RNA–Protein interactions for RNA: ENST00000582833.5

NUP85-219, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-219ENST00000582833 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
NUP85-219ENST00000582833 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
NUP85-219ENST00000582833 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
NUP85-219ENST00000582833 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
NUP85-219ENST00000582833 ALS2Q96Q42 1657 aa13.21□□□□□ -0.29
NUP85-219ENST00000582833 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.29
NUP85-219ENST00000582833 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
NUP85-219ENST00000582833 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
NUP85-219ENST00000582833 SPATA31A5Q5VU36 1347 aa13.2□□□□□ -0.3
NUP85-219ENST00000582833 SPATA31A7Q8IWB4 1347 aa13.2□□□□□ -0.3
NUP85-219ENST00000582833 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
NUP85-219ENST00000582833 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
NUP85-219ENST00000582833 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
NUP85-219ENST00000582833 ATP7BP35670 1465 aa13.19□□□□□ -0.3
NUP85-219ENST00000582833 PLEKHG3A1L390 1219 aa13.19□□□□□ -0.3
NUP85-219ENST00000582833 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
NUP85-219ENST00000582833 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
NUP85-219ENST00000582833 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
NUP85-219ENST00000582833 POLR3AO14802 1390 aaPredicted RBP13.18□□□□□ -0.3
NUP85-219ENST00000582833 ITSN1Q15811 1721 aa13.17□□□□□ -0.3
NUP85-219ENST00000582833 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
NUP85-219ENST00000582833 ACEP12821 1306 aa13.16□□□□□ -0.3
NUP85-219ENST00000582833 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
NUP85-219ENST00000582833 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
NUP85-219ENST00000582833 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
NUP85-219ENST00000582833 SPATA31A1Q5TZJ5 1347 aa13.15□□□□□ -0.3
NUP85-219ENST00000582833 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
NUP85-219ENST00000582833 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
NUP85-219ENST00000582833 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
NUP85-219ENST00000582833 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
NUP85-219ENST00000582833 NUTM2GQ5VZR2 741 aa13.14□□□□□ -0.31
NUP85-219ENST00000582833 RREB1Q92766 1687 aa13.13□□□□□ -0.31
NUP85-219ENST00000582833 A0A0G2JS52 829 aa13.12□□□□□ -0.31
NUP85-219ENST00000582833 BAG6P46379 1132 aa13.12□□□□□ -0.31
NUP85-219ENST00000582833 MYT1Q01538 1121 aa13.12□□□□□ -0.31
NUP85-219ENST00000582833 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
NUP85-219ENST00000582833 PHRF1Q9P1Y6 1649 aaKnown RBP13.12□□□□□ -0.31
NUP85-219ENST00000582833 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
NUP85-219ENST00000582833 USP19O94966 1318 aa13.11□□□□□ -0.31
NUP85-219ENST00000582833 CPDO75976 1380 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 L3MBTL2Q969R5 705 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 CABP2Q9NPB3 220 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 STRN4Q9NRL3 753 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
NUP85-219ENST00000582833 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
NUP85-219ENST00000582833 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
NUP85-219ENST00000582833 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
NUP85-219ENST00000582833 GCP02774 474 aa13.09□□□□□ -0.31
NUP85-219ENST00000582833 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
NUP85-219ENST00000582833 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
NUP85-219ENST00000582833 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
NUP85-219ENST00000582833 FAM196AQ6ZSG2 479 aa13.08□□□□□ -0.32
NUP85-219ENST00000582833 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
NUP85-219ENST00000582833 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
NUP85-219ENST00000582833 PPIP5K1Q6PFW1 1433 aa13.07□□□□□ -0.32
NUP85-219ENST00000582833 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
NUP85-219ENST00000582833 EVA1CP58658 441 aa13.07□□□□□ -0.32
NUP85-219ENST00000582833 SRPK2P78362 688 aaKnown RBP13.07□□□□□ -0.32
NUP85-219ENST00000582833 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
NUP85-219ENST00000582833 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
NUP85-219ENST00000582833 TRIM37O94972 964 aa13.06□□□□□ -0.32
NUP85-219ENST00000582833 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
NUP85-219ENST00000582833 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
NUP85-219ENST00000582833 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
NUP85-219ENST00000582833 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
NUP85-219ENST00000582833 NRKQ7Z2Y5 1582 aa13.04□□□□□ -0.32
NUP85-219ENST00000582833 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
NUP85-219ENST00000582833 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
NUP85-219ENST00000582833 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
NUP85-219ENST00000582833 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
NUP85-219ENST00000582833 USP6P35125 1406 aa13.04□□□□□ -0.32
NUP85-219ENST00000582833 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
NUP85-219ENST00000582833 SBF2Q86WG5 1849 aa13.03□□□□□ -0.32
NUP85-219ENST00000582833 WNK3Q9BYP7 1800 aa13.02□□□□□ -0.32
NUP85-219ENST00000582833 APBA3O96018 575 aa13.02□□□□□ -0.33
NUP85-219ENST00000582833 NLRP6P59044 892 aa13.02□□□□□ -0.33
NUP85-219ENST00000582833 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
NUP85-219ENST00000582833 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
NUP85-219ENST00000582833 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
NUP85-219ENST00000582833 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.33
NUP85-219ENST00000582833 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
NUP85-219ENST00000582833 EVC2Q86UK5 1308 aa13□□□□□ -0.33
NUP85-219ENST00000582833 SLIT3O75094 1523 aa12.99□□□□□ -0.33
NUP85-219ENST00000582833 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
NUP85-219ENST00000582833 ARHGEF25Q86VW2 580 aa12.99□□□□□ -0.33
NUP85-219ENST00000582833 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
NUP85-219ENST00000582833 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
NUP85-219ENST00000582833 CRB1P82279 1406 aa12.98□□□□□ -0.33
NUP85-219ENST00000582833 TTC21BQ7Z4L5 1316 aa12.98□□□□□ -0.33
NUP85-219ENST00000582833 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
NUP85-219ENST00000582833 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
NUP85-219ENST00000582833 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
NUP85-219ENST00000582833 PTF1AQ7RTS3 328 aa12.96□□□□□ -0.33
NUP85-219ENST00000582833 COL18A1P39060 1754 aa12.96□□□□□ -0.34
NUP85-219ENST00000582833 CHD4Q14839 1912 aa12.96□□□□□ -0.34
NUP85-219ENST00000582833 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
NUP85-219ENST00000582833 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
NUP85-219ENST00000582833 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms