RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
ATG4D-202ENST00000585437 GLI3P10071 1580 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 ATRNO75882 1429 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 USP6P35125 1406 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 SSH2Q76I76 1423 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 MYOM1P52179 1685 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 LMO7Q8WWI1 1683 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
ATG4D-202ENST00000585437 C8orf37Q96NL8 207 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 ACEP12821 1306 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
ATG4D-202ENST00000585437 SLIT3O75094 1523 aa12.29□□□□□ -0.44
ATG4D-202ENST00000585437 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
ATG4D-202ENST00000585437 NGDNQ8NEJ9 315 aaKnown RBP12.29□□□□□ -0.44
ATG4D-202ENST00000585437 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
ATG4D-202ENST00000585437 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
ATG4D-202ENST00000585437 CD163L1Q9NR16 1453 aa12.28□□□□□ -0.44
ATG4D-202ENST00000585437 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
ATG4D-202ENST00000585437 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
ATG4D-202ENST00000585437 RGS12O14924 1447 aa12.28□□□□□ -0.44
ATG4D-202ENST00000585437 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.44
ATG4D-202ENST00000585437 COL18A1P39060 1754 aa12.26□□□□□ -0.45
ATG4D-202ENST00000585437 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
ATG4D-202ENST00000585437 TESK2Q96S53 571 aa12.26□□□□□ -0.45
ATG4D-202ENST00000585437 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
ATG4D-202ENST00000585437 USP19O94966 1318 aa12.25□□□□□ -0.45
ATG4D-202ENST00000585437 USP47Q96K76 1375 aa12.25□□□□□ -0.45
ATG4D-202ENST00000585437 WNK3Q9BYP7 1800 aa12.25□□□□□ -0.45
ATG4D-202ENST00000585437 LTN1O94822 1766 aa12.24□□□□□ -0.45
ATG4D-202ENST00000585437 USP21Q9UK80 565 aa12.24□□□□□ -0.45
ATG4D-202ENST00000585437 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
ATG4D-202ENST00000585437 THSD7AQ9UPZ6 1657 aa12.23□□□□□ -0.45
ATG4D-202ENST00000585437 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
ATG4D-202ENST00000585437 CABP1Q9NZU7 370 aa12.23□□□□□ -0.45
ATG4D-202ENST00000585437 EP400Q96L91 3159 aa12.23□□□□□ -0.45
ATG4D-202ENST00000585437 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
ATG4D-202ENST00000585437 NFAT5O94916 1531 aa12.22□□□□□ -0.45
ATG4D-202ENST00000585437 RXRBP28702 533 aa12.22□□□□□ -0.45
ATG4D-202ENST00000585437 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
ATG4D-202ENST00000585437 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
ATG4D-202ENST00000585437 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
ATG4D-202ENST00000585437 TRPC5Q9UL62 973 aaPredicted RBP12.22□□□□□ -0.45
ATG4D-202ENST00000585437 ABCC6O95255 1503 aa12.21□□□□□ -0.45
ATG4D-202ENST00000585437 CPDO75976 1380 aa12.21□□□□□ -0.45
ATG4D-202ENST00000585437 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
ATG4D-202ENST00000585437 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.45
ATG4D-202ENST00000585437 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
ATG4D-202ENST00000585437 UNC5CLQ8IV45 518 aa12.21□□□□□ -0.45
ATG4D-202ENST00000585437 CAMTA1Q9Y6Y1 1673 aa12.2□□□□□ -0.46
ATG4D-202ENST00000585437 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
ATG4D-202ENST00000585437 A0A1W2PP64 1363 aa12.19□□□□□ -0.46
ATG4D-202ENST00000585437 KTN1Q86UP2 1357 aaKnown RBP12.19□□□□□ -0.46
ATG4D-202ENST00000585437 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
ATG4D-202ENST00000585437 TTC21AQ8NDW8 1320 aa12.19□□□□□ -0.46
ATG4D-202ENST00000585437 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
ATG4D-202ENST00000585437 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-202ENST00000585437 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-202ENST00000585437 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
ATG4D-202ENST00000585437 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
ATG4D-202ENST00000585437 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
ATG4D-202ENST00000585437 PARP4Q9UKK3 1724 aaKnown RBP12.17□□□□□ -0.46
ATG4D-202ENST00000585437 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
ATG4D-202ENST00000585437 VPS72Q15906 364 aa12.17□□□□□ -0.46
ATG4D-202ENST00000585437 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
ATG4D-202ENST00000585437 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
ATG4D-202ENST00000585437 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
ATG4D-202ENST00000585437 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
ATG4D-202ENST00000585437 USP31Q70CQ4 1352 aa12.17□□□□□ -0.46
ATG4D-202ENST00000585437 COL5A2P05997 1499 aaPredicted RBP12.16□□□□□ -0.46
ATG4D-202ENST00000585437 NUTM2GQ5VZR2 741 aa12.16□□□□□ -0.46
ATG4D-202ENST00000585437 NLRP13Q86W25 1043 aa12.16□□□□□ -0.46
ATG4D-202ENST00000585437 FAM208AQ9UK61 1670 aaKnown RBP12.16□□□□□ -0.46
ATG4D-202ENST00000585437 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
ATG4D-202ENST00000585437 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
ATG4D-202ENST00000585437 BTG4Q9NY30 223 aa12.15□□□□□ -0.46
ATG4D-202ENST00000585437 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
ATG4D-202ENST00000585437 GCP02774 474 aa12.14□□□□□ -0.47
ATG4D-202ENST00000585437 LRRC37A3O60309 1634 aa12.13□□□□□ -0.47
ATG4D-202ENST00000585437 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
ATG4D-202ENST00000585437 NLRP6P59044 892 aa12.13□□□□□ -0.47
ATG4D-202ENST00000585437 TMF1P82094 1093 aa12.13□□□□□ -0.47
ATG4D-202ENST00000585437 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
ATG4D-202ENST00000585437 TNS1Q9HBL0 1735 aaKnown RBP12.13□□□□□ -0.47
ATG4D-202ENST00000585437 AATKQ6ZMQ8 1374 aa12.13□□□□□ -0.47
ATG4D-202ENST00000585437 RGPD1P0DJD0 1748 aa12.12□□□□□ -0.47
ATG4D-202ENST00000585437 ZC3H6P61129 1189 aaKnown RBP12.12□□□□□ -0.47
ATG4D-202ENST00000585437 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
ATG4D-202ENST00000585437 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
ATG4D-202ENST00000585437 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
ATG4D-202ENST00000585437 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
ATG4D-202ENST00000585437 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
ATG4D-202ENST00000585437 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
ATG4D-202ENST00000585437 TMC1Q8TDI8 760 aa12.1□□□□□ -0.47
ATG4D-202ENST00000585437 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■□□□□ 9.9
ATG4D-202ENST00000585437 SPATA31A1Q5TZJ5 1347 aa12.1□□□□□ -0.47
ATG4D-202ENST00000585437 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
ATG4D-202ENST00000585437 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
ATG4D-202ENST00000585437 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
ATG4D-202ENST00000585437 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms