RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 PNMA1Q8ND90 353 aa14.08□□□□□ -0.16
CDH8-207ENST00000582242 NKX2-3Q8TAU0 364 aa14.08□□□□□ -0.16
CDH8-207ENST00000582242 PRKD2Q9BZL6 878 aa14.08□□□□□ -0.16
CDH8-207ENST00000582242 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.08□□□□□ -0.16
CDH8-207ENST00000582242 LAPTM4AQ15012 233 aa14.07□□□□□ -0.16
CDH8-207ENST00000582242 PDIA4P13667 645 aaKnown RBP14.06□□□□□ -0.16
CDH8-207ENST00000582242 JUNDP17535 347 aa14.06□□□□□ -0.16
CDH8-207ENST00000582242 SOX11P35716 441 aa14.06□□□□□ -0.16
CDH8-207ENST00000582242 ALG2Q9H553 416 aa14.06□□□□□ -0.16
CDH8-207ENST00000582242 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
CDH8-207ENST00000582242 F12P00748 615 aaPredicted RBP14.05□□□□□ -0.16
CDH8-207ENST00000582242 PTPRNQ16849 979 aa14.05□□□□□ -0.16
CDH8-207ENST00000582242 MSS51Q4VC12 460 aa14.04□□□□□ -0.16
CDH8-207ENST00000582242 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
CDH8-207ENST00000582242 ZPR1O75312 459 aa14.03□□□□□ -0.16
CDH8-207ENST00000582242 ZCCHC6Q5VYS8 1495 aaKnown RBP14□□□□□ -0.17
CDH8-207ENST00000582242 ZC3H4Q9UPT8 1303 aaKnown RBP14□□□□□ -0.17
CDH8-207ENST00000582242 GFRA3O60609 400 aa14□□□□□ -0.17
CDH8-207ENST00000582242 GGCXP38435 758 aa14□□□□□ -0.17
CDH8-207ENST00000582242 FKBPLQ9UIM3 349 aa13.99□□□□□ -0.17
CDH8-207ENST00000582242 DXOO77932 396 aaKnown RBP13.98□□□□□ -0.17
CDH8-207ENST00000582242 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
CDH8-207ENST00000582242 NR1H3Q13133 447 aa13.98□□□□□ -0.17
CDH8-207ENST00000582242 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
CDH8-207ENST00000582242 SPSB2Q99619 263 aa13.98□□□□□ -0.17
CDH8-207ENST00000582242 MAP10Q9P2G4 905 aa13.98□□□□□ -0.17
CDH8-207ENST00000582242 FAM160A2Q8N612 972 aaPredicted RBP13.97□□□□□ -0.17
CDH8-207ENST00000582242 TRAIPQ9BWF2 469 aa13.97□□□□□ -0.17
CDH8-207ENST00000582242 PPP1R12CQ9BZL4 782 aa13.97□□□□□ -0.17
CDH8-207ENST00000582242 MMP16P51512 607 aa13.96□□□□□ -0.17
CDH8-207ENST00000582242 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDH8-207ENST00000582242 PBXIP1Q96AQ6 731 aa13.96□□□□□ -0.17
CDH8-207ENST00000582242 ZBBXA8MT70 800 aa13.95□□□□□ -0.18
CDH8-207ENST00000582242 SEMA3FQ13275 785 aa13.95□□□□□ -0.18
CDH8-207ENST00000582242 RETREG2Q8NC44 543 aa13.95□□□□□ -0.18
CDH8-207ENST00000582242 UCN2Q96RP3 112 aa13.95□□□□□ -0.18
CDH8-207ENST00000582242 NRG2O14511 850 aaPredicted RBP13.94□□□□□ -0.18
CDH8-207ENST00000582242 FBXO45P0C2W1 286 aa13.94□□□□□ -0.18
CDH8-207ENST00000582242 CCNYL3P0C7X3 344 aa13.94□□□□□ -0.18
CDH8-207ENST00000582242 LCE2BO14633 110 aa13.93□□□□□ -0.18
CDH8-207ENST00000582242 NUDT12Q9BQG2 462 aa13.93□□□□□ -0.18
CDH8-207ENST00000582242 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
CDH8-207ENST00000582242 PODXL2Q9NZ53 605 aa13.93□□□□□ -0.18
CDH8-207ENST00000582242 PALM3A6NDB9 673 aaPredicted RBP13.92□□□□□ -0.18
CDH8-207ENST00000582242 CTHP32929 405 aa13.92□□□□□ -0.18
CDH8-207ENST00000582242 ACIN1Q9UKV3 1341 aaKnown RBP13.91□□□□□ -0.18
CDH8-207ENST00000582242 TLL1O43897 1013 aa13.91□□□□□ -0.18
CDH8-207ENST00000582242 ADH1BP00325 375 aa13.91□□□□□ -0.18
CDH8-207ENST00000582242 PRDM9Q9NQV7 894 aa13.91□□□□□ -0.18
CDH8-207ENST00000582242 SRPK2P78362 688 aaKnown RBP13.9□□□□□ -0.18
CDH8-207ENST00000582242 KCNH2Q12809 1159 aa13.9□□□□□ -0.18
CDH8-207ENST00000582242 ARMC2Q8NEN0 867 aa13.9□□□□□ -0.18
CDH8-207ENST00000582242 GPKOWQ92917 476 aaPredicted RBP eCLIP13.9□□□□□ -0.18
CDH8-207ENST00000582242 RFX1P22670 979 aa13.89□□□□□ -0.19
CDH8-207ENST00000582242 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
CDH8-207ENST00000582242 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.88□□□□□ -0.19
CDH8-207ENST00000582242 RNF223E7ERA6 249 aa13.88□□□□□ -0.19
CDH8-207ENST00000582242 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
CDH8-207ENST00000582242 TFIP11Q9UBB9 837 aaKnown RBP13.88□□□□□ -0.19
CDH8-207ENST00000582242 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
CDH8-207ENST00000582242 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
CDH8-207ENST00000582242 PDZRN3Q9UPQ7 1066 aa13.85□□□□□ -0.19
CDH8-207ENST00000582242 MAFBQ9Y5Q3 323 aaPredicted RBP13.85□□□□□ -0.19
CDH8-207ENST00000582242 ATP9BO43861 1147 aa13.84□□□□□ -0.19
CDH8-207ENST00000582242 PDE4CQ08493 712 aa13.84□□□□□ -0.19
CDH8-207ENST00000582242 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
CDH8-207ENST00000582242 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
CDH8-207ENST00000582242 PTK2Q05397 1052 aa13.83□□□□□ -0.2
CDH8-207ENST00000582242 TBC1D9Q6ZT07 1266 aa13.83□□□□□ -0.2
CDH8-207ENST00000582242 KCTD17Q8N5Z5 321 aa13.83□□□□□ -0.2
CDH8-207ENST00000582242 EMID1Q96A84 441 aaPredicted RBP13.83□□□□□ -0.2
CDH8-207ENST00000582242 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
CDH8-207ENST00000582242 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
CDH8-207ENST00000582242 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
CDH8-207ENST00000582242 S1PR4O95977 384 aa13.81□□□□□ -0.2
CDH8-207ENST00000582242 SLC19A1P41440 591 aa13.8□□□□□ -0.2
CDH8-207ENST00000582242 OCSTAMPQ9BR26 566 aa13.8□□□□□ -0.2
CDH8-207ENST00000582242 USTQ9Y2C2 406 aa13.8□□□□□ -0.2
CDH8-207ENST00000582242 MCCD1P59942 119 aaPredicted RBP13.79□□□□□ -0.2
CDH8-207ENST00000582242 SLC6A16Q9GZN6 736 aa13.79□□□□□ -0.2
CDH8-207ENST00000582242 UNC93B1Q9H1C4 597 aa13.79□□□□□ -0.2
CDH8-207ENST00000582242 PPEF1O14829 653 aaPredicted RBP13.77□□□□□ -0.21
CDH8-207ENST00000582242 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
CDH8-207ENST00000582242 PIK3CDO00329 1044 aa13.76□□□□□ -0.21
CDH8-207ENST00000582242 ATG7O95352 703 aa13.76□□□□□ -0.21
CDH8-207ENST00000582242 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
CDH8-207ENST00000582242 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
CDH8-207ENST00000582242 PTCRAQ6ISU1 281 aaPredicted RBP13.75□□□□□ -0.21
CDH8-207ENST00000582242 SH3BP5LQ7L8J4 393 aa13.75□□□□□ -0.21
CDH8-207ENST00000582242 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
CDH8-207ENST00000582242 ARHGAP9Q9BRR9 750 aa13.74□□□□□ -0.21
CDH8-207ENST00000582242 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
CDH8-207ENST00000582242 ZNF598Q86UK7 904 aaKnown RBP13.73□□□□□ -0.21
CDH8-207ENST00000582242 PLEKHM2Q8IWE5 1019 aa13.73□□□□□ -0.21
CDH8-207ENST00000582242 ADAM32Q8TC27 787 aa13.73□□□□□ -0.21
CDH8-207ENST00000582242 CEP126Q9P2H0 1117 aa13.73□□□□□ -0.21
CDH8-207ENST00000582242 LIAT1Q6ZQX7 453 aa13.72□□□□□ -0.21
CDH8-207ENST00000582242 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
CDH8-207ENST00000582242 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
CDH8-207ENST00000582242 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms