RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
CTC1-213ENST00000584842 CRYBG1Q9Y4K1 1723 aa11.26□□□□□ -0.61
CTC1-213ENST00000584842 PHRF1Q9P1Y6 1649 aaKnown RBP11.25□□□□□ -0.61
CTC1-213ENST00000584842 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
CTC1-213ENST00000584842 USP47Q96K76 1375 aa11.25□□□□□ -0.61
CTC1-213ENST00000584842 PLEKHG5O94827 1062 aa11.24□□□□□ -0.61
CTC1-213ENST00000584842 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
CTC1-213ENST00000584842 SOCS7O14512 581 aa11.23□□□□□ -0.61
CTC1-213ENST00000584842 POTEAQ6S8J7 498 aa11.23□□□□□ -0.61
CTC1-213ENST00000584842 USP21Q9UK80 565 aa11.23□□□□□ -0.61
CTC1-213ENST00000584842 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
CTC1-213ENST00000584842 RXRBP28702 533 aa11.22□□□□□ -0.61
CTC1-213ENST00000584842 USP6P35125 1406 aa11.22□□□□□ -0.61
CTC1-213ENST00000584842 CABP1Q9NZU7 370 aa11.22□□□□□ -0.61
CTC1-213ENST00000584842 NRKQ7Z2Y5 1582 aa11.21□□□□□ -0.61
CTC1-213ENST00000584842 CDK12Q9NYV4 1490 aaPredicted RBP11.21□□□□□ -0.61
CTC1-213ENST00000584842 NINLQ9Y2I6 1382 aa11.21□□□□□ -0.61
CTC1-213ENST00000584842 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.61
CTC1-213ENST00000584842 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
CTC1-213ENST00000584842 TRPC5Q9UL62 973 aaPredicted RBP11.21□□□□□ -0.61
CTC1-213ENST00000584842 FNBP4Q8N3X1 1017 aaPredicted RBP11.2□□□□□ -0.62
CTC1-213ENST00000584842 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
CTC1-213ENST00000584842 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
CTC1-213ENST00000584842 ZNF692Q9BU19 519 aaPredicted RBP11.2□□□□□ -0.62
CTC1-213ENST00000584842 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
CTC1-213ENST00000584842 SLIT2O94813 1529 aa11.19□□□□□ -0.62
CTC1-213ENST00000584842 ATRNO75882 1429 aa11.19□□□□□ -0.62
CTC1-213ENST00000584842 KTN1Q86UP2 1357 aaKnown RBP11.19□□□□□ -0.62
CTC1-213ENST00000584842 NRAPQ86VF7 1730 aa11.19□□□□□ -0.62
CTC1-213ENST00000584842 RBM6P78332 1123 aaKnown RBP11.19□□□□□ -0.62
CTC1-213ENST00000584842 TMF1P82094 1093 aa11.19□□□□□ -0.62
CTC1-213ENST00000584842 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
CTC1-213ENST00000584842 HDGFL2Q7Z4V5 671 aaPredicted RBP11.19□□□□□ -0.62
CTC1-213ENST00000584842 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
CTC1-213ENST00000584842 QTRT2Q9H974 415 aaKnown RBP11.19□□□□□ -0.62
CTC1-213ENST00000584842 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
CTC1-213ENST00000584842 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
CTC1-213ENST00000584842 TERF2IPQ9NYB0 399 aa11.18□□□□□ -0.62
CTC1-213ENST00000584842 BCL9LQ86UU0 1499 aa11.18□□□□□ -0.62
CTC1-213ENST00000584842 TTC21AQ8NDW8 1320 aa11.17□□□□□ -0.62
CTC1-213ENST00000584842 UNC5CLQ8IV45 518 aa11.17□□□□□ -0.62
CTC1-213ENST00000584842 TESK2Q96S53 571 aa11.17□□□□□ -0.62
CTC1-213ENST00000584842 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
CTC1-213ENST00000584842 CPSF1Q10570 1443 aaKnown RBP11.17□□□□□ -0.62
CTC1-213ENST00000584842 USP19O94966 1318 aa11.16□□□□□ -0.62
CTC1-213ENST00000584842 USP54Q70EL1 1684 aa11.16□□□□□ -0.62
CTC1-213ENST00000584842 EDC4Q6P2E9 1401 aaKnown RBP11.16□□□□□ -0.62
CTC1-213ENST00000584842 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
CTC1-213ENST00000584842 SLIT3O75094 1523 aa11.15□□□□□ -0.62
CTC1-213ENST00000584842 NLRP6P59044 892 aa11.15□□□□□ -0.62
CTC1-213ENST00000584842 CCDC9Q9Y3X0 531 aaKnown RBP11.15□□□□□ -0.62
CTC1-213ENST00000584842 RGS12O14924 1447 aa11.15□□□□□ -0.62
CTC1-213ENST00000584842 SSH2Q76I76 1423 aa11.15□□□□□ -0.62
CTC1-213ENST00000584842 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
CTC1-213ENST00000584842 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTC1-213ENST00000584842 BTG4Q9NY30 223 aa11.14□□□□□ -0.63
CTC1-213ENST00000584842 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
CTC1-213ENST00000584842 CPDO75976 1380 aa11.14□□□□□ -0.63
CTC1-213ENST00000584842 MYOM1P52179 1685 aa11.14□□□□□ -0.63
CTC1-213ENST00000584842 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 GLI3P10071 1580 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 FAM83GA6ND36 823 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
CTC1-213ENST00000584842 VPS72Q15906 364 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
CTC1-213ENST00000584842 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 KIF20BQ96Q89 1820 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
CTC1-213ENST00000584842 LMO7Q8WWI1 1683 aa11.12□□□□□ -0.63
CTC1-213ENST00000584842 GCP02774 474 aa11.12□□□□□ -0.63
CTC1-213ENST00000584842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTC1-213ENST00000584842 KCNH5Q8NCM2 988 aa11.12□□□□□ -0.63
CTC1-213ENST00000584842 LTN1O94822 1766 aa11.12□□□□□ -0.63
CTC1-213ENST00000584842 ABCC6O95255 1503 aa11.11□□□□□ -0.63
CTC1-213ENST00000584842 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
CTC1-213ENST00000584842 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
CTC1-213ENST00000584842 A0A0G2JS52 829 aa11.1□□□□□ -0.63
CTC1-213ENST00000584842 EVA1CP58658 441 aa11.1□□□□□ -0.63
CTC1-213ENST00000584842 MYT1Q01538 1121 aa11.1□□□□□ -0.63
CTC1-213ENST00000584842 CHRNA2Q15822 529 aa11.1□□□□□ -0.63
CTC1-213ENST00000584842 NFAT5O94916 1531 aa11.09□□□□□ -0.63
CTC1-213ENST00000584842 RGPD5Q99666 1765 aa11.09□□□□□ -0.63
CTC1-213ENST00000584842 USP31Q70CQ4 1352 aa11.09□□□□□ -0.63
CTC1-213ENST00000584842 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
CTC1-213ENST00000584842 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
CTC1-213ENST00000584842 SOX12O15370 315 aa11.08□□□□□ -0.64
CTC1-213ENST00000584842 HSPA5P11021 654 aaKnown RBP11.08□□□□□ -0.64
CTC1-213ENST00000584842 NME9Q86XW9 330 aa11.08□□□□□ -0.64
CTC1-213ENST00000584842 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
CTC1-213ENST00000584842 COL18A1P39060 1754 aa11.08□□□□□ -0.64
CTC1-213ENST00000584842 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
CTC1-213ENST00000584842 COL5A2P05997 1499 aaPredicted RBP11.07□□□□□ -0.64
CTC1-213ENST00000584842 OVOS2A0A0J9YW53 1432 aa11.07□□□□□ -0.64
CTC1-213ENST00000584842 OVOS2Q6IE36 1432 aa11.07□□□□□ -0.64
CTC1-213ENST00000584842 WNK3Q9BYP7 1800 aa11.07□□□□□ -0.64
CTC1-213ENST00000584842 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
CTC1-213ENST00000584842 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
CTC1-213ENST00000584842 THSD7AQ9UPZ6 1657 aa11.06□□□□□ -0.64
CTC1-213ENST00000584842 COG3Q96JB2 828 aa11.06□□□□□ -0.64
CTC1-213ENST00000584842 FAM208AQ9UK61 1670 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms