RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	LINC01559	Q495D7	138 aa		7.77	□□□□□ -1.17
PPP4R1-229	ENST00000584754	KCNH2	Q12809	1159 aa		7.76	□□□□□ -1.17
PPP4R1-229	ENST00000584754	DESI1	Q6ICB0	168 aa		7.76	□□□□□ -1.17
PPP4R1-229	ENST00000584754	BAP1	Q92560	729 aa		7.76	□□□□□ -1.17
PPP4R1-229	ENST00000584754	UNC93B1	Q9H1C4	597 aa		7.76	□□□□□ -1.17
PPP4R1-229	ENST00000584754	AAAS	Q9NRG9	546 aa		7.76	□□□□□ -1.17
PPP4R1-229	ENST00000584754	TREML4	Q6UXN2	200 aa		7.75	□□□□□ -1.17
PPP4R1-229	ENST00000584754	LRRN4	Q8WUT4	740 aa		7.75	□□□□□ -1.17
PPP4R1-229	ENST00000584754	AP1G2	O75843	785 aa		7.74	□□□□□ -1.17
PPP4R1-229	ENST00000584754	SH3BP2	P78314	561 aa		7.74	□□□□□ -1.17
PPP4R1-229	ENST00000584754	RC3H1	Q5TC82	1133 aa	Known RBP	7.74	□□□□□ -1.17
PPP4R1-229	ENST00000584754	MRGPRX2	Q96LB1	330 aa		7.74	□□□□□ -1.17
PPP4R1-229	ENST00000584754	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.73	□□□□□ -1.17
PPP4R1-229	ENST00000584754	F12	P00748	615 aa	Predicted RBP	7.72	□□□□□ -1.17
PPP4R1-229	ENST00000584754	CYP4X1	Q8N118	509 aa		7.72	□□□□□ -1.17
PPP4R1-229	ENST00000584754	HELB	Q8NG08	1087 aa	Predicted RBP	7.72	□□□□□ -1.17
PPP4R1-229	ENST00000584754	RFC5	P40937	340 aa		7.71	□□□□□ -1.18
PPP4R1-229	ENST00000584754	PPP2R2D	Q66LE6	453 aa		7.71	□□□□□ -1.18
PPP4R1-229	ENST00000584754	TTC24	A2A3L6	582 aa	Predicted RBP	7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	C11orf95	C9JLR9	678 aa	Predicted RBP	7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754		J3QL48	77 aa		7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	WNT7A	O00755	349 aa		7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	AXIN1	O15169	862 aa		7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	EPS8L1	Q8TE68	723 aa		7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	FOXJ1	Q92949	421 aa		7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	TOR4A	Q9NXH8	423 aa		7.7	□□□□□ -1.18
PPP4R1-229	ENST00000584754	NR6A1	Q15406	480 aa		7.69	□□□□□ -1.18
PPP4R1-229	ENST00000584754	ZNF511	Q8NB15	262 aa		7.69	□□□□□ -1.18
PPP4R1-229	ENST00000584754	GOPC	Q9HD26	462 aa		7.69	□□□□□ -1.18
PPP4R1-229	ENST00000584754	HMX1	Q9NP08	348 aa	Predicted RBP	7.69	□□□□□ -1.18
PPP4R1-229	ENST00000584754	DACH1	Q9UI36	760 aa		7.69	□□□□□ -1.18
PPP4R1-229	ENST00000584754	WNT7B	P56706	349 aa		7.68	□□□□□ -1.18
PPP4R1-229	ENST00000584754	EHBP1	Q8NDI1	1231 aa		7.68	□□□□□ -1.18
PPP4R1-229	ENST00000584754	GMPR2	Q9P2T1	348 aa	Known RBP	7.68	□□□□□ -1.18
PPP4R1-229	ENST00000584754	WFS1	O76024	890 aa		7.67	□□□□□ -1.18
PPP4R1-229	ENST00000584754	SIAH2	O43255	324 aa		7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	ALDH1A1	P00352	501 aa		7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	USP17L8	P0C7I0	530 aa		7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	SMPD1	P17405	629 aa		7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	C4orf48	Q5BLP8	95 aa		7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	CRIPAK	Q8N1N5	446 aa		7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	SNIP1	Q8TAD8	396 aa	Known RBP	7.66	□□□□□ -1.18
PPP4R1-229	ENST00000584754	AGER	Q15109	404 aa		7.65	□□□□□ -1.18
PPP4R1-229	ENST00000584754	TLL2	Q9Y6L7	1015 aa		7.65	□□□□□ -1.18
PPP4R1-229	ENST00000584754	CTC1	Q2NKJ3	1217 aa		7.64	□□□□□ -1.19
PPP4R1-229	ENST00000584754	AVP	P01185	164 aa		7.63	□□□□□ -1.19
PPP4R1-229	ENST00000584754	LCE2A	Q5TA79	106 aa	Predicted RBP	7.63	□□□□□ -1.19
PPP4R1-229	ENST00000584754	HPS1	Q92902	700 aa		7.63	□□□□□ -1.19
PPP4R1-229	ENST00000584754	MAGEB6P1	A0A0J9YX57	407 aa		7.62	□□□□□ -1.19
PPP4R1-229	ENST00000584754	ARID5B	Q14865	1188 aa		7.62	□□□□□ -1.19
PPP4R1-229	ENST00000584754	CARD14	Q9BXL6	1004 aa		7.62	□□□□□ -1.19
PPP4R1-229	ENST00000584754	SNRK	Q9NRH2	765 aa		7.62	□□□□□ -1.19
PPP4R1-229	ENST00000584754	TMEM259	Q4ZIN3	620 aa		7.61	□□□□□ -1.19
PPP4R1-229	ENST00000584754	TRIM34	Q9BYJ4	488 aa		7.61	□□□□□ -1.19
PPP4R1-229	ENST00000584754	VARS	P26640	1264 aa	Known RBP	7.6	□□□□□ -1.19
PPP4R1-229	ENST00000584754	STK17A	Q9UEE5	414 aa		7.6	□□□□□ -1.19
PPP4R1-229	ENST00000584754	FKBPL	Q9UIM3	349 aa		7.6	□□□□□ -1.19
PPP4R1-229	ENST00000584754	SMCP	P49901	116 aa	Predicted RBP	7.59	□□□□□ -1.19
PPP4R1-229	ENST00000584754	INSM1	Q01101	510 aa	Predicted RBP	7.59	□□□□□ -1.19
PPP4R1-229	ENST00000584754	SH3BP5L	Q7L8J4	393 aa		7.59	□□□□□ -1.19
PPP4R1-229	ENST00000584754	BPHL	Q86WA6	291 aa	Predicted RBP	7.58	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ARMC2	Q8NEN0	867 aa		7.58	□□□□□ -1.2
PPP4R1-229	ENST00000584754	OCSTAMP	Q9BR26	566 aa		7.58	□□□□□ -1.2
PPP4R1-229	ENST00000584754	WASF2	Q9Y6W5	498 aa		7.58	□□□□□ -1.2
PPP4R1-229	ENST00000584754	NFX1	Q12986	1120 aa	Known RBP	7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	NBPF14	Q5TI25	921 aa		7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ERICH6	Q7L0X2	663 aa		7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	SH3RF1	Q7Z6J0	888 aa		7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	FAM174A	Q8TBP5	190 aa		7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	GJD4	Q96KN9	370 aa	Predicted RBP	7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ATP13A2	Q9NQ11	1180 aa		7.57	□□□□□ -1.2
PPP4R1-229	ENST00000584754	SNRPB	P14678	240 aa	Known RBP	7.56	□□□□□ -1.2
PPP4R1-229	ENST00000584754	MTMR14	Q8NCE2	650 aa		7.56	□□□□□ -1.2
PPP4R1-229	ENST00000584754	GRM5	P41594	1212 aa		7.55	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ERFE	Q4G0M1	354 aa		7.55	□□□□□ -1.2
PPP4R1-229	ENST00000584754	PDXDC2P	Q6P474	469 aa		7.55	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ARHGAP9	Q9BRR9	750 aa		7.55	□□□□□ -1.2
PPP4R1-229	ENST00000584754	SENP2	Q9HC62	589 aa		7.55	□□□□□ -1.2
PPP4R1-229	ENST00000584754	NR3C2	P08235	984 aa		7.54	□□□□□ -1.2
PPP4R1-229	ENST00000584754	NNT	Q13423	1086 aa		7.54	□□□□□ -1.2
PPP4R1-229	ENST00000584754	TERT	O14746	1132 aa	Known RBP	7.53	□□□□□ -1.2
PPP4R1-229	ENST00000584754	WIPF1	O43516	503 aa		7.53	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ZBTB33	Q86T24	672 aa		7.53	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ADAM32	Q8TC27	787 aa		7.53	□□□□□ -1.2
PPP4R1-229	ENST00000584754	CDK15	Q96Q40	435 aa		7.53	□□□□□ -1.2
PPP4R1-229	ENST00000584754	C1QTNF2	Q9BXJ5	285 aa		7.53	□□□□□ -1.2
PPP4R1-229	ENST00000584754	ADH1C	P00326	375 aa		7.52	□□□□□ -1.21
PPP4R1-229	ENST00000584754	PTK2	Q05397	1052 aa		7.52	□□□□□ -1.21
PPP4R1-229	ENST00000584754	VASH1	Q7L8A9	365 aa	Predicted RBP	7.52	□□□□□ -1.21
PPP4R1-229	ENST00000584754	PNMA1	Q8ND90	353 aa		7.52	□□□□□ -1.21
PPP4R1-229	ENST00000584754	BANK1	Q8NDB2	785 aa		7.52	□□□□□ -1.21
PPP4R1-229	ENST00000584754	TRIM47	Q96LD4	638 aa		7.52	□□□□□ -1.21
PPP4R1-229	ENST00000584754	CAPN5	O15484	640 aa	Predicted RBP	7.51	□□□□□ -1.21
PPP4R1-229	ENST00000584754	BMP1	P13497	986 aa		7.51	□□□□□ -1.21
PPP4R1-229	ENST00000584754	FSHR	P23945	695 aa		7.51	□□□□□ -1.21
PPP4R1-229	ENST00000584754	TMEM132A	Q24JP5	1023 aa		7.51	□□□□□ -1.21
PPP4R1-229	ENST00000584754	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	7.51	□□□□□ -1.21
PPP4R1-229	ENST00000584754	ZFAND3	Q9H8U3	227 aa		7.51	□□□□□ -1.21
PPP4R1-229	ENST00000584754	GPR37L1	O60883	481 aa		7.5	□□□□□ -1.21
PPP4R1-229	ENST00000584754	WDR4	P57081	412 aa	Known RBP	7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms