RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
CCDC57-216ENST00000582885 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
CCDC57-216ENST00000582885 MIER1Q8N108 512 aa16.36■□□□□ 0.21
CCDC57-216ENST00000582885 TTC21BQ7Z4L5 1316 aa16.36■□□□□ 0.21
CCDC57-216ENST00000582885 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
CCDC57-216ENST00000582885 ROBO1Q9Y6N7 1651 aa16.36■□□□□ 0.21
CCDC57-216ENST00000582885 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
CCDC57-216ENST00000582885 FYB1O15117 783 aa16.35■□□□□ 0.21
CCDC57-216ENST00000582885 PSME1Q06323 249 aa16.34■□□□□ 0.21
CCDC57-216ENST00000582885 BRINP3Q76B58 766 aa16.34■□□□□ 0.21
CCDC57-216ENST00000582885 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.2
CCDC57-216ENST00000582885 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
CCDC57-216ENST00000582885 PXDNQ92626 1479 aa16.33■□□□□ 0.2
CCDC57-216ENST00000582885 FOXO3O43524 673 aa16.32■□□□□ 0.2
CCDC57-216ENST00000582885 USP31Q70CQ4 1352 aa16.32■□□□□ 0.2
CCDC57-216ENST00000582885 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC57-216ENST00000582885 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
CCDC57-216ENST00000582885 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
CCDC57-216ENST00000582885 CCER2I3L3R5 266 aa16.31■□□□□ 0.2
CCDC57-216ENST00000582885 TOM1O60784 492 aa16.31■□□□□ 0.2
CCDC57-216ENST00000582885 KRT28Q7Z3Y7 464 aa16.31■□□□□ 0.2
CCDC57-216ENST00000582885 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
CCDC57-216ENST00000582885 OVOS2A0A0J9YW53 1432 aa16.3■□□□□ 0.2
CCDC57-216ENST00000582885 OVOS2Q6IE36 1432 aa16.3■□□□□ 0.2
CCDC57-216ENST00000582885 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
CCDC57-216ENST00000582885 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
CCDC57-216ENST00000582885 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
CCDC57-216ENST00000582885 NME9Q86XW9 330 aa16.29■□□□□ 0.2
CCDC57-216ENST00000582885 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
CCDC57-216ENST00000582885 SOS2Q07890 1332 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-216ENST00000582885 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
CCDC57-216ENST00000582885 COG3Q96JB2 828 aa16.27■□□□□ 0.2
CCDC57-216ENST00000582885 PHLPP1O60346 1717 aa16.27■□□□□ 0.19
CCDC57-216ENST00000582885 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
CCDC57-216ENST00000582885 NLRP13Q86W25 1043 aa16.26■□□□□ 0.19
CCDC57-216ENST00000582885 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
CCDC57-216ENST00000582885 TNS3Q68CZ2 1445 aa16.26■□□□□ 0.19
CCDC57-216ENST00000582885 LTN1O94822 1766 aa16.26■□□□□ 0.19
CCDC57-216ENST00000582885 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
CCDC57-216ENST00000582885 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-216ENST00000582885 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-216ENST00000582885 MED1Q15648 1581 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-216ENST00000582885 SLIT3O75094 1523 aa16.24■□□□□ 0.19
CCDC57-216ENST00000582885 PHRF1Q9P1Y6 1649 aaKnown RBP16.24■□□□□ 0.19
CCDC57-216ENST00000582885 SPATA31A3Q5VYP0 1347 aa16.23■□□□□ 0.19
CCDC57-216ENST00000582885 UBAP1LF5GYI3 381 aa16.23■□□□□ 0.19
CCDC57-216ENST00000582885 NLRP6P59044 892 aa16.23■□□□□ 0.19
CCDC57-216ENST00000582885 XPCQ01831 940 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-216ENST00000582885 DDX17Q92841 729 aaKnown RBP16.23■□□□□ 0.19
CCDC57-216ENST00000582885 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
CCDC57-216ENST00000582885 ARHGEF10O15013 1369 aa16.23■□□□□ 0.19
CCDC57-216ENST00000582885 COL16A1Q07092 1604 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-216ENST00000582885 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
CCDC57-216ENST00000582885 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
CCDC57-216ENST00000582885 COL22A1Q8NFW1 1626 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-216ENST00000582885 USP19O94966 1318 aa16.2■□□□□ 0.18
CCDC57-216ENST00000582885 NFAT5O94916 1531 aa16.2■□□□□ 0.18
CCDC57-216ENST00000582885 KCNH5Q8NCM2 988 aa16.19■□□□□ 0.18
CCDC57-216ENST00000582885 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
CCDC57-216ENST00000582885 INSRP06213 1382 aa16.18■□□□□ 0.18
CCDC57-216ENST00000582885 TNNT2P45379 298 aaPredicted RBP16.18■□□□□ 0.18
CCDC57-216ENST00000582885 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
CCDC57-216ENST00000582885 CDK12Q9NYV4 1490 aaPredicted RBP16.17■□□□□ 0.18
CCDC57-216ENST00000582885 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
CCDC57-216ENST00000582885 KIF24Q5T7B8 1368 aa16.17■□□□□ 0.18
CCDC57-216ENST00000582885 MTHFSP49914 203 aa16.17■□□□□ 0.18
CCDC57-216ENST00000582885 LRRC59Q96AG4 307 aaKnown RBP16.17■□□□□ 0.18
CCDC57-216ENST00000582885 PNPLA6Q8IY17 1366 aa16.16■□□□□ 0.18
CCDC57-216ENST00000582885 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
CCDC57-216ENST00000582885 NUTM2GQ5VZR2 741 aa16.16■□□□□ 0.18
CCDC57-216ENST00000582885 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
CCDC57-216ENST00000582885 PIP4K2BP78356 416 aa16.15■□□□□ 0.18
CCDC57-216ENST00000582885 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
CCDC57-216ENST00000582885 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
CCDC57-216ENST00000582885 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
CCDC57-216ENST00000582885 COL3A1P02461 1466 aaPredicted RBP16.15■□□□□ 0.18
CCDC57-216ENST00000582885 ABCC6O95255 1503 aa16.14■□□□□ 0.18
CCDC57-216ENST00000582885 COL18A1P39060 1754 aa16.14■□□□□ 0.17
CCDC57-216ENST00000582885 GCP02774 474 aa16.13■□□□□ 0.17
CCDC57-216ENST00000582885 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
CCDC57-216ENST00000582885 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
CCDC57-216ENST00000582885 FBLN1P23142 703 aa16.12■□□□□ 0.17
CCDC57-216ENST00000582885 MAP3K19Q56UN5 1328 aa16.12■□□□□ 0.17
CCDC57-216ENST00000582885 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
CCDC57-216ENST00000582885 CPDO75976 1380 aa16.11■□□□□ 0.17
CCDC57-216ENST00000582885 FLT4P35916 1363 aa16.11■□□□□ 0.17
CCDC57-216ENST00000582885 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
CCDC57-216ENST00000582885 ARHGEF25Q86VW2 580 aa16.1■□□□□ 0.17
CCDC57-216ENST00000582885 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
CCDC57-216ENST00000582885 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
CCDC57-216ENST00000582885 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.17
CCDC57-216ENST00000582885 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
CCDC57-216ENST00000582885 SOX12O15370 315 aa16.07■□□□□ 0.16
CCDC57-216ENST00000582885 AMPHP49418 695 aa16.07■□□□□ 0.16
CCDC57-216ENST00000582885 IP6K1Q92551 441 aa16.07■□□□□ 0.16
CCDC57-216ENST00000582885 BLMP54132 1417 aaPredicted RBP16.07■□□□□ 0.16
CCDC57-216ENST00000582885 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
CCDC57-216ENST00000582885 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
CCDC57-216ENST00000582885 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
CCDC57-216ENST00000582885 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms