RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 MYT1Q01538 1121 aa12.64□□□□□ -0.39
CDK5RAP3-229ENST00000583697 VPS72Q15906 364 aa12.64□□□□□ -0.39
CDK5RAP3-229ENST00000583697 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
CDK5RAP3-229ENST00000583697 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-229ENST00000583697 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
CDK5RAP3-229ENST00000583697 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
CDK5RAP3-229ENST00000583697 SF3B2Q13435 895 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-229ENST00000583697 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
CDK5RAP3-229ENST00000583697 TRPM1Q7Z4N2 1603 aa12.61□□□□□ -0.39
CDK5RAP3-229ENST00000583697 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
CDK5RAP3-229ENST00000583697 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CDK5RAP3-229ENST00000583697 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-229ENST00000583697 ZRANB1Q9UGI0 708 aa12.6□□□□□ -0.39
CDK5RAP3-229ENST00000583697 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
CDK5RAP3-229ENST00000583697 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
CDK5RAP3-229ENST00000583697 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-229ENST00000583697 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
CDK5RAP3-229ENST00000583697 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
CDK5RAP3-229ENST00000583697 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
CDK5RAP3-229ENST00000583697 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-229ENST00000583697 CENPJQ9HC77 1338 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-229ENST00000583697 TNS1Q9HBL0 1735 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-229ENST00000583697 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
CDK5RAP3-229ENST00000583697 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-229ENST00000583697 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
CDK5RAP3-229ENST00000583697 ACEP12821 1306 aa12.56□□□□□ -0.4
CDK5RAP3-229ENST00000583697 LMO7Q8WWI1 1683 aa12.55□□□□□ -0.4
CDK5RAP3-229ENST00000583697 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-229ENST00000583697 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
CDK5RAP3-229ENST00000583697 SPATA31A5Q5VU36 1347 aa12.54□□□□□ -0.4
CDK5RAP3-229ENST00000583697 SPATA31A7Q8IWB4 1347 aa12.54□□□□□ -0.4
CDK5RAP3-229ENST00000583697 DEFB132Q7Z7B7 95 aa12.53□□□□□ -0.4
CDK5RAP3-229ENST00000583697 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
CDK5RAP3-229ENST00000583697 PIK3C2AO00443 1686 aa12.52□□□□□ -0.4
CDK5RAP3-229ENST00000583697 BAG6P46379 1132 aa12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 BRD4O60885 1362 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
CDK5RAP3-229ENST00000583697 LRP5O75197 1615 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 AKAP12Q02952 1782 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 SPATA31A1Q5TZJ5 1347 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 USP6P35125 1406 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 SLIT3O75094 1523 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 WNK3Q9BYP7 1800 aa12.51□□□□□ -0.41
CDK5RAP3-229ENST00000583697 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
CDK5RAP3-229ENST00000583697 USP19O94966 1318 aa12.5□□□□□ -0.41
CDK5RAP3-229ENST00000583697 CPDO75976 1380 aa12.5□□□□□ -0.41
CDK5RAP3-229ENST00000583697 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
CDK5RAP3-229ENST00000583697 PARP4Q9UKK3 1724 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-229ENST00000583697 EVC2Q86UK5 1308 aa12.49□□□□□ -0.41
CDK5RAP3-229ENST00000583697 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
CDK5RAP3-229ENST00000583697 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
CDK5RAP3-229ENST00000583697 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-229ENST00000583697 EVA1CP58658 441 aa12.48□□□□□ -0.41
CDK5RAP3-229ENST00000583697 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
CDK5RAP3-229ENST00000583697 MON2Q7Z3U7 1717 aa12.48□□□□□ -0.41
CDK5RAP3-229ENST00000583697 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
CDK5RAP3-229ENST00000583697 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
CDK5RAP3-229ENST00000583697 NEUROD1Q13562 356 aa12.47□□□□□ -0.41
CDK5RAP3-229ENST00000583697 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
CDK5RAP3-229ENST00000583697 RREB1Q92766 1687 aa12.47□□□□□ -0.41
CDK5RAP3-229ENST00000583697 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
CDK5RAP3-229ENST00000583697 SIN3AQ96ST3 1273 aa12.46□□□□□ -0.41
CDK5RAP3-229ENST00000583697 CRB1P82279 1406 aa12.45□□□□□ -0.42
CDK5RAP3-229ENST00000583697 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
CDK5RAP3-229ENST00000583697 GCP02774 474 aa12.44□□□□□ -0.42
CDK5RAP3-229ENST00000583697 NLRP6P59044 892 aa12.44□□□□□ -0.42
CDK5RAP3-229ENST00000583697 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
CDK5RAP3-229ENST00000583697 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
CDK5RAP3-229ENST00000583697 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
CDK5RAP3-229ENST00000583697 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-229ENST00000583697 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 COL18A1P39060 1754 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 TONSLQ96HA7 1378 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
CDK5RAP3-229ENST00000583697 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 PSDA5PKW4 1024 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 RGPD3A6NKT7 1758 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 RGPD4Q7Z3J3 1758 aa12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 AATKQ6ZMQ8 1374 aa12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 ABCC6O95255 1503 aa12.42□□□□□ -0.42
CDK5RAP3-229ENST00000583697 OVOS2A0A0G2JMS6 1433 aa12.41□□□□□ -0.42
CDK5RAP3-229ENST00000583697 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
CDK5RAP3-229ENST00000583697 TRIM37O94972 964 aa12.41□□□□□ -0.42
CDK5RAP3-229ENST00000583697 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
CDK5RAP3-229ENST00000583697 LTN1O94822 1766 aa12.41□□□□□ -0.42
CDK5RAP3-229ENST00000583697 TTC21AQ8NDW8 1320 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms