RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 RALGAPBQ86X10 1494 aa24.54■■□□□ 1.52
ITGB4-213ENST00000584939 VPS72Q15906 364 aa24.54■■□□□ 1.52
ITGB4-213ENST00000584939 ABCA3Q99758 1704 aa24.54■■□□□ 1.52
ITGB4-213ENST00000584939 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.54■■□□□ 1.52
ITGB4-213ENST00000584939 ATAD2Q6PL18 1390 aa24.54■■□□□ 1.52
ITGB4-213ENST00000584939 CCDC9Q9Y3X0 531 aaKnown RBP24.52■■□□□ 1.52
ITGB4-213ENST00000584939 TRPM1Q7Z4N2 1603 aa24.52■■□□□ 1.52
ITGB4-213ENST00000584939 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
ITGB4-213ENST00000584939 NUTM2GQ5VZR2 741 aa24.5■■□□□ 1.51
ITGB4-213ENST00000584939 BTG4Q9NY30 223 aa24.5■■□□□ 1.51
ITGB4-213ENST00000584939 PPIP5K1Q6PFW1 1433 aa24.5■■□□□ 1.51
ITGB4-213ENST00000584939 GLI3P10071 1580 aa24.49■■□□□ 1.51
ITGB4-213ENST00000584939 PLCH1Q4KWH8 1693 aa24.48■■□□□ 1.51
ITGB4-213ENST00000584939 EVC2Q86UK5 1308 aa24.48■■□□□ 1.51
ITGB4-213ENST00000584939 QRICH2Q9H0J4 1663 aa24.48■■□□□ 1.51
ITGB4-213ENST00000584939 PRDM11Q9NQV5 511 aa24.47■■□□□ 1.51
ITGB4-213ENST00000584939 CABP1Q9NZU7 370 aa24.47■■□□□ 1.51
ITGB4-213ENST00000584939 NWD2Q9ULI1 1742 aa24.47■■□□□ 1.51
ITGB4-213ENST00000584939 TONSLQ96HA7 1378 aa24.46■■□□□ 1.51
ITGB4-213ENST00000584939 ABTB2Q8N961 1025 aa24.46■■□□□ 1.51
ITGB4-213ENST00000584939 PCGF6Q9BYE7 350 aa24.46■■□□□ 1.51
ITGB4-213ENST00000584939 SEPT12Q8IYM1 358 aa24.45■■□□□ 1.5
ITGB4-213ENST00000584939 ONECUT3O60422 494 aaPredicted RBP24.43■■□□□ 1.5
ITGB4-213ENST00000584939 KIAA0232Q92628 1395 aa24.42■■□□□ 1.5
ITGB4-213ENST00000584939 COL14A1Q05707 1796 aaKnown RBP24.42■■□□□ 1.5
ITGB4-213ENST00000584939 CRYBG1Q9Y4K1 1723 aa24.42■■□□□ 1.5
ITGB4-213ENST00000584939 ZC3H6P61129 1189 aaKnown RBP24.42■■□□□ 1.5
ITGB4-213ENST00000584939 CARD11Q9BXL7 1154 aa24.42■■□□□ 1.5
ITGB4-213ENST00000584939 CHRNA2Q15822 529 aa24.41■■□□□ 1.5
ITGB4-213ENST00000584939 NLRP13Q86W25 1043 aa24.39■■□□□ 1.49
ITGB4-213ENST00000584939 BRD4O60885 1362 aaPredicted RBP24.39■■□□□ 1.49
ITGB4-213ENST00000584939 A0A0G2JS52 829 aa24.38■■□□□ 1.49
ITGB4-213ENST00000584939 MYT1Q01538 1121 aa24.38■■□□□ 1.49
ITGB4-213ENST00000584939 FAM98CQ17RN3 349 aaKnown RBP24.38■■□□□ 1.49
ITGB4-213ENST00000584939 CCDC125Q86Z20 511 aa24.38■■□□□ 1.49
ITGB4-213ENST00000584939 NRAPQ86VF7 1730 aa24.38■■□□□ 1.49
ITGB4-213ENST00000584939 USP19O94966 1318 aa24.37■■□□□ 1.49
ITGB4-213ENST00000584939 SPATA31A5Q5VU36 1347 aa24.36■■□□□ 1.49
ITGB4-213ENST00000584939 SPATA31A7Q8IWB4 1347 aa24.36■■□□□ 1.49
ITGB4-213ENST00000584939 USP6P35125 1406 aa24.36■■□□□ 1.49
ITGB4-213ENST00000584939 PHRF1Q9P1Y6 1649 aaKnown RBP24.35■■□□□ 1.49
ITGB4-213ENST00000584939 KRT27Q7Z3Y8 459 aa24.35■■□□□ 1.49
ITGB4-213ENST00000584939 GCP02774 474 aa24.34■■□□□ 1.49
ITGB4-213ENST00000584939 STRN4Q9NRL3 753 aa24.34■■□□□ 1.49
ITGB4-213ENST00000584939 NLRP6P59044 892 aa24.33■■□□□ 1.49
ITGB4-213ENST00000584939 ZNF692Q9BU19 519 aaPredicted RBP24.33■■□□□ 1.49
ITGB4-213ENST00000584939 EVA1CP58658 441 aa24.32■■□□□ 1.48
ITGB4-213ENST00000584939 CPDO75976 1380 aa24.31■■□□□ 1.48
ITGB4-213ENST00000584939 SBNO2Q9Y2G9 1366 aa24.31■■□□□ 1.48
ITGB4-213ENST00000584939 SSH2Q76I76 1423 aa24.31■■□□□ 1.48
ITGB4-213ENST00000584939 BRWD3Q6RI45 1802 aa24.31■■□□□ 1.48
ITGB4-213ENST00000584939 NRKQ7Z2Y5 1582 aa24.3■■□□□ 1.48
ITGB4-213ENST00000584939 SPATA31A1Q5TZJ5 1347 aa24.3■■□□□ 1.48
ITGB4-213ENST00000584939 BLMP54132 1417 aaPredicted RBP24.28■■□□□ 1.48
ITGB4-213ENST00000584939 TTC21BQ7Z4L5 1316 aa24.28■■□□□ 1.48
ITGB4-213ENST00000584939 ZBTB7CA1YPR0 619 aa24.26■■□□□ 1.47
ITGB4-213ENST00000584939 CPSF1Q10570 1443 aaKnown RBP24.26■■□□□ 1.47
ITGB4-213ENST00000584939 CAMTA1Q9Y6Y1 1673 aa24.25■■□□□ 1.47
ITGB4-213ENST00000584939 SF3B2Q13435 895 aaKnown RBP24.25■■□□□ 1.47
ITGB4-213ENST00000584939 LARP1Q6PKG0 1096 aaKnown RBP24.25■■□□□ 1.47
ITGB4-213ENST00000584939 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
ITGB4-213ENST00000584939 TTC21AQ8NDW8 1320 aa24.24■■□□□ 1.47
ITGB4-213ENST00000584939 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
ITGB4-213ENST00000584939 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
ITGB4-213ENST00000584939 SLIT3O75094 1523 aa24.22■■□□□ 1.47
ITGB4-213ENST00000584939 FAM182BQ5T319 152 aa24.21■■□□□ 1.47
ITGB4-213ENST00000584939 DEFB132Q7Z7B7 95 aa24.21■■□□□ 1.47
ITGB4-213ENST00000584939 PIK3C2AO00443 1686 aa24.21■■□□□ 1.47
ITGB4-213ENST00000584939 LMO7Q8WWI1 1683 aa24.21■■□□□ 1.47
ITGB4-213ENST00000584939 AATKQ6ZMQ8 1374 aa24.2■■□□□ 1.46
ITGB4-213ENST00000584939 ST20-MTHFSA0A0A6YYL1 179 aa24.2■■□□□ 1.46
ITGB4-213ENST00000584939 BARGINQ6ZT62 677 aa24.2■■□□□ 1.46
ITGB4-213ENST00000584939 SLC12A5Q9H2X9 1139 aa24.2■■□□□ 1.46
ITGB4-213ENST00000584939 ZRANB1Q9UGI0 708 aa24.2■■□□□ 1.46
ITGB4-213ENST00000584939 EP400Q96L91 3159 aa24.2■■□□□ 1.46
ITGB4-213ENST00000584939 THSD7AQ9UPZ6 1657 aa24.19■■□□□ 1.46
ITGB4-213ENST00000584939 TCP11L2Q8N4U5 519 aa24.19■■□□□ 1.46
ITGB4-213ENST00000584939 KCNH5Q8NCM2 988 aa24.19■■□□□ 1.46
ITGB4-213ENST00000584939 AKAP12Q02952 1782 aa24.19■■□□□ 1.46
ITGB4-213ENST00000584939 SOX12O15370 315 aa24.18■■□□□ 1.46
ITGB4-213ENST00000584939 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.18■■□□□ 1.46
ITGB4-213ENST00000584939 PUS7Q96PZ0 661 aaKnown RBP24.18■■□□□ 1.46
ITGB4-213ENST00000584939 TESK2Q96S53 571 aa24.18■■□□□ 1.46
ITGB4-213ENST00000584939 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
ITGB4-213ENST00000584939 COL5A2P05997 1499 aaPredicted RBP24.17■■□□□ 1.46
ITGB4-213ENST00000584939 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
ITGB4-213ENST00000584939 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
ITGB4-213ENST00000584939 THRAP3Q9Y2W1 955 aaKnown RBP24.16■■□□□ 1.46
ITGB4-213ENST00000584939 CD163L1Q9NR16 1453 aa24.15■■□□□ 1.46
ITGB4-213ENST00000584939 TERF2IPQ9NYB0 399 aa24.15■■□□□ 1.46
ITGB4-213ENST00000584939 SLC24A1O60721 1099 aa24.14■■□□□ 1.45
ITGB4-213ENST00000584939 AXIN2Q9Y2T1 843 aa24.14■■□□□ 1.45
ITGB4-213ENST00000584939 BAG6P46379 1132 aa24.13■■□□□ 1.45
ITGB4-213ENST00000584939 PDE3BQ13370 1112 aa24.13■■□□□ 1.45
ITGB4-213ENST00000584939 NME9Q86XW9 330 aa24.13■■□□□ 1.45
ITGB4-213ENST00000584939 CRB1P82279 1406 aa24.12■■□□□ 1.45
ITGB4-213ENST00000584939 FAM196AQ6ZSG2 479 aa24.12■■□□□ 1.45
ITGB4-213ENST00000584939 TOM1L2Q6ZVM7 507 aa24.11■■□□□ 1.45
ITGB4-213ENST00000584939 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
ITGB4-213ENST00000584939 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms