RNA–Protein interactions for RNA: ENST00000583704.1

TTC19-210, Transcript of tetratricopeptide repeat domain 19, human

TSL 2

Gene TTC19, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC19-210	ENST00000583704	COL14A1	Q05707	1796 aa	Known RBP	32.37	■■■□□ 2.77
TTC19-210	ENST00000583704	CDK19	Q9BWU1	502 aa		32.36	■■■□□ 2.77
TTC19-210	ENST00000583704	SEPT12	Q8IYM1	358 aa		32.34	■■■□□ 2.77
TTC19-210	ENST00000583704	BTG4	Q9NY30	223 aa		32.32	■■■□□ 2.76
TTC19-210	ENST00000583704	CCDC125	Q86Z20	511 aa		32.31	■■■□□ 2.76
TTC19-210	ENST00000583704	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.29	■■■□□ 2.76
TTC19-210	ENST00000583704	ONECUT3	O60422	494 aa	Predicted RBP	32.27	■■■□□ 2.76
TTC19-210	ENST00000583704	POLR3A	O14802	1390 aa	Predicted RBP	32.27	■■■□□ 2.76
TTC19-210	ENST00000583704	BLM	P54132	1417 aa	Predicted RBP	32.26	■■■□□ 2.75
TTC19-210	ENST00000583704	ACE	P12821	1306 aa		32.26	■■■□□ 2.75
TTC19-210	ENST00000583704	QRICH2	Q9H0J4	1663 aa		32.25	■■■□□ 2.75
TTC19-210	ENST00000583704	CCDC61	Q9Y6R9	512 aa		32.25	■■■□□ 2.75
TTC19-210	ENST00000583704	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.24	■■■□□ 2.75
TTC19-210	ENST00000583704	PRDM11	Q9NQV5	511 aa		32.23	■■■□□ 2.75
TTC19-210	ENST00000583704		A0A0G2JS52	829 aa		32.22	■■■□□ 2.75
TTC19-210	ENST00000583704	MYT1	Q01538	1121 aa		32.22	■■■□□ 2.75
TTC19-210	ENST00000583704	L3MBTL2	Q969R5	705 aa		32.22	■■■□□ 2.75
TTC19-210	ENST00000583704	FAM98C	Q17RN3	349 aa	Known RBP	32.21	■■■□□ 2.75
TTC19-210	ENST00000583704	NBPF8	Q3BBV2	869 aa		32.21	■■■□□ 2.75
TTC19-210	ENST00000583704	NUTM2G	Q5VZR2	741 aa		32.21	■■■□□ 2.75
TTC19-210	ENST00000583704	KRT27	Q7Z3Y8	459 aa		32.21	■■■□□ 2.75
TTC19-210	ENST00000583704	KIAA0232	Q92628	1395 aa		32.2	■■■□□ 2.75
TTC19-210	ENST00000583704	PLEKHG3	A1L390	1219 aa		32.2	■■■□□ 2.75
TTC19-210	ENST00000583704	SRPK2	P78362	688 aa	Known RBP	32.19	■■■□□ 2.74
TTC19-210	ENST00000583704	SIN3A	Q96ST3	1273 aa		32.19	■■■□□ 2.74
TTC19-210	ENST00000583704	TRPM1	Q7Z4N2	1603 aa		32.18	■■■□□ 2.74
TTC19-210	ENST00000583704	SRCAP	Q6ZRS2	3230 aa		32.18	■■■□□ 2.74
TTC19-210	ENST00000583704	ZRANB1	Q9UGI0	708 aa		32.18	■■■□□ 2.74
TTC19-210	ENST00000583704	PPIP5K1	Q6PFW1	1433 aa		32.17	■■■□□ 2.74
TTC19-210	ENST00000583704	SPATA31A5	Q5VU36	1347 aa		32.16	■■■□□ 2.74
TTC19-210	ENST00000583704	SPATA31A7	Q8IWB4	1347 aa		32.16	■■■□□ 2.74
TTC19-210	ENST00000583704	NRK	Q7Z2Y5	1582 aa		32.15	■■■□□ 2.74
TTC19-210	ENST00000583704	CHRNA2	Q15822	529 aa		32.15	■■■□□ 2.74
TTC19-210	ENST00000583704	CABP2	Q9NPB3	220 aa		32.15	■■■□□ 2.74
TTC19-210	ENST00000583704	ZC3H6	P61129	1189 aa	Known RBP	32.13	■■■□□ 2.73
TTC19-210	ENST00000583704	DEFB132	Q7Z7B7	95 aa		32.13	■■■□□ 2.73
TTC19-210	ENST00000583704	THSD7A	Q9UPZ6	1657 aa		32.13	■■■□□ 2.73
TTC19-210	ENST00000583704	SF3B2	Q13435	895 aa	Known RBP	32.12	■■■□□ 2.73
TTC19-210	ENST00000583704	NEUROD1	Q13562	356 aa		32.12	■■■□□ 2.73
TTC19-210	ENST00000583704	ABTB2	Q8N961	1025 aa		32.11	■■■□□ 2.73
TTC19-210	ENST00000583704	STRN4	Q9NRL3	753 aa		32.09	■■■□□ 2.73
TTC19-210	ENST00000583704	USP19	O94966	1318 aa		32.06	■■■□□ 2.72
TTC19-210	ENST00000583704	ROCK2	O75116	1388 aa	Known RBP	32.06	■■■□□ 2.72
TTC19-210	ENST00000583704	SPATA31A1	Q5TZJ5	1347 aa		32.05	■■■□□ 2.72
TTC19-210	ENST00000583704	FAM182B	Q5T319	152 aa		32.04	■■■□□ 2.72
TTC19-210	ENST00000583704	LMO7	Q8WWI1	1683 aa		32.04	■■■□□ 2.72
TTC19-210	ENST00000583704	CABP1	Q9NZU7	370 aa		32.03	■■■□□ 2.72
TTC19-210	ENST00000583704	CAMTA1	Q9Y6Y1	1673 aa		32.02	■■■□□ 2.72
TTC19-210	ENST00000583704	USP6	P35125	1406 aa		32.02	■■■□□ 2.72
TTC19-210	ENST00000583704	RGPD1	P0DJD0	1748 aa		32.02	■■■□□ 2.72
TTC19-210	ENST00000583704	CPD	O75976	1380 aa		32.02	■■■□□ 2.72
TTC19-210	ENST00000583704	SSH2	Q76I76	1423 aa		32.01	■■■□□ 2.72
TTC19-210	ENST00000583704	TRIM26	Q12899	539 aa	Predicted RBP	32.01	■■■□□ 2.71
TTC19-210	ENST00000583704	NLRP13	Q86W25	1043 aa		32.01	■■■□□ 2.71
TTC19-210	ENST00000583704	BRD4	O60885	1362 aa	Predicted RBP	32.01	■■■□□ 2.71
TTC19-210	ENST00000583704	EVC2	Q86UK5	1308 aa		32	■■■□□ 2.71
TTC19-210	ENST00000583704	USP35	Q9P2H5	1018 aa		31.99	■■■□□ 2.71
TTC19-210	ENST00000583704	EVA1C	P58658	441 aa		31.98	■■■□□ 2.71
TTC19-210	ENST00000583704	GC	P02774	474 aa		31.97	■■■□□ 2.71
TTC19-210	ENST00000583704	BAG6	P46379	1132 aa		31.97	■■■□□ 2.71
TTC19-210	ENST00000583704	TNS1	Q9HBL0	1735 aa	Known RBP	31.96	■■■□□ 2.71
TTC19-210	ENST00000583704	PIK3C2A	O00443	1686 aa		31.95	■■■□□ 2.71
TTC19-210	ENST00000583704	LARP1	Q6PKG0	1096 aa	Known RBP	31.94	■■■□□ 2.7
TTC19-210	ENST00000583704	SLIT3	O75094	1523 aa		31.93	■■■□□ 2.7
TTC19-210	ENST00000583704	AKAP12	Q02952	1782 aa		31.92	■■■□□ 2.7
TTC19-210	ENST00000583704	NLRP6	P59044	892 aa		31.92	■■■□□ 2.7
TTC19-210	ENST00000583704	COL5A2	P05997	1499 aa	Predicted RBP	31.91	■■■□□ 2.7
TTC19-210	ENST00000583704	BARGIN	Q6ZT62	677 aa		31.9	■■■□□ 2.7
TTC19-210	ENST00000583704	ZBTB7C	A1YPR0	619 aa		31.89	■■■□□ 2.7
TTC19-210	ENST00000583704	EN1	Q05925	392 aa	Predicted RBP	31.88	■■■□□ 2.69
TTC19-210	ENST00000583704	TCP11L2	Q8N4U5	519 aa		31.87	■■■□□ 2.69
TTC19-210	ENST00000583704	DISP2	A7MBM2	1401 aa		31.85	■■■□□ 2.69
TTC19-210	ENST00000583704	FAM196A	Q6ZSG2	479 aa		31.84	■■■□□ 2.69
TTC19-210	ENST00000583704	PARP4	Q9UKK3	1724 aa	Known RBP	31.83	■■■□□ 2.69
TTC19-210	ENST00000583704	AATK	Q6ZMQ8	1374 aa		31.82	■■■□□ 2.69
TTC19-210	ENST00000583704	TTC21B	Q7Z4L5	1316 aa		31.82	■■■□□ 2.68
TTC19-210	ENST00000583704	COL18A1	P39060	1754 aa		31.82	■■■□□ 2.68
TTC19-210	ENST00000583704	TRIM37	O94972	964 aa		31.82	■■■□□ 2.68
TTC19-210	ENST00000583704	PDE3B	Q13370	1112 aa		31.82	■■■□□ 2.68
TTC19-210	ENST00000583704	CRB1	P82279	1406 aa		31.82	■■■□□ 2.68
TTC19-210	ENST00000583704	PSD	A5PKW4	1024 aa	Predicted RBP	31.81	■■■□□ 2.68
TTC19-210	ENST00000583704	ZNF692	Q9BU19	519 aa	Predicted RBP	31.81	■■■□□ 2.68
TTC19-210	ENST00000583704	CARD11	Q9BXL7	1154 aa		31.81	■■■□□ 2.68
TTC19-210	ENST00000583704	THRAP3	Q9Y2W1	955 aa	Known RBP	31.81	■■■□□ 2.68
TTC19-210	ENST00000583704	CPSF1	Q10570	1443 aa	Known RBP	31.81	■■■□□ 2.68
TTC19-210	ENST00000583704	SBNO2	Q9Y2G9	1366 aa		31.81	■■■□□ 2.68
TTC19-210	ENST00000583704	MON2	Q7Z3U7	1717 aa		31.8	■■■□□ 2.68
TTC19-210	ENST00000583704	TONSL	Q96HA7	1378 aa		31.8	■■■□□ 2.68
TTC19-210	ENST00000583704	KTN1	Q86UP2	1357 aa	Known RBP	31.78	■■■□□ 2.68
TTC19-210	ENST00000583704	LRP5	O75197	1615 aa		31.78	■■■□□ 2.68
TTC19-210	ENST00000583704	TTC21A	Q8NDW8	1320 aa		31.77	■■■□□ 2.68
TTC19-210	ENST00000583704	EZH2	Q15910	746 aa	Known RBP	31.77	■■■□□ 2.68
TTC19-210	ENST00000583704	RGPD5	Q99666	1765 aa		31.75	■■■□□ 2.67
TTC19-210	ENST00000583704	SOX12	O15370	315 aa		31.74	■■■□□ 2.67
TTC19-210	ENST00000583704	LRRC37A3	O60309	1634 aa		31.74	■■■□□ 2.67
TTC19-210	ENST00000583704	WNK3	Q9BYP7	1800 aa		31.73	■■■□□ 2.67
TTC19-210	ENST00000583704	AXIN2	Q9Y2T1	843 aa		31.73	■■■□□ 2.67
TTC19-210	ENST00000583704	NFAT5	O94916	1531 aa		31.72	■■■□□ 2.67
TTC19-210	ENST00000583704	APBA3	O96018	575 aa		31.72	■■■□□ 2.67
TTC19-210	ENST00000583704	TOM1L2	Q6ZVM7	507 aa		31.72	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms