RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 SF3B2Q13435 895 aaKnown RBP29.7■■■□□ 2.35
CHAF1A-203ENST00000585854 BTG4Q9NY30 223 aa29.7■■■□□ 2.35
CHAF1A-203ENST00000585854 COL14A1Q05707 1796 aaKnown RBP29.68■■■□□ 2.34
CHAF1A-203ENST00000585854 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
CHAF1A-203ENST00000585854 DEFB132Q7Z7B7 95 aa29.67■■■□□ 2.34
CHAF1A-203ENST00000585854 FAM98CQ17RN3 349 aaKnown RBP29.65■■■□□ 2.34
CHAF1A-203ENST00000585854 NUDT16Q96DE0 195 aaKnown RBP29.65■■■□□ 2.34
CHAF1A-203ENST00000585854 CRYBG1Q9Y4K1 1723 aa29.64■■■□□ 2.34
CHAF1A-203ENST00000585854 ATP7BP35670 1465 aa29.63■■■□□ 2.33
CHAF1A-203ENST00000585854 ONECUT3O60422 494 aaPredicted RBP29.63■■■□□ 2.33
CHAF1A-203ENST00000585854 CDK19Q9BWU1 502 aa29.61■■■□□ 2.33
CHAF1A-203ENST00000585854 PRDM11Q9NQV5 511 aa29.61■■■□□ 2.33
CHAF1A-203ENST00000585854 KIAA1210Q9ULL0 1709 aa29.59■■■□□ 2.33
CHAF1A-203ENST00000585854 NUTM2GQ5VZR2 741 aa29.58■■■□□ 2.33
CHAF1A-203ENST00000585854 PHRF1Q9P1Y6 1649 aaKnown RBP29.56■■■□□ 2.32
CHAF1A-203ENST00000585854 TOPAZ1Q8N9V7 1692 aa29.54■■■□□ 2.32
CHAF1A-203ENST00000585854 SPATA31A5Q5VU36 1347 aa29.53■■■□□ 2.32
CHAF1A-203ENST00000585854 SPATA31A7Q8IWB4 1347 aa29.53■■■□□ 2.32
CHAF1A-203ENST00000585854 CHRNA2Q15822 529 aa29.53■■■□□ 2.32
CHAF1A-203ENST00000585854 NBPF1Q3BBV0 1214 aa29.53■■■□□ 2.32
CHAF1A-203ENST00000585854 KIAA0232Q92628 1395 aa29.52■■■□□ 2.32
CHAF1A-203ENST00000585854 ACEP12821 1306 aa29.52■■■□□ 2.32
CHAF1A-203ENST00000585854 ZC3H6P61129 1189 aaKnown RBP29.52■■■□□ 2.32
CHAF1A-203ENST00000585854 FAM182BQ5T319 152 aa29.51■■■□□ 2.31
CHAF1A-203ENST00000585854 STRN4Q9NRL3 753 aa29.51■■■□□ 2.31
CHAF1A-203ENST00000585854 CCDC61Q9Y6R9 512 aa29.51■■■□□ 2.31
CHAF1A-203ENST00000585854 BAG6P46379 1132 aa29.5■■■□□ 2.31
CHAF1A-203ENST00000585854 SRCAPQ6ZRS2 3230 aa29.5■■■□□ 2.31
CHAF1A-203ENST00000585854 NBPF8Q3BBV2 869 aa29.49■■■□□ 2.31
CHAF1A-203ENST00000585854 SRPK2P78362 688 aaKnown RBP29.48■■■□□ 2.31
CHAF1A-203ENST00000585854 RGPD1P0DJD0 1748 aa29.47■■■□□ 2.31
CHAF1A-203ENST00000585854 POLR3AO14802 1390 aaPredicted RBP29.47■■■□□ 2.31
CHAF1A-203ENST00000585854 THSD7AQ9UPZ6 1657 aa29.46■■■□□ 2.31
CHAF1A-203ENST00000585854 ABTB2Q8N961 1025 aa29.45■■■□□ 2.31
CHAF1A-203ENST00000585854 PLEKHG3A1L390 1219 aa29.44■■■□□ 2.3
CHAF1A-203ENST00000585854 CENPJQ9HC77 1338 aaPredicted RBP29.44■■■□□ 2.3
CHAF1A-203ENST00000585854 EVA1CP58658 441 aa29.43■■■□□ 2.3
CHAF1A-203ENST00000585854 USP35Q9P2H5 1018 aa29.43■■■□□ 2.3
CHAF1A-203ENST00000585854 QRICH2Q9H0J4 1663 aa29.43■■■□□ 2.3
CHAF1A-203ENST00000585854 SPATA31A1Q5TZJ5 1347 aa29.43■■■□□ 2.3
CHAF1A-203ENST00000585854 PSDA5PKW4 1024 aaPredicted RBP29.41■■■□□ 2.3
CHAF1A-203ENST00000585854 EN1Q05925 392 aaPredicted RBP29.41■■■□□ 2.3
CHAF1A-203ENST00000585854 PPIP5K1Q6PFW1 1433 aa29.41■■■□□ 2.3
CHAF1A-203ENST00000585854 CABP2Q9NPB3 220 aa29.41■■■□□ 2.3
CHAF1A-203ENST00000585854 NRKQ7Z2Y5 1582 aa29.4■■■□□ 2.3
CHAF1A-203ENST00000585854 TNS1Q9HBL0 1735 aaKnown RBP29.37■■■□□ 2.29
CHAF1A-203ENST00000585854 NLRP13Q86W25 1043 aa29.35■■■□□ 2.29
CHAF1A-203ENST00000585854 SSH2Q76I76 1423 aa29.35■■■□□ 2.29
CHAF1A-203ENST00000585854 ZBTB7CA1YPR0 619 aa29.34■■■□□ 2.29
CHAF1A-203ENST00000585854 CAMTA1Q9Y6Y1 1673 aa29.34■■■□□ 2.29
CHAF1A-203ENST00000585854 L3MBTL2Q969R5 705 aa29.33■■■□□ 2.29
CHAF1A-203ENST00000585854 TRIM37O94972 964 aa29.32■■■□□ 2.28
CHAF1A-203ENST00000585854 LARP1Q6PKG0 1096 aaKnown RBP29.32■■■□□ 2.28
CHAF1A-203ENST00000585854 USP19O94966 1318 aa29.31■■■□□ 2.28
CHAF1A-203ENST00000585854 FAM196AQ6ZSG2 479 aa29.31■■■□□ 2.28
CHAF1A-203ENST00000585854 LMO7Q8WWI1 1683 aa29.31■■■□□ 2.28
CHAF1A-203ENST00000585854 GCP02774 474 aa29.3■■■□□ 2.28
CHAF1A-203ENST00000585854 PDE3BQ13370 1112 aa29.3■■■□□ 2.28
CHAF1A-203ENST00000585854 SIN3AQ96ST3 1273 aa29.3■■■□□ 2.28
CHAF1A-203ENST00000585854 CABP1Q9NZU7 370 aa29.3■■■□□ 2.28
CHAF1A-203ENST00000585854 CPDO75976 1380 aa29.29■■■□□ 2.28
CHAF1A-203ENST00000585854 LRP5O75197 1615 aa29.29■■■□□ 2.28
CHAF1A-203ENST00000585854 NEUROD1Q13562 356 aa29.28■■■□□ 2.28
CHAF1A-203ENST00000585854 EZH2Q15910 746 aaKnown RBP29.28■■■□□ 2.28
CHAF1A-203ENST00000585854 TRPM1Q7Z4N2 1603 aa29.27■■■□□ 2.28
CHAF1A-203ENST00000585854 BARGINQ6ZT62 677 aa29.27■■■□□ 2.28
CHAF1A-203ENST00000585854 TCP11L2Q8N4U5 519 aa29.27■■■□□ 2.28
CHAF1A-203ENST00000585854 NLRP6P59044 892 aa29.26■■■□□ 2.27
CHAF1A-203ENST00000585854 R3HDM1Q15032 1099 aaKnown RBP29.26■■■□□ 2.27
CHAF1A-203ENST00000585854 DISP2A7MBM2 1401 aa29.25■■■□□ 2.27
CHAF1A-203ENST00000585854 USP6P35125 1406 aa29.25■■■□□ 2.27
CHAF1A-203ENST00000585854 EVC2Q86UK5 1308 aa29.24■■■□□ 2.27
CHAF1A-203ENST00000585854 APBA3O96018 575 aa29.24■■■□□ 2.27
CHAF1A-203ENST00000585854 BRD4O60885 1362 aaPredicted RBP29.24■■■□□ 2.27
CHAF1A-203ENST00000585854 COL5A2P05997 1499 aaPredicted RBP29.22■■■□□ 2.27
CHAF1A-203ENST00000585854 ROCK2O75116 1388 aaKnown RBP29.21■■■□□ 2.27
CHAF1A-203ENST00000585854 CAMKK2Q96RR4 588 aa29.19■■■□□ 2.26
CHAF1A-203ENST00000585854 PIK3C2AO00443 1686 aa29.18■■■□□ 2.26
CHAF1A-203ENST00000585854 THRAP3Q9Y2W1 955 aaKnown RBP29.18■■■□□ 2.26
CHAF1A-203ENST00000585854 PARP4Q9UKK3 1724 aaKnown RBP29.17■■■□□ 2.26
CHAF1A-203ENST00000585854 SLIT3O75094 1523 aa29.17■■■□□ 2.26
CHAF1A-203ENST00000585854 CRB1P82279 1406 aa29.16■■■□□ 2.26
CHAF1A-203ENST00000585854 AKAP12Q02952 1782 aa29.16■■■□□ 2.26
CHAF1A-203ENST00000585854 SOX12O15370 315 aa29.14■■■□□ 2.26
CHAF1A-203ENST00000585854 AATKQ6ZMQ8 1374 aa29.13■■■□□ 2.25
CHAF1A-203ENST00000585854 TOM1L2Q6ZVM7 507 aa29.13■■■□□ 2.25
CHAF1A-203ENST00000585854 RGPD5Q99666 1765 aa29.13■■■□□ 2.25
CHAF1A-203ENST00000585854 RREB1Q92766 1687 aa29.12■■■□□ 2.25
CHAF1A-203ENST00000585854 PARD3Q8TEW0 1356 aa29.12■■■□□ 2.25
CHAF1A-203ENST00000585854 COL18A1P39060 1754 aa29.11■■■□□ 2.25
CHAF1A-203ENST00000585854 TTC21BQ7Z4L5 1316 aa29.11■■■□□ 2.25
CHAF1A-203ENST00000585854 NUP188Q5SRE5 1749 aa29.11■■■□□ 2.25
CHAF1A-203ENST00000585854 ZNF692Q9BU19 519 aaPredicted RBP29.1■■■□□ 2.25
CHAF1A-203ENST00000585854 LRRC37A3O60309 1634 aa29.08■■■□□ 2.25
CHAF1A-203ENST00000585854 WNK3Q9BYP7 1800 aa29.08■■■□□ 2.25
CHAF1A-203ENST00000585854 CPSF1Q10570 1443 aaKnown RBP29.06■■■□□ 2.24
CHAF1A-203ENST00000585854 DDB1Q16531 1140 aa29.06■■■□□ 2.24
CHAF1A-203ENST00000585854 NBPF14Q5TI25 921 aa29.06■■■□□ 2.24
CHAF1A-203ENST00000585854 AXIN2Q9Y2T1 843 aa29.06■■■□□ 2.24
CHAF1A-203ENST00000585854 SBF2Q86WG5 1849 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms