RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 FHDC1Q9C0D6 1143 aaPredicted RBP9.78□□□□□ -0.84
NUP85-221ENST00000583548 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
NUP85-221ENST00000583548 MYOM1P52179 1685 aa9.77□□□□□ -0.85
NUP85-221ENST00000583548 ABCC11Q96J66 1382 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 RGPD3A6NKT7 1758 aaPredicted RBP9.76□□□□□ -0.85
NUP85-221ENST00000583548 RGPD4Q7Z3J3 1758 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 CASZ1Q86V15 1759 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 PLSCR1O15162 318 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 PTGER2P43116 358 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 BARGINQ6ZT62 677 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 WAPLQ7Z5K2 1190 aa9.76□□□□□ -0.85
NUP85-221ENST00000583548 ZBTB7AO95365 584 aa9.75□□□□□ -0.85
NUP85-221ENST00000583548 GPRASP1Q5JY77 1395 aa9.75□□□□□ -0.85
NUP85-221ENST00000583548 MAP3K5Q99683 1374 aa9.75□□□□□ -0.85
NUP85-221ENST00000583548 GPR162Q16538 588 aa9.74□□□□□ -0.85
NUP85-221ENST00000583548 MTFR1LQ9H019 292 aa9.74□□□□□ -0.85
NUP85-221ENST00000583548 STK26Q9P289 416 aa9.74□□□□□ -0.85
NUP85-221ENST00000583548 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
NUP85-221ENST00000583548 SIRT1Q96EB6 747 aa9.73□□□□□ -0.85
NUP85-221ENST00000583548 BCL11BQ9C0K0 894 aaPredicted RBP9.73□□□□□ -0.85
NUP85-221ENST00000583548 ATF5Q9Y2D1 282 aaPredicted RBP9.73□□□□□ -0.85
NUP85-221ENST00000583548 ANKARQ7Z5J8 1434 aa9.73□□□□□ -0.85
NUP85-221ENST00000583548 HSPA6P17066 643 aa9.72□□□□□ -0.85
NUP85-221ENST00000583548 ANO8Q9HCE9 1232 aaPredicted RBP9.72□□□□□ -0.85
NUP85-221ENST00000583548 STRN4Q9NRL3 753 aa9.72□□□□□ -0.85
NUP85-221ENST00000583548 STK32BQ9NY57 414 aa9.72□□□□□ -0.85
NUP85-221ENST00000583548 THRAP3Q9Y2W1 955 aaKnown RBP9.72□□□□□ -0.85
NUP85-221ENST00000583548 IFT172Q9UG01 1749 aa9.71□□□□□ -0.85
NUP85-221ENST00000583548 PPLO60437 1756 aa9.71□□□□□ -0.85
NUP85-221ENST00000583548 EVA1CP58658 441 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 ARXQ96QS3 562 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 USP35Q9P2H5 1018 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 PLEKHH1Q9ULM0 1364 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 OVOS2A0A0G2JMS6 1433 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 ALS2Q96Q42 1657 aa9.71□□□□□ -0.86
NUP85-221ENST00000583548 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
NUP85-221ENST00000583548 EIF3AQ14152 1382 aaKnown RBP9.69□□□□□ -0.86
NUP85-221ENST00000583548 SSH2Q76I76 1423 aa9.69□□□□□ -0.86
NUP85-221ENST00000583548 PMFBP1Q8TBY8 1022 aa9.69□□□□□ -0.86
NUP85-221ENST00000583548 KIAA0232Q92628 1395 aa9.69□□□□□ -0.86
NUP85-221ENST00000583548 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
NUP85-221ENST00000583548 PDGFDQ9GZP0 370 aaPredicted RBP9.69□□□□□ -0.86
NUP85-221ENST00000583548 YTHDC2Q9H6S0 1430 aaKnown RBP9.69□□□□□ -0.86
NUP85-221ENST00000583548 RGPD8O14715 1765 aaPredicted RBP9.68□□□□□ -0.86
NUP85-221ENST00000583548 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
NUP85-221ENST00000583548 ANKRD30BQ9BXX2 1392 aa9.68□□□□□ -0.86
NUP85-221ENST00000583548 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
NUP85-221ENST00000583548 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
NUP85-221ENST00000583548 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
NUP85-221ENST00000583548 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
NUP85-221ENST00000583548 GRIN3BO60391 1043 aa9.67□□□□□ -0.86
NUP85-221ENST00000583548 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
NUP85-221ENST00000583548 PARP4Q9UKK3 1724 aaKnown RBP9.66□□□□□ -0.86
NUP85-221ENST00000583548 MSH5O43196 834 aa9.66□□□□□ -0.86
NUP85-221ENST00000583548 PAK3O75914 559 aaPredicted RBP9.66□□□□□ -0.86
NUP85-221ENST00000583548 CHRNA2Q15822 529 aa9.66□□□□□ -0.86
NUP85-221ENST00000583548 GPBP1L1Q9HC44 474 aaPredicted RBP9.66□□□□□ -0.86
NUP85-221ENST00000583548 ADGRF5Q8IZF2 1346 aa9.65□□□□□ -0.86
NUP85-221ENST00000583548 TMEM132EQ6IEE7 984 aa9.65□□□□□ -0.86
NUP85-221ENST00000583548 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
NUP85-221ENST00000583548 ZC3H6P61129 1189 aaKnown RBP9.64□□□□□ -0.87
NUP85-221ENST00000583548 TXNRD1Q16881 649 aa9.64□□□□□ -0.87
NUP85-221ENST00000583548 LARP1Q6PKG0 1096 aaKnown RBP9.64□□□□□ -0.87
NUP85-221ENST00000583548 NGDNQ8NEJ9 315 aaKnown RBP9.64□□□□□ -0.87
NUP85-221ENST00000583548 PEAK1Q9H792 1746 aa9.64□□□□□ -0.87
NUP85-221ENST00000583548 ATP7BP35670 1465 aa9.64□□□□□ -0.87
NUP85-221ENST00000583548 BCL9O00512 1426 aa9.64□□□□□ -0.87
NUP85-221ENST00000583548 AATKQ6ZMQ8 1374 aa9.63□□□□□ -0.87
NUP85-221ENST00000583548 POLD1P28340 1107 aa9.63□□□□□ -0.87
NUP85-221ENST00000583548 DDB1Q16531 1140 aa9.63□□□□□ -0.87
NUP85-221ENST00000583548 PROM2Q8N271 834 aa9.63□□□□□ -0.87
NUP85-221ENST00000583548 PIK3C2GO75747 1445 aa9.63□□□□□ -0.87
NUP85-221ENST00000583548 ATP10DQ9P241 1426 aa9.63□□□□□ -0.87
NUP85-221ENST00000583548 APLP1P51693 650 aa9.62□□□□□ -0.87
NUP85-221ENST00000583548 SLC16A10Q8TF71 515 aa9.62□□□□□ -0.87
NUP85-221ENST00000583548 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
NUP85-221ENST00000583548 POGKQ9P215 609 aa9.62□□□□□ -0.87
NUP85-221ENST00000583548 PHRF1Q9P1Y6 1649 aaKnown RBP9.62□□□□□ -0.87
NUP85-221ENST00000583548 CPDO75976 1380 aa9.62□□□□□ -0.87
NUP85-221ENST00000583548 UTRNP46939 3433 aa9.62□□□□□ -0.87
NUP85-221ENST00000583548 PRELPP51888 382 aa9.61□□□□□ -0.87
NUP85-221ENST00000583548 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
NUP85-221ENST00000583548 CRB1P82279 1406 aa9.61□□□□□ -0.87
NUP85-221ENST00000583548 SBF2Q86WG5 1849 aa9.61□□□□□ -0.87
NUP85-221ENST00000583548 SLC34A2O95436 690 aa9.6□□□□□ -0.87
NUP85-221ENST00000583548 SAFB2Q14151 953 aaKnown RBP eCLIP9.6□□□□□ -0.87
NUP85-221ENST00000583548 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
NUP85-221ENST00000583548 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
NUP85-221ENST00000583548 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
NUP85-221ENST00000583548 CAPN15O75808 1086 aa9.59□□□□□ -0.87
NUP85-221ENST00000583548 ITGAEP38570 1179 aa9.59□□□□□ -0.87
NUP85-221ENST00000583548 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
NUP85-221ENST00000583548 LRRC37A3O60309 1634 aa9.59□□□□□ -0.87
NUP85-221ENST00000583548 RGL3Q3MIN7 710 aa9.58□□□□□ -0.88
NUP85-221ENST00000583548 TNS4Q8IZW8 715 aa9.58□□□□□ -0.88
NUP85-221ENST00000583548 PCDH10Q9P2E7 1040 aa9.58□□□□□ -0.88
NUP85-221ENST00000583548 COL5A2P05997 1499 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms