RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ZNF692Q9BU19 519 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 FYB1O15117 783 aa19.93■□□□□ 0.78
CDK5RAP3-236ENST00000584991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDK5RAP3-236ENST00000584991 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
CDK5RAP3-236ENST00000584991 TMEM94Q12767 1356 aa19.93■□□□□ 0.78
CDK5RAP3-236ENST00000584991 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
CDK5RAP3-236ENST00000584991 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
CDK5RAP3-236ENST00000584991 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-236ENST00000584991 ZNF335Q9H4Z2 1342 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-236ENST00000584991 IRX6P78412 446 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-236ENST00000584991 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
CDK5RAP3-236ENST00000584991 C19orf44Q9H6X5 657 aa19.9■□□□□ 0.78
CDK5RAP3-236ENST00000584991 DMRT2Q9Y5R5 561 aa19.9■□□□□ 0.78
CDK5RAP3-236ENST00000584991 POLR3AO14802 1390 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-236ENST00000584991 NCOA3Q9Y6Q9 1424 aa19.88■□□□□ 0.77
CDK5RAP3-236ENST00000584991 NRKQ7Z2Y5 1582 aa19.87■□□□□ 0.77
CDK5RAP3-236ENST00000584991 XIRP1Q702N8 1843 aaKnown RBP19.87■□□□□ 0.77
CDK5RAP3-236ENST00000584991 USP6P35125 1406 aa19.87■□□□□ 0.77
CDK5RAP3-236ENST00000584991 NME9Q86XW9 330 aa19.86■□□□□ 0.77
CDK5RAP3-236ENST00000584991 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
CDK5RAP3-236ENST00000584991 TTC21BQ7Z4L5 1316 aa19.85■□□□□ 0.77
CDK5RAP3-236ENST00000584991 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
CDK5RAP3-236ENST00000584991 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
CDK5RAP3-236ENST00000584991 LRRC7Q96NW7 1537 aa19.84■□□□□ 0.77
CDK5RAP3-236ENST00000584991 ATF3P18847 181 aa19.84■□□□□ 0.77
CDK5RAP3-236ENST00000584991 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
CDK5RAP3-236ENST00000584991 SSH2Q76I76 1423 aa19.82■□□□□ 0.76
CDK5RAP3-236ENST00000584991 DCCP43146 1447 aa19.82■□□□□ 0.76
CDK5RAP3-236ENST00000584991 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
CDK5RAP3-236ENST00000584991 MSH6P52701 1360 aa19.81■□□□□ 0.76
CDK5RAP3-236ENST00000584991 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
CDK5RAP3-236ENST00000584991 MTHFSP49914 203 aa19.8■□□□□ 0.76
CDK5RAP3-236ENST00000584991 COG3Q96JB2 828 aa19.8■□□□□ 0.76
CDK5RAP3-236ENST00000584991 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
CDK5RAP3-236ENST00000584991 TTC21AQ8NDW8 1320 aa19.79■□□□□ 0.76
CDK5RAP3-236ENST00000584991 MST1RQ04912 1400 aa19.79■□□□□ 0.76
CDK5RAP3-236ENST00000584991 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-236ENST00000584991 FBLN1P23142 703 aa19.76■□□□□ 0.75
CDK5RAP3-236ENST00000584991 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
CDK5RAP3-236ENST00000584991 PSME1Q06323 249 aa19.75■□□□□ 0.75
CDK5RAP3-236ENST00000584991 WDR43Q15061 677 aaKnown RBP eCLIP19.75■□□□□ 0.75
CDK5RAP3-236ENST00000584991 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
CDK5RAP3-236ENST00000584991 PAK3O75914 559 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-236ENST00000584991 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
CDK5RAP3-236ENST00000584991 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
CDK5RAP3-236ENST00000584991 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
CDK5RAP3-236ENST00000584991 FOXO3O43524 673 aa19.74■□□□□ 0.75
CDK5RAP3-236ENST00000584991 CFAP53Q96M91 514 aa19.74■□□□□ 0.75
CDK5RAP3-236ENST00000584991 ADAMTS8Q9UP79 889 aa19.73■□□□□ 0.75
CDK5RAP3-236ENST00000584991 POLKQ9UBT6 870 aa19.72■□□□□ 0.75
CDK5RAP3-236ENST00000584991 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
CDK5RAP3-236ENST00000584991 AATKQ6ZMQ8 1374 aa19.71■□□□□ 0.75
CDK5RAP3-236ENST00000584991 USP31Q70CQ4 1352 aa19.71■□□□□ 0.75
CDK5RAP3-236ENST00000584991 XPCQ01831 940 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-236ENST00000584991 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
CDK5RAP3-236ENST00000584991 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
CDK5RAP3-236ENST00000584991 BLMP54132 1417 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-236ENST00000584991 NLRP6P59044 892 aa19.7■□□□□ 0.74
CDK5RAP3-236ENST00000584991 NUTM2GQ5VZR2 741 aa19.7■□□□□ 0.74
CDK5RAP3-236ENST00000584991 SENP3-EIF4A1A0A087X0R7 540 aa19.69■□□□□ 0.74
CDK5RAP3-236ENST00000584991 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP3-236ENST00000584991 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
CDK5RAP3-236ENST00000584991 MARF1Q9Y4F3 1742 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-236ENST00000584991 RRS1Q15050 365 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-236ENST00000584991 KRT28Q7Z3Y7 464 aa19.69■□□□□ 0.74
CDK5RAP3-236ENST00000584991 MSH5O43196 834 aa19.68■□□□□ 0.74
CDK5RAP3-236ENST00000584991 USP54Q70EL1 1684 aa19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 SOX12O15370 315 aa19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 COL3A1P02461 1466 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 TRPM3Q9HCF6 1732 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 PNPLA6Q8IY17 1366 aa19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
CDK5RAP3-236ENST00000584991 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
CDK5RAP3-236ENST00000584991 DDX17Q92841 729 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-236ENST00000584991 RRP1P56182 461 aaKnown RBP19.65■□□□□ 0.74
CDK5RAP3-236ENST00000584991 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
CDK5RAP3-236ENST00000584991 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
CDK5RAP3-236ENST00000584991 DIAPH1O60610 1272 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-236ENST00000584991 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-236ENST00000584991 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
CDK5RAP3-236ENST00000584991 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
CDK5RAP3-236ENST00000584991 NPHP3Q7Z494 1330 aa19.62■□□□□ 0.73
CDK5RAP3-236ENST00000584991 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
CDK5RAP3-236ENST00000584991 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-236ENST00000584991 U2AF1L5P0DN76 240 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-236ENST00000584991 U2AF1Q01081 240 aaKnown RBP eCLIP19.6■□□□□ 0.736e-9■■■□□ 17
CDK5RAP3-236ENST00000584991 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-236ENST00000584991 PEAK1Q9H792 1746 aa19.6■□□□□ 0.73
CDK5RAP3-236ENST00000584991 ALS2Q96Q42 1657 aa19.6■□□□□ 0.73
CDK5RAP3-236ENST00000584991 MAP3K19Q56UN5 1328 aa19.59■□□□□ 0.73
CDK5RAP3-236ENST00000584991 PXDNQ92626 1479 aa19.58■□□□□ 0.72
CDK5RAP3-236ENST00000584991 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
CDK5RAP3-236ENST00000584991 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
CDK5RAP3-236ENST00000584991 IL13P35225 146 aa19.56■□□□□ 0.72
CDK5RAP3-236ENST00000584991 AMPHP49418 695 aa19.56■□□□□ 0.72
CDK5RAP3-236ENST00000584991 HSP90AB2PQ58FF8 381 aa19.55■□□□□ 0.72
CDK5RAP3-236ENST00000584991 LTN1O94822 1766 aa19.55■□□□□ 0.72
CDK5RAP3-236ENST00000584991 NFAT5O94916 1531 aa19.55■□□□□ 0.72
CDK5RAP3-236ENST00000584991 APAF1O14727 1248 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms