RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, human

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDEL1-219	ENST00000585098	ST20-MTHFS	A0A0A6YYL1	179 aa		33.42	■■■□□ 2.94
NDEL1-219	ENST00000585098	QTRT2	Q9H974	415 aa	Known RBP	33.41	■■■□□ 2.94
NDEL1-219	ENST00000585098	ATAD2	Q6PL18	1390 aa		33.41	■■■□□ 2.94
NDEL1-219	ENST00000585098	MARF1	Q9Y4F3	1742 aa	Known RBP	33.4	■■■□□ 2.94
NDEL1-219	ENST00000585098	RXRB	P28702	533 aa		33.39	■■■□□ 2.94
NDEL1-219	ENST00000585098	USP47	Q96K76	1375 aa		33.37	■■■□□ 2.93
NDEL1-219	ENST00000585098	ABCA3	Q99758	1704 aa		33.37	■■■□□ 2.93
NDEL1-219	ENST00000585098	TESK2	Q96S53	571 aa		33.37	■■■□□ 2.93
NDEL1-219	ENST00000585098	NUTM2G	Q5VZR2	741 aa		33.35	■■■□□ 2.93
NDEL1-219	ENST00000585098	ABTB2	Q8N961	1025 aa		33.34	■■■□□ 2.93
NDEL1-219	ENST00000585098	USP6	P35125	1406 aa		33.34	■■■□□ 2.93
NDEL1-219	ENST00000585098	BCL9L	Q86UU0	1499 aa		33.33	■■■□□ 2.93
NDEL1-219	ENST00000585098	TRPC5	Q9UL62	973 aa	Predicted RBP	33.33	■■■□□ 2.93
NDEL1-219	ENST00000585098	BRD4	O60885	1362 aa	Predicted RBP	33.33	■■■□□ 2.93
NDEL1-219	ENST00000585098	RBM6	P78332	1123 aa	Known RBP	33.31	■■■□□ 2.92
NDEL1-219	ENST00000585098	SLIT2	O94813	1529 aa		33.3	■■■□□ 2.92
NDEL1-219	ENST00000585098	SLC24A1	O60721	1099 aa		33.3	■■■□□ 2.92
NDEL1-219	ENST00000585098	ZNF692	Q9BU19	519 aa	Predicted RBP	33.3	■■■□□ 2.92
NDEL1-219	ENST00000585098	FAM83G	A6ND36	823 aa		33.28	■■■□□ 2.92
NDEL1-219	ENST00000585098	PUS7	Q96PZ0	661 aa	Known RBP	33.28	■■■□□ 2.92
NDEL1-219	ENST00000585098	CRYBG1	Q9Y4K1	1723 aa		33.28	■■■□□ 2.92
NDEL1-219	ENST00000585098	ATRN	O75882	1429 aa		33.28	■■■□□ 2.92
NDEL1-219	ENST00000585098	UNC5CL	Q8IV45	518 aa		33.27	■■■□□ 2.92
NDEL1-219	ENST00000585098	TMC1	Q8TDI8	760 aa		33.27	■■■□□ 2.92
NDEL1-219	ENST00000585098	CPSF1	Q10570	1443 aa	Known RBP	33.26	■■■□□ 2.91
NDEL1-219	ENST00000585098	SSH2	Q76I76	1423 aa		33.26	■■■□□ 2.91
NDEL1-219	ENST00000585098	NLRP13	Q86W25	1043 aa		33.25	■■■□□ 2.91
NDEL1-219	ENST00000585098	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.24	■■■□□ 2.91
NDEL1-219	ENST00000585098	SLC12A5	Q9H2X9	1139 aa		33.23	■■■□□ 2.91
NDEL1-219	ENST00000585098	KTN1	Q86UP2	1357 aa	Known RBP	33.22	■■■□□ 2.91
NDEL1-219	ENST00000585098	TMF1	P82094	1093 aa		33.22	■■■□□ 2.91
NDEL1-219	ENST00000585098	USP19	O94966	1318 aa		33.22	■■■□□ 2.91
NDEL1-219	ENST00000585098	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.21	■■■□□ 2.91
NDEL1-219	ENST00000585098	PRDM11	Q9NQV5	511 aa		33.21	■■■□□ 2.91
NDEL1-219	ENST00000585098	TTC21B	Q7Z4L5	1316 aa		33.21	■■■□□ 2.91
NDEL1-219	ENST00000585098	AKAP12	Q02952	1782 aa		33.21	■■■□□ 2.91
NDEL1-219	ENST00000585098	NLRP6	P59044	892 aa		33.2	■■■□□ 2.91
NDEL1-219	ENST00000585098	PLCH1	Q4KWH8	1693 aa		33.2	■■■□□ 2.9
NDEL1-219	ENST00000585098	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.19	■■■□□ 2.9
NDEL1-219	ENST00000585098	ZC3H6	P61129	1189 aa	Known RBP	33.19	■■■□□ 2.9
NDEL1-219	ENST00000585098	KIAA0232	Q92628	1395 aa		33.19	■■■□□ 2.9
NDEL1-219	ENST00000585098	CD163L1	Q9NR16	1453 aa		33.18	■■■□□ 2.9
NDEL1-219	ENST00000585098	GJD4	Q96KN9	370 aa	Predicted RBP	33.18	■■■□□ 2.9
NDEL1-219	ENST00000585098	BTG4	Q9NY30	223 aa		33.18	■■■□□ 2.9
NDEL1-219	ENST00000585098	RGS12	O14924	1447 aa		33.18	■■■□□ 2.9
NDEL1-219	ENST00000585098	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.17	■■■□□ 2.9
NDEL1-219	ENST00000585098	NWD2	Q9ULI1	1742 aa		33.16	■■■□□ 2.9
NDEL1-219	ENST00000585098	COL14A1	Q05707	1796 aa	Known RBP	33.16	■■■□□ 2.9
NDEL1-219	ENST00000585098	TTC21A	Q8NDW8	1320 aa		33.16	■■■□□ 2.9
NDEL1-219	ENST00000585098	GC	P02774	474 aa		33.15	■■■□□ 2.9
NDEL1-219	ENST00000585098	NRK	Q7Z2Y5	1582 aa		33.15	■■■□□ 2.9
NDEL1-219	ENST00000585098	TERF2IP	Q9NYB0	399 aa		33.15	■■■□□ 2.9
NDEL1-219	ENST00000585098	CHRNA2	Q15822	529 aa		33.14	■■■□□ 2.9
NDEL1-219	ENST00000585098	VPS72	Q15906	364 aa		33.14	■■■□□ 2.9
NDEL1-219	ENST00000585098	PIK3C2A	O00443	1686 aa		33.13	■■■□□ 2.89
NDEL1-219	ENST00000585098	NINL	Q9Y2I6	1382 aa		33.13	■■■□□ 2.89
NDEL1-219	ENST00000585098	MON2	Q7Z3U7	1717 aa		33.12	■■■□□ 2.89
NDEL1-219	ENST00000585098	CCDC9	Q9Y3X0	531 aa	Known RBP	33.12	■■■□□ 2.89
NDEL1-219	ENST00000585098		A0A1W2PP64	1363 aa		33.11	■■■□□ 2.89
NDEL1-219	ENST00000585098	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.11	■■■□□ 2.89	3e-9	■■■■□ 20
NDEL1-219	ENST00000585098	CDCA8	Q53HL2	280 aa		33.1	■■■□□ 2.89
NDEL1-219	ENST00000585098	CPD	O75976	1380 aa		33.09	■■■□□ 2.89
NDEL1-219	ENST00000585098	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
NDEL1-219	ENST00000585098	GLI3	P10071	1580 aa		33.08	■■■□□ 2.89
NDEL1-219	ENST00000585098	NRAP	Q86VF7	1730 aa		33.08	■■■□□ 2.89
NDEL1-219	ENST00000585098	SLIT3	O75094	1523 aa		33.07	■■■□□ 2.89
NDEL1-219	ENST00000585098	EDC4	Q6P2E9	1401 aa	Known RBP	33.06	■■■□□ 2.88
NDEL1-219	ENST00000585098	HSPA5	P11021	654 aa	Known RBP	33.04	■■■□□ 2.88
NDEL1-219	ENST00000585098	NME9	Q86XW9	330 aa		33.04	■■■□□ 2.88
NDEL1-219	ENST00000585098	ZRANB1	Q9UGI0	708 aa		33.03	■■■□□ 2.88
NDEL1-219	ENST00000585098	ZBTB7C	A1YPR0	619 aa		33.02	■■■□□ 2.88
NDEL1-219	ENST00000585098	KCNH5	Q8NCM2	988 aa		33.01	■■■□□ 2.87
NDEL1-219	ENST00000585098	STRN4	Q9NRL3	753 aa		33.01	■■■□□ 2.87
NDEL1-219	ENST00000585098	USP31	Q70CQ4	1352 aa		33	■■■□□ 2.87
NDEL1-219	ENST00000585098	ANKRD36B	Q8N2N9	1353 aa		33	■■■□□ 2.87
NDEL1-219	ENST00000585098	SOX12	O15370	315 aa		33	■■■□□ 2.87
NDEL1-219	ENST00000585098	EVA1C	P58658	441 aa		32.98	■■■□□ 2.87
NDEL1-219	ENST00000585098	SPATA31A5	Q5VU36	1347 aa		32.98	■■■□□ 2.87
NDEL1-219	ENST00000585098	SPATA31A7	Q8IWB4	1347 aa		32.98	■■■□□ 2.87
NDEL1-219	ENST00000585098	CAMTA1	Q9Y6Y1	1673 aa		32.97	■■■□□ 2.87
NDEL1-219	ENST00000585098	LMO7	Q8WWI1	1683 aa		32.96	■■■□□ 2.87
NDEL1-219	ENST00000585098	AATK	Q6ZMQ8	1374 aa		32.95	■■■□□ 2.86
NDEL1-219	ENST00000585098	ONECUT3	O60422	494 aa	Predicted RBP	32.94	■■■□□ 2.86
NDEL1-219	ENST00000585098	ARHGEF25	Q86VW2	580 aa		32.94	■■■□□ 2.86
NDEL1-219	ENST00000585098	SEPT12	Q8IYM1	358 aa		32.94	■■■□□ 2.86
NDEL1-219	ENST00000585098	FAM98C	Q17RN3	349 aa	Known RBP	32.93	■■■□□ 2.86
NDEL1-219	ENST00000585098	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.93	■■■□□ 2.86	7e-9	■■■■□ 21.2
NDEL1-219	ENST00000585098	POLR3GL	Q9BT43	218 aa		32.92	■■■□□ 2.86
NDEL1-219	ENST00000585098	SPATA31A1	Q5TZJ5	1347 aa		32.91	■■■□□ 2.86
NDEL1-219	ENST00000585098	NFAT5	O94916	1531 aa		32.91	■■■□□ 2.86
NDEL1-219	ENST00000585098	USP54	Q70EL1	1684 aa		32.91	■■■□□ 2.86
NDEL1-219	ENST00000585098		A0A0G2JS52	829 aa		32.9	■■■□□ 2.86
NDEL1-219	ENST00000585098	MYT1	Q01538	1121 aa		32.9	■■■□□ 2.86
NDEL1-219	ENST00000585098	LARP1	Q6PKG0	1096 aa	Known RBP	32.9	■■■□□ 2.86
NDEL1-219	ENST00000585098	OVOS2	A0A0J9YW53	1432 aa		32.89	■■■□□ 2.86
NDEL1-219	ENST00000585098	OVOS2	Q6IE36	1432 aa		32.89	■■■□□ 2.86
NDEL1-219	ENST00000585098	COL5A2	P05997	1499 aa	Predicted RBP	32.88	■■■□□ 2.85
NDEL1-219	ENST00000585098	USP35	Q9P2H5	1018 aa		32.87	■■■□□ 2.85
NDEL1-219	ENST00000585098	MYOM1	P52179	1685 aa		32.87	■■■□□ 2.85
NDEL1-219	ENST00000585098	AXIN2	Q9Y2T1	843 aa		32.86	■■■□□ 2.85

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