RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 FAM98CQ17RN3 349 aaKnown RBP21.14■□□□□ 0.97
CDC42EP4-208ENST00000582303 ABCA3Q99758 1704 aa21.13■□□□□ 0.97
CDC42EP4-208ENST00000582303 BAG6P46379 1132 aa21.13■□□□□ 0.97
CDC42EP4-208ENST00000582303 COL14A1Q05707 1796 aaKnown RBP21.12■□□□□ 0.97
CDC42EP4-208ENST00000582303 TRPM3Q9HCF6 1732 aaPredicted RBP21.12■□□□□ 0.97
CDC42EP4-208ENST00000582303 DEFB132Q7Z7B7 95 aa21.11■□□□□ 0.97
CDC42EP4-208ENST00000582303 CDK19Q9BWU1 502 aa21.11■□□□□ 0.97
CDC42EP4-208ENST00000582303 CCDC61Q9Y6R9 512 aa21.11■□□□□ 0.97
CDC42EP4-208ENST00000582303 SPATA31A5Q5VU36 1347 aa21.1■□□□□ 0.97
CDC42EP4-208ENST00000582303 SPATA31A7Q8IWB4 1347 aa21.1■□□□□ 0.97
CDC42EP4-208ENST00000582303 ALS2Q96Q42 1657 aa21.1■□□□□ 0.97
CDC42EP4-208ENST00000582303 ATP7BP35670 1465 aa21.1■□□□□ 0.97
CDC42EP4-208ENST00000582303 ITSN1Q15811 1721 aa21.07■□□□□ 0.96
CDC42EP4-208ENST00000582303 POLR3AO14802 1390 aaPredicted RBP21.07■□□□□ 0.96
CDC42EP4-208ENST00000582303 BRWD3Q6RI45 1802 aa21.06■□□□□ 0.96
CDC42EP4-208ENST00000582303 ARHGEF28Q8N1W1 1705 aaKnown RBP21.05■□□□□ 0.96
CDC42EP4-208ENST00000582303 PLEKHG3A1L390 1219 aa21.05■□□□□ 0.96
CDC42EP4-208ENST00000582303 NBPF8Q3BBV2 869 aa21.05■□□□□ 0.96
CDC42EP4-208ENST00000582303 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
CDC42EP4-208ENST00000582303 ACEP12821 1306 aa21.04■□□□□ 0.96
CDC42EP4-208ENST00000582303 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
CDC42EP4-208ENST00000582303 EVA1CP58658 441 aa21.03■□□□□ 0.96
CDC42EP4-208ENST00000582303 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
CDC42EP4-208ENST00000582303 SPATA31A1Q5TZJ5 1347 aa21.03■□□□□ 0.96
CDC42EP4-208ENST00000582303 SRPK2P78362 688 aaKnown RBP21.02■□□□□ 0.96
CDC42EP4-208ENST00000582303 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
CDC42EP4-208ENST00000582303 KIAA1210Q9ULL0 1709 aa21.01■□□□□ 0.95
CDC42EP4-208ENST00000582303 BRD4O60885 1362 aaPredicted RBP21.01■□□□□ 0.95
CDC42EP4-208ENST00000582303 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
CDC42EP4-208ENST00000582303 CENPJQ9HC77 1338 aaPredicted RBP21.01■□□□□ 0.95
CDC42EP4-208ENST00000582303 CHRNA2Q15822 529 aa21■□□□□ 0.95
CDC42EP4-208ENST00000582303 FAM196AQ6ZSG2 479 aa21■□□□□ 0.95
CDC42EP4-208ENST00000582303 NLRP13Q86W25 1043 aa21■□□□□ 0.95
CDC42EP4-208ENST00000582303 NUTM2GQ5VZR2 741 aa20.98■□□□□ 0.95
CDC42EP4-208ENST00000582303 CPDO75976 1380 aa20.97■□□□□ 0.95
CDC42EP4-208ENST00000582303 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
CDC42EP4-208ENST00000582303 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
CDC42EP4-208ENST00000582303 CRYBG1Q9Y4K1 1723 aa20.97■□□□□ 0.95
CDC42EP4-208ENST00000582303 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
CDC42EP4-208ENST00000582303 EN1Q05925 392 aaPredicted RBP20.96■□□□□ 0.95
CDC42EP4-208ENST00000582303 PDE3BQ13370 1112 aa20.96■□□□□ 0.95
CDC42EP4-208ENST00000582303 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.95
CDC42EP4-208ENST00000582303 THRAP3Q9Y2W1 955 aaKnown RBP20.95■□□□□ 0.94
CDC42EP4-208ENST00000582303 USP19O94966 1318 aa20.95■□□□□ 0.94
CDC42EP4-208ENST00000582303 THSD7AQ9UPZ6 1657 aa20.95■□□□□ 0.94
CDC42EP4-208ENST00000582303 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
CDC42EP4-208ENST00000582303 FAM182BQ5T319 152 aa20.94■□□□□ 0.94
CDC42EP4-208ENST00000582303 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
CDC42EP4-208ENST00000582303 SSH2Q76I76 1423 aa20.94■□□□□ 0.94
CDC42EP4-208ENST00000582303 PHRF1Q9P1Y6 1649 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-208ENST00000582303 TOPAZ1Q8N9V7 1692 aa20.93■□□□□ 0.94
CDC42EP4-208ENST00000582303 GCP02774 474 aa20.93■□□□□ 0.94
CDC42EP4-208ENST00000582303 TCP11L2Q8N4U5 519 aa20.93■□□□□ 0.94
CDC42EP4-208ENST00000582303 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
CDC42EP4-208ENST00000582303 RGPD1P0DJD0 1748 aa20.92■□□□□ 0.94
CDC42EP4-208ENST00000582303 CABP2Q9NPB3 220 aa20.92■□□□□ 0.94
CDC42EP4-208ENST00000582303 PSDA5PKW4 1024 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-208ENST00000582303 EVC2Q86UK5 1308 aa20.9■□□□□ 0.94
CDC42EP4-208ENST00000582303 TRIM37O94972 964 aa20.9■□□□□ 0.94
CDC42EP4-208ENST00000582303 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
CDC42EP4-208ENST00000582303 CABP1Q9NZU7 370 aa20.89■□□□□ 0.93
CDC42EP4-208ENST00000582303 LRP5O75197 1615 aa20.89■□□□□ 0.93
CDC42EP4-208ENST00000582303 NRKQ7Z2Y5 1582 aa20.89■□□□□ 0.93
CDC42EP4-208ENST00000582303 APBA3O96018 575 aa20.88■□□□□ 0.93
CDC42EP4-208ENST00000582303 NLRP6P59044 892 aa20.88■□□□□ 0.93
CDC42EP4-208ENST00000582303 L3MBTL2Q969R5 705 aa20.88■□□□□ 0.93
CDC42EP4-208ENST00000582303 USP6P35125 1406 aa20.87■□□□□ 0.93
CDC42EP4-208ENST00000582303 CAMTA1Q9Y6Y1 1673 aa20.86■□□□□ 0.93
CDC42EP4-208ENST00000582303 R3HDM1Q15032 1099 aaKnown RBP20.86■□□□□ 0.93
CDC42EP4-208ENST00000582303 EZH2Q15910 746 aaKnown RBP20.86■□□□□ 0.93
CDC42EP4-208ENST00000582303 CAMKK2Q96RR4 588 aa20.86■□□□□ 0.93
CDC42EP4-208ENST00000582303 ZNF692Q9BU19 519 aaPredicted RBP20.86■□□□□ 0.93
CDC42EP4-208ENST00000582303 AATKQ6ZMQ8 1374 aa20.85■□□□□ 0.93
CDC42EP4-208ENST00000582303 CRB1P82279 1406 aa20.84■□□□□ 0.93
CDC42EP4-208ENST00000582303 ROCK2O75116 1388 aaKnown RBP20.84■□□□□ 0.93
CDC42EP4-208ENST00000582303 COL5A2P05997 1499 aaPredicted RBP20.83■□□□□ 0.93
CDC42EP4-208ENST00000582303 NBPF14Q5TI25 921 aa20.83■□□□□ 0.93
CDC42EP4-208ENST00000582303 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
CDC42EP4-208ENST00000582303 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
CDC42EP4-208ENST00000582303 LMO7Q8WWI1 1683 aa20.82■□□□□ 0.92
CDC42EP4-208ENST00000582303 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
CDC42EP4-208ENST00000582303 TOM1L2Q6ZVM7 507 aa20.8■□□□□ 0.92
CDC42EP4-208ENST00000582303 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
CDC42EP4-208ENST00000582303 TNS1Q9HBL0 1735 aaKnown RBP20.8■□□□□ 0.92
CDC42EP4-208ENST00000582303 TTC21AQ8NDW8 1320 aa20.78■□□□□ 0.92
CDC42EP4-208ENST00000582303 DDB1Q16531 1140 aa20.78■□□□□ 0.92
CDC42EP4-208ENST00000582303 SLIT3O75094 1523 aa20.78■□□□□ 0.92
CDC42EP4-208ENST00000582303 OVOS2A0A0G2JMS6 1433 aa20.78■□□□□ 0.92
CDC42EP4-208ENST00000582303 OVOS2A0A0J9YW53 1432 aa20.78■□□□□ 0.92
CDC42EP4-208ENST00000582303 OVOS2Q6IE36 1432 aa20.78■□□□□ 0.92
CDC42EP4-208ENST00000582303 NEUROD1Q13562 356 aa20.77■□□□□ 0.92
CDC42EP4-208ENST00000582303 WDR17Q8IZU2 1322 aa20.76■□□□□ 0.91
CDC42EP4-208ENST00000582303 SIN3AQ96ST3 1273 aa20.75■□□□□ 0.91
CDC42EP4-208ENST00000582303 TTC21BQ7Z4L5 1316 aa20.75■□□□□ 0.91
CDC42EP4-208ENST00000582303 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
CDC42EP4-208ENST00000582303 CPSF1Q10570 1443 aaKnown RBP20.73■□□□□ 0.91
CDC42EP4-208ENST00000582303 ARHGEF25Q86VW2 580 aa20.73■□□□□ 0.91
CDC42EP4-208ENST00000582303 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
CDC42EP4-208ENST00000582303 CSB-PGBD3P0DP91 1061 aa20.72■□□□□ 0.91
CDC42EP4-208ENST00000582303 KTN1Q86UP2 1357 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms