RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
TRAPPC8-212ENST00000584604 CD2BP2O95400 341 aaKnown RBP12□□□□□ -0.49
TRAPPC8-212ENST00000584604 TRIM32Q13049 653 aa12□□□□□ -0.49
TRAPPC8-212ENST00000584604 GPR37L1O60883 481 aa11.99□□□□□ -0.49
TRAPPC8-212ENST00000584604 NBPF14Q5TI25 921 aa11.98□□□□□ -0.49
TRAPPC8-212ENST00000584604 PRKD2Q9BZL6 878 aa11.98□□□□□ -0.49
TRAPPC8-212ENST00000584604 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-212ENST00000584604 WNT7BP56706 349 aa11.97□□□□□ -0.49
TRAPPC8-212ENST00000584604 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
TRAPPC8-212ENST00000584604 BAP1Q92560 729 aa11.97□□□□□ -0.49
TRAPPC8-212ENST00000584604 COG6Q9Y2V7 657 aa11.97□□□□□ -0.49
TRAPPC8-212ENST00000584604 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
TRAPPC8-212ENST00000584604 TBC1D2BQ9UPU7 963 aa11.96□□□□□ -0.49
TRAPPC8-212ENST00000584604 ZNF511Q8NB15 262 aa11.95□□□□□ -0.5
TRAPPC8-212ENST00000584604 GPSM3Q9Y4H4 160 aa11.95□□□□□ -0.5
TRAPPC8-212ENST00000584604 SH3BP2P78314 561 aa11.94□□□□□ -0.5
TRAPPC8-212ENST00000584604 ZNF598Q86UK7 904 aaKnown RBP11.94□□□□□ -0.5
TRAPPC8-212ENST00000584604 GDPD2Q9HCC8 539 aa11.94□□□□□ -0.5
TRAPPC8-212ENST00000584604 RAD21O60216 631 aa11.93□□□□□ -0.5
TRAPPC8-212ENST00000584604 SKOR1P84550 965 aa11.93□□□□□ -0.5
TRAPPC8-212ENST00000584604 ERICH6Q7L0X2 663 aa11.93□□□□□ -0.5
TRAPPC8-212ENST00000584604 A6NJR5 290 aa11.92□□□□□ -0.5
TRAPPC8-212ENST00000584604 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
TRAPPC8-212ENST00000584604 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
TRAPPC8-212ENST00000584604 POM121Q96HA1 1249 aa11.92□□□□□ -0.5
TRAPPC8-212ENST00000584604 LINC01559Q495D7 138 aa11.91□□□□□ -0.5
TRAPPC8-212ENST00000584604 IRF5Q13568 498 aa11.9□□□□□ -0.5
TRAPPC8-212ENST00000584604 BPHLQ86WA6 291 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC8-212ENST00000584604 PTK2Q05397 1052 aa11.89□□□□□ -0.51
TRAPPC8-212ENST00000584604 ZNF697Q5TEC3 545 aa11.89□□□□□ -0.51
TRAPPC8-212ENST00000584604 WNT7AO00755 349 aa11.88□□□□□ -0.51
TRAPPC8-212ENST00000584604 FOXJ1Q92949 421 aa11.88□□□□□ -0.51
TRAPPC8-212ENST00000584604 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
TRAPPC8-212ENST00000584604 ZBBXA8MT70 800 aa11.87□□□□□ -0.51
TRAPPC8-212ENST00000584604 ABL2P42684 1182 aa11.87□□□□□ -0.51
TRAPPC8-212ENST00000584604 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
TRAPPC8-212ENST00000584604 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
TRAPPC8-212ENST00000584604 VARSP26640 1264 aaKnown RBP11.86□□□□□ -0.51
TRAPPC8-212ENST00000584604 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
TRAPPC8-212ENST00000584604 C4orf48Q5BLP8 95 aa11.86□□□□□ -0.51
TRAPPC8-212ENST00000584604 FNBP4Q8N3X1 1017 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC8-212ENST00000584604 C1QTNF2Q9BXJ5 285 aa11.86□□□□□ -0.51
TRAPPC8-212ENST00000584604 ZMYND15Q9H091 742 aa11.86□□□□□ -0.51
TRAPPC8-212ENST00000584604 NR1H3Q13133 447 aa11.85□□□□□ -0.51
TRAPPC8-212ENST00000584604 ARHGAP9Q9BRR9 750 aa11.85□□□□□ -0.51
TRAPPC8-212ENST00000584604 FBXO45P0C2W1 286 aa11.84□□□□□ -0.51
TRAPPC8-212ENST00000584604 WWC1Q8IX03 1113 aa11.84□□□□□ -0.51
TRAPPC8-212ENST00000584604 PKD2L1Q9P0L9 805 aa11.84□□□□□ -0.51
TRAPPC8-212ENST00000584604 GDF9O60383 454 aa11.83□□□□□ -0.52
TRAPPC8-212ENST00000584604 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
TRAPPC8-212ENST00000584604 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-212ENST00000584604 TRMT44Q8IYL2 757 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-212ENST00000584604 MPNDQ8N594 471 aa11.83□□□□□ -0.52
TRAPPC8-212ENST00000584604 SIAH2O43255 324 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 PRR20EP86478 221 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 PRR20CP86479 221 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 PRR20DP86480 221 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 PRR20BP86481 221 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 PRR20AP86496 221 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 AGERQ15109 404 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 EHBP1Q8NDI1 1231 aa11.82□□□□□ -0.52
TRAPPC8-212ENST00000584604 ZBTB33Q86T24 672 aa11.81□□□□□ -0.52
TRAPPC8-212ENST00000584604 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
TRAPPC8-212ENST00000584604 ADAM32Q8TC27 787 aa11.81□□□□□ -0.52
TRAPPC8-212ENST00000584604 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
TRAPPC8-212ENST00000584604 TRIM67Q6ZTA4 783 aa11.8□□□□□ -0.52
TRAPPC8-212ENST00000584604 MRGPRX2Q96LB1 330 aa11.8□□□□□ -0.52
TRAPPC8-212ENST00000584604 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
TRAPPC8-212ENST00000584604 MCCD1P59942 119 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-212ENST00000584604 ZNF592Q92610 1267 aa11.79□□□□□ -0.52
TRAPPC8-212ENST00000584604 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-212ENST00000584604 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
TRAPPC8-212ENST00000584604 TRAK2O60296 914 aa11.77□□□□□ -0.53
TRAPPC8-212ENST00000584604 FOXC1Q12948 553 aa11.77□□□□□ -0.53
TRAPPC8-212ENST00000584604 CDK15Q96Q40 435 aa11.77□□□□□ -0.53
TRAPPC8-212ENST00000584604 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-212ENST00000584604 MAP4K5Q9Y4K4 846 aa11.77□□□□□ -0.53
TRAPPC8-212ENST00000584604 SOX11P35716 441 aa11.76□□□□□ -0.53
TRAPPC8-212ENST00000584604 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
TRAPPC8-212ENST00000584604 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
TRAPPC8-212ENST00000584604 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRAPPC8-212ENST00000584604 SNIP1Q8TAD8 396 aaKnown RBP11.75□□□□□ -0.53
TRAPPC8-212ENST00000584604 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
TRAPPC8-212ENST00000584604 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
TRAPPC8-212ENST00000584604 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
TRAPPC8-212ENST00000584604 TNFRSF10AO00220 468 aa11.71□□□□□ -0.53
TRAPPC8-212ENST00000584604 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
TRAPPC8-212ENST00000584604 ALG2Q9H553 416 aa11.71□□□□□ -0.53
TRAPPC8-212ENST00000584604 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
TRAPPC8-212ENST00000584604 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
TRAPPC8-212ENST00000584604 POM121CA8CG34 1229 aa11.69□□□□□ -0.54
TRAPPC8-212ENST00000584604 GRM5P41594 1212 aa11.69□□□□□ -0.54
TRAPPC8-212ENST00000584604 NBPF20Q3BBV1 942 aa11.69□□□□□ -0.54
TRAPPC8-212ENST00000584604 TLL2Q9Y6L7 1015 aa11.69□□□□□ -0.54
TRAPPC8-212ENST00000584604 ESPNB1AK53 854 aa11.68□□□□□ -0.54
TRAPPC8-212ENST00000584604 ADH1CP00326 375 aa11.68□□□□□ -0.54
TRAPPC8-212ENST00000584604 VASH1Q7L8A9 365 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC8-212ENST00000584604 TTC24A2A3L6 582 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC8-212ENST00000584604 SEMA3FQ13275 785 aa11.67□□□□□ -0.54
TRAPPC8-212ENST00000584604 CEP126Q9P2H0 1117 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms