RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-227ENST00000583352 NRAPQ86VF7 1730 aa14.15□□□□□ -0.14
CDK5RAP3-227ENST00000583352 COL14A1Q05707 1796 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-227ENST00000583352 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
CDK5RAP3-227ENST00000583352 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-227ENST00000583352 FAM98CQ17RN3 349 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-227ENST00000583352 ITSN1Q15811 1721 aa14.12□□□□□ -0.15
CDK5RAP3-227ENST00000583352 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-227ENST00000583352 PRDM11Q9NQV5 511 aa14.11□□□□□ -0.15
CDK5RAP3-227ENST00000583352 BAG6P46379 1132 aa14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 NUDT16Q96DE0 195 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 ATP7BP35670 1465 aa14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 CRYBG1Q9Y4K1 1723 aa14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
CDK5RAP3-227ENST00000583352 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
CDK5RAP3-227ENST00000583352 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
CDK5RAP3-227ENST00000583352 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
CDK5RAP3-227ENST00000583352 KIAA0232Q92628 1395 aa14.06□□□□□ -0.16
CDK5RAP3-227ENST00000583352 THSD7AQ9UPZ6 1657 aa14.05□□□□□ -0.16
CDK5RAP3-227ENST00000583352 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
CDK5RAP3-227ENST00000583352 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-227ENST00000583352 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 CHRNA2Q15822 529 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 STRN4Q9NRL3 753 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 ACEP12821 1306 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 LRP5O75197 1615 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 PSDA5PKW4 1024 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 ZC3H6P61129 1189 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 EN1Q05925 392 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 NBPF8Q3BBV2 869 aa14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 SPATA31A1Q5TZJ5 1347 aa14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.17
CDK5RAP3-227ENST00000583352 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
CDK5RAP3-227ENST00000583352 EVA1CP58658 441 aa14.01□□□□□ -0.17
CDK5RAP3-227ENST00000583352 ABTB2Q8N961 1025 aa14.01□□□□□ -0.17
CDK5RAP3-227ENST00000583352 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 FAM196AQ6ZSG2 479 aa14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 SSH2Q76I76 1423 aa13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 TNS1Q9HBL0 1735 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CPDO75976 1380 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 EP400Q96L91 3159 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 USP19O94966 1318 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 NLRP13Q86W25 1043 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 PPIP5K1Q6PFW1 1433 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 TRIM37O94972 964 aa13.97□□□□□ -0.17
CDK5RAP3-227ENST00000583352 PDE3BQ13370 1112 aa13.97□□□□□ -0.17
CDK5RAP3-227ENST00000583352 EZH2Q15910 746 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-227ENST00000583352 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CAMTA1Q9Y6Y1 1673 aa13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 TCP11L2Q8N4U5 519 aa13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 APBA3O96018 575 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 GCP02774 474 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 PARD3Q8TEW0 1356 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-227ENST00000583352 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
CDK5RAP3-227ENST00000583352 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 NLRP6P59044 892 aa13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CABP1Q9NZU7 370 aa13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 COL5A2P05997 1499 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 USP6P35125 1406 aa13.91□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CRB1P82279 1406 aa13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 L3MBTL2Q969R5 705 aa13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 SLIT3O75094 1523 aa13.9□□□□□ -0.19
CDK5RAP3-227ENST00000583352 EVC2Q86UK5 1308 aa13.9□□□□□ -0.19
CDK5RAP3-227ENST00000583352 RREB1Q92766 1687 aa13.89□□□□□ -0.19
CDK5RAP3-227ENST00000583352 AATKQ6ZMQ8 1374 aa13.89□□□□□ -0.19
CDK5RAP3-227ENST00000583352 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
CDK5RAP3-227ENST00000583352 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
CDK5RAP3-227ENST00000583352 PIK3C2AO00443 1686 aa13.86□□□□□ -0.19
CDK5RAP3-227ENST00000583352 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-227ENST00000583352 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-227ENST00000583352 DDB1Q16531 1140 aa13.85□□□□□ -0.19
CDK5RAP3-227ENST00000583352 COL18A1P39060 1754 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 KCNH5Q8NCM2 988 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms