RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 RPIAP49247 311 aa11.13□□□□□ -0.63
SMARCE1-219ENST00000583294 FOXC1Q12948 553 aa11.13□□□□□ -0.63
SMARCE1-219ENST00000583294 GDPD2Q9HCC8 539 aa11.12□□□□□ -0.63
SMARCE1-219ENST00000583294 PKD2L1Q9P0L9 805 aa11.12□□□□□ -0.63
SMARCE1-219ENST00000583294 A6NJR5 290 aa11.11□□□□□ -0.63
SMARCE1-219ENST00000583294 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-219ENST00000583294 MMP16P51512 607 aa11.1□□□□□ -0.63
SMARCE1-219ENST00000583294 PKDCCQ504Y2 493 aa11.1□□□□□ -0.63
SMARCE1-219ENST00000583294 TBC1D2BQ9UPU7 963 aa11.1□□□□□ -0.63
SMARCE1-219ENST00000583294 APBB1O00213 710 aa11.09□□□□□ -0.63
SMARCE1-219ENST00000583294 ABL2P42684 1182 aa11.09□□□□□ -0.63
SMARCE1-219ENST00000583294 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
SMARCE1-219ENST00000583294 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-219ENST00000583294 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
SMARCE1-219ENST00000583294 GJD4Q96KN9 370 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-219ENST00000583294 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
SMARCE1-219ENST00000583294 ZBTB24O43167 697 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-219ENST00000583294 DGAT1O75907 488 aa11.08□□□□□ -0.64
SMARCE1-219ENST00000583294 LYPD8Q6UX82 237 aa11.08□□□□□ -0.64
SMARCE1-219ENST00000583294 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
SMARCE1-219ENST00000583294 PRM3Q9NNZ6 103 aa11.08□□□□□ -0.64
SMARCE1-219ENST00000583294 TRAK2O60296 914 aa11.07□□□□□ -0.64
SMARCE1-219ENST00000583294 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-219ENST00000583294 JUNDP17535 347 aa11.07□□□□□ -0.64
SMARCE1-219ENST00000583294 MYT1Q01538 1121 aa11.07□□□□□ -0.64
SMARCE1-219ENST00000583294 NR6A1Q15406 480 aa11.07□□□□□ -0.64
SMARCE1-219ENST00000583294 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
SMARCE1-219ENST00000583294 SOCS7O14512 581 aa11.06□□□□□ -0.64
SMARCE1-219ENST00000583294 NDUFB9Q9Y6M9 179 aa11.06□□□□□ -0.64
SMARCE1-219ENST00000583294 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
SMARCE1-219ENST00000583294 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
SMARCE1-219ENST00000583294 FNBP4Q8N3X1 1017 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-219ENST00000583294 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-219ENST00000583294 CTHP32929 405 aa11.02□□□□□ -0.65
SMARCE1-219ENST00000583294 PTPRNQ16849 979 aa11.02□□□□□ -0.65
SMARCE1-219ENST00000583294 MAP10Q9P2G4 905 aa11.02□□□□□ -0.65
SMARCE1-219ENST00000583294 TRIM32Q13049 653 aa11.01□□□□□ -0.65
SMARCE1-219ENST00000583294 TOR4AQ9NXH8 423 aa11.01□□□□□ -0.65
SMARCE1-219ENST00000583294 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-219ENST00000583294 CYP4X1Q8N118 509 aa11□□□□□ -0.65
SMARCE1-219ENST00000583294 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
SMARCE1-219ENST00000583294 CCNYL3P0C7X3 344 aa10.99□□□□□ -0.65
SMARCE1-219ENST00000583294 WWC1Q8IX03 1113 aa10.99□□□□□ -0.65
SMARCE1-219ENST00000583294 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
SMARCE1-219ENST00000583294 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
SMARCE1-219ENST00000583294 GPR37L1O60883 481 aa10.98□□□□□ -0.65
SMARCE1-219ENST00000583294 F12P00748 615 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-219ENST00000583294 IRF5Q13568 498 aa10.98□□□□□ -0.65
SMARCE1-219ENST00000583294 POTECB2RU33 542 aa10.96□□□□□ -0.65
SMARCE1-219ENST00000583294 PTCRAQ6ISU1 281 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-219ENST00000583294 ARID3AQ99856 593 aa10.96□□□□□ -0.65
SMARCE1-219ENST00000583294 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
SMARCE1-219ENST00000583294 EVA1BQ9NVM1 165 aa10.96□□□□□ -0.65
SMARCE1-219ENST00000583294 TTC24A2A3L6 582 aaPredicted RBP10.95□□□□□ -0.66
SMARCE1-219ENST00000583294 WNT7AO00755 349 aa10.95□□□□□ -0.66
SMARCE1-219ENST00000583294 KCNH2Q12809 1159 aa10.95□□□□□ -0.66
SMARCE1-219ENST00000583294 MRGPRX2Q96LB1 330 aa10.95□□□□□ -0.66
SMARCE1-219ENST00000583294 POM121CA8CG34 1229 aa10.94□□□□□ -0.66
SMARCE1-219ENST00000583294 SKOR1P84550 965 aa10.94□□□□□ -0.66
SMARCE1-219ENST00000583294 PNMA1Q8ND90 353 aa10.94□□□□□ -0.66
SMARCE1-219ENST00000583294 VAC14Q08AM6 782 aa10.93□□□□□ -0.66
SMARCE1-219ENST00000583294 FKBPLQ9UIM3 349 aa10.93□□□□□ -0.66
SMARCE1-219ENST00000583294 DACH1Q9UI36 760 aa10.92□□□□□ -0.66
SMARCE1-219ENST00000583294 RC3H1Q5TC82 1133 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-219ENST00000583294 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
SMARCE1-219ENST00000583294 J3QL48 77 aa10.9□□□□□ -0.66
SMARCE1-219ENST00000583294 AVPP01185 164 aa10.9□□□□□ -0.66
SMARCE1-219ENST00000583294 WASHC4Q2M389 1173 aa10.9□□□□□ -0.66
SMARCE1-219ENST00000583294 SMPD1P17405 629 aa10.89□□□□□ -0.67
SMARCE1-219ENST00000583294 UNC93B1Q9H1C4 597 aa10.89□□□□□ -0.67
SMARCE1-219ENST00000583294 WNT7BP56706 349 aa10.88□□□□□ -0.67
SMARCE1-219ENST00000583294 CCDC82Q8N4S0 544 aa10.88□□□□□ -0.67
SMARCE1-219ENST00000583294 AXIN1O15169 862 aa10.87□□□□□ -0.67
SMARCE1-219ENST00000583294 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
SMARCE1-219ENST00000583294 ARMC2Q8NEN0 867 aa10.87□□□□□ -0.67
SMARCE1-219ENST00000583294 ZNF775Q96BV0 537 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-219ENST00000583294 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-219ENST00000583294 FBXO45P0C2W1 286 aa10.86□□□□□ -0.67
SMARCE1-219ENST00000583294 HDGFL1Q5TGJ6 251 aa10.86□□□□□ -0.67
SMARCE1-219ENST00000583294 GLMNQ92990 594 aa10.86□□□□□ -0.67
SMARCE1-219ENST00000583294 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-219ENST00000583294 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
SMARCE1-219ENST00000583294 NR1H3Q13133 447 aa10.84□□□□□ -0.67
SMARCE1-219ENST00000583294 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
SMARCE1-219ENST00000583294 SMCPP49901 116 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 SH3BP2P78314 561 aa10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 CTC1Q2NKJ3 1217 aa10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 ADAMTS19Q8TE59 1207 aa10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 BAP1Q92560 729 aa10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 HPS1Q92902 700 aa10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 CCDC97Q96F63 343 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-219ENST00000583294 PDXDC2PQ6P474 469 aa10.82□□□□□ -0.68
SMARCE1-219ENST00000583294 SIAH2O43255 324 aa10.81□□□□□ -0.68
SMARCE1-219ENST00000583294 PTK2Q05397 1052 aa10.81□□□□□ -0.68
SMARCE1-219ENST00000583294 GPKOWQ92917 476 aaPredicted RBP eCLIP10.81□□□□□ -0.68
SMARCE1-219ENST00000583294 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-219ENST00000583294 ALDH1A1P00352 501 aa10.8□□□□□ -0.68
SMARCE1-219ENST00000583294 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMARCE1-219ENST00000583294 SEMA3FQ13275 785 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 291.3 ms