207ENST00000585932 MYT1Q01538 1121 aa29.31■■■□□ 2.28
PTBP1-207ENST00000585932 USP35Q9P2H5 1018 aa29.31■■■□□ 2.28
PTBP1-207ENST00000585932 TERF2IPQ9NYB0 399 aa29.29■■■□□ 2.28
PTBP1-207ENST00000585932 NINLQ9Y2I6 1382 aa29.28■■■□□ 2.28
PTBP1-207ENST00000585932 FAM182BQ5T319 152 aa29.28■■■□□ 2.28
PTBP1-207ENST00000585932 RGPD5Q99666 1765 aa29.27■■■□□ 2.28
PTBP1-207ENST00000585932 TMF1P82094 1093 aa29.27■■■□□ 2.28
PTBP1-207ENST00000585932 KCNH5Q8NCM2 988 aa29.27■■■□□ 2.28
PTBP1-207ENST00000585932 BARGINQ6ZT62 677 aa29.25■■■□□ 2.27
PTBP1-207ENST00000585932 OVOS2A0A0J9YW53 1432 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms