RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 LIMD1Q9UGP4 676 aa8.3□□□□□ -1.08
PTPRM-215ENST00000583289 SIAH2O43255 324 aa8.29□□□□□ -1.08
PTPRM-215ENST00000583289 LILRB3O75022 631 aa8.29□□□□□ -1.08
PTPRM-215ENST00000583289 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
PTPRM-215ENST00000583289 HPS1Q92902 700 aa8.29□□□□□ -1.08
PTPRM-215ENST00000583289 F12P00748 615 aaPredicted RBP8.28□□□□□ -1.08
PTPRM-215ENST00000583289 VARSP26640 1264 aaKnown RBP8.28□□□□□ -1.08
PTPRM-215ENST00000583289 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
PTPRM-215ENST00000583289 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
PTPRM-215ENST00000583289 PLEKHG3A1L390 1219 aa8.27□□□□□ -1.09
PTPRM-215ENST00000583289 QPCTQ16769 361 aa8.27□□□□□ -1.09
PTPRM-215ENST00000583289 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
PTPRM-215ENST00000583289 TSC1Q92574 1164 aa8.27□□□□□ -1.09
PTPRM-215ENST00000583289 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
PTPRM-215ENST00000583289 GMPR2Q9P2T1 348 aaKnown RBP8.27□□□□□ -1.09
PTPRM-215ENST00000583289 C11orf95C9JLR9 678 aaPredicted RBP8.26□□□□□ -1.09
PTPRM-215ENST00000583289 MPNDQ8N594 471 aa8.26□□□□□ -1.09
PTPRM-215ENST00000583289 SENP2Q9HC62 589 aa8.26□□□□□ -1.09
PTPRM-215ENST00000583289 MAP10Q9P2G4 905 aa8.26□□□□□ -1.09
PTPRM-215ENST00000583289 ARMC2Q8NEN0 867 aa8.25□□□□□ -1.09
PTPRM-215ENST00000583289 DDRGK1Q96HY6 314 aa8.25□□□□□ -1.09
PTPRM-215ENST00000583289 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
PTPRM-215ENST00000583289 FAM174AQ8TBP5 190 aa8.24□□□□□ -1.09
PTPRM-215ENST00000583289 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
PTPRM-215ENST00000583289 TLL2Q9Y6L7 1015 aa8.24□□□□□ -1.09
PTPRM-215ENST00000583289 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
PTPRM-215ENST00000583289 POLR3EQ9NVU0 708 aa8.23□□□□□ -1.09
PTPRM-215ENST00000583289 SH3D19Q5HYK7 790 aa8.22□□□□□ -1.09
PTPRM-215ENST00000583289 RTL5Q5HYW3 569 aaPredicted RBP8.22□□□□□ -1.09
PTPRM-215ENST00000583289 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
PTPRM-215ENST00000583289 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.1
PTPRM-215ENST00000583289 NBPF14Q5TI25 921 aa8.21□□□□□ -1.1
PTPRM-215ENST00000583289 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
PTPRM-215ENST00000583289 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
PTPRM-215ENST00000583289 CAPN5O15484 640 aaPredicted RBP8.2□□□□□ -1.1
PTPRM-215ENST00000583289 AGERQ15109 404 aa8.2□□□□□ -1.1
PTPRM-215ENST00000583289 FOXJ1Q92949 421 aa8.2□□□□□ -1.1
PTPRM-215ENST00000583289 ADH1CP00326 375 aa8.19□□□□□ -1.1
PTPRM-215ENST00000583289 NNTQ13423 1086 aa8.19□□□□□ -1.1
PTPRM-215ENST00000583289 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
PTPRM-215ENST00000583289 GPKOWQ92917 476 aaPredicted RBP eCLIP8.18□□□□□ -1.1
PTPRM-215ENST00000583289 CDK15Q96Q40 435 aa8.18□□□□□ -1.1
PTPRM-215ENST00000583289 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
PTPRM-215ENST00000583289 SNRPBP14678 240 aaKnown RBP8.16□□□□□ -1.1
PTPRM-215ENST00000583289 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPRM-215ENST00000583289 ATP1B4Q9UN42 357 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-215ENST00000583289 BMP1P13497 986 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 CTDSPL2Q05D32 466 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 NR5A1Q13285 461 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 ARID5BQ14865 1188 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 PPP2R2DQ66LE6 453 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 SH3RF1Q7Z6J0 888 aa8.15□□□□□ -1.1
PTPRM-215ENST00000583289 SH3BP5LQ7L8J4 393 aa8.14□□□□□ -1.11
PTPRM-215ENST00000583289 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
PTPRM-215ENST00000583289 C1QTNF2Q9BXJ5 285 aa8.14□□□□□ -1.11
PTPRM-215ENST00000583289 WFS1O76024 890 aa8.13□□□□□ -1.11
PTPRM-215ENST00000583289 TIMP2P16035 220 aa8.13□□□□□ -1.11
PTPRM-215ENST00000583289 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
PTPRM-215ENST00000583289 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
PTPRM-215ENST00000583289 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
PTPRM-215ENST00000583289 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
PTPRM-215ENST00000583289 MAP4K5Q9Y4K4 846 aa8.13□□□□□ -1.11
PTPRM-215ENST00000583289 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
PTPRM-215ENST00000583289 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
PTPRM-215ENST00000583289 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
PTPRM-215ENST00000583289 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-215ENST00000583289 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
PTPRM-215ENST00000583289 TERTO14746 1132 aaKnown RBP8.1□□□□□ -1.11
PTPRM-215ENST00000583289 GRM5P41594 1212 aa8.1□□□□□ -1.11
PTPRM-215ENST00000583289 SCARF1Q14162 830 aa8.1□□□□□ -1.11
PTPRM-215ENST00000583289 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
PTPRM-215ENST00000583289 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
PTPRM-215ENST00000583289 PNMA1Q8ND90 353 aa8.1□□□□□ -1.11
PTPRM-215ENST00000583289 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
PTPRM-215ENST00000583289 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
PTPRM-215ENST00000583289 ZIC2O95409 532 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-215ENST00000583289 NR3C2P08235 984 aa8.09□□□□□ -1.11
PTPRM-215ENST00000583289 FSHRP23945 695 aa8.09□□□□□ -1.11
PTPRM-215ENST00000583289 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-215ENST00000583289 ZFP42Q96MM3 310 aa8.09□□□□□ -1.11
PTPRM-215ENST00000583289 ARHGAP9Q9BRR9 750 aa8.09□□□□□ -1.11
PTPRM-215ENST00000583289 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
PTPRM-215ENST00000583289 AP1G2O75843 785 aa8.08□□□□□ -1.12
PTPRM-215ENST00000583289 FBXO31Q5XUX0 539 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-215ENST00000583289 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
PTPRM-215ENST00000583289 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
PTPRM-215ENST00000583289 NR6A1Q15406 480 aa8.07□□□□□ -1.12
PTPRM-215ENST00000583289 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
PTPRM-215ENST00000583289 ERFEQ4G0M1 354 aa8.07□□□□□ -1.12
PTPRM-215ENST00000583289 GPSM3Q9Y4H4 160 aa8.07□□□□□ -1.12
PTPRM-215ENST00000583289 UPP2O95045 317 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 RFC5P40937 340 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 NPAS3Q8IXF0 933 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 SLC16A10Q8TF71 515 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 SLC10A4Q96EP9 437 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
PTPRM-215ENST00000583289 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
PTPRM-215ENST00000583289 ZFAND3Q9H8U3 227 aa8.06□□□□□ -1.12
PTPRM-215ENST00000583289 NXF1Q9UBU9 619 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms