RNA–Protein interactions for RNA: ENST00000581767.1

DDX42-214, Transcript of DEAD-box helicase 42, humanhuman

Gene DDX42, Length 2,244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-214ENST00000581767 COL14A1Q05707 1796 aaKnown RBP12.28□□□□□ -0.44
DDX42-214ENST00000581767 TOPAZ1Q8N9V7 1692 aa12.28□□□□□ -0.44
DDX42-214ENST00000581767 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.44
DDX42-214ENST00000581767 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.44
DDX42-214ENST00000581767 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.44
DDX42-214ENST00000581767 ACEP12821 1306 aa12.27□□□□□ -0.45
DDX42-214ENST00000581767 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
DDX42-214ENST00000581767 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.45
DDX42-214ENST00000581767 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
DDX42-214ENST00000581767 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
DDX42-214ENST00000581767 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
DDX42-214ENST00000581767 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
DDX42-214ENST00000581767 QRICH2Q9H0J4 1663 aa12.25□□□□□ -0.45
DDX42-214ENST00000581767 ONECUT3O60422 494 aaPredicted RBP12.25□□□□□ -0.45
DDX42-214ENST00000581767 NRAPQ86VF7 1730 aa12.25□□□□□ -0.45
DDX42-214ENST00000581767 CRYBG1Q9Y4K1 1723 aa12.25□□□□□ -0.45
DDX42-214ENST00000581767 BRD4O60885 1362 aaPredicted RBP12.25□□□□□ -0.45
DDX42-214ENST00000581767 A0A0G2JS52 829 aa12.25□□□□□ -0.45
DDX42-214ENST00000581767 MYT1Q01538 1121 aa12.25□□□□□ -0.45
DDX42-214ENST00000581767 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
DDX42-214ENST00000581767 TRPM1Q7Z4N2 1603 aa12.24□□□□□ -0.45
DDX42-214ENST00000581767 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
DDX42-214ENST00000581767 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
DDX42-214ENST00000581767 KRT27Q7Z3Y8 459 aa12.23□□□□□ -0.45
DDX42-214ENST00000581767 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
DDX42-214ENST00000581767 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
DDX42-214ENST00000581767 PHRF1Q9P1Y6 1649 aaKnown RBP12.23□□□□□ -0.45
DDX42-214ENST00000581767 BLMP54132 1417 aaPredicted RBP12.23□□□□□ -0.45
DDX42-214ENST00000581767 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
DDX42-214ENST00000581767 BRWD3Q6RI45 1802 aa12.22□□□□□ -0.45
DDX42-214ENST00000581767 NUTM2GQ5VZR2 741 aa12.22□□□□□ -0.45
DDX42-214ENST00000581767 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
DDX42-214ENST00000581767 KIAA0232Q92628 1395 aa12.22□□□□□ -0.45
DDX42-214ENST00000581767 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
DDX42-214ENST00000581767 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
DDX42-214ENST00000581767 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.46
DDX42-214ENST00000581767 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.46
DDX42-214ENST00000581767 ZC3H6P61129 1189 aaKnown RBP12.21□□□□□ -0.46
DDX42-214ENST00000581767 EVA1CP58658 441 aa12.19□□□□□ -0.46
DDX42-214ENST00000581767 CHRNA2Q15822 529 aa12.19□□□□□ -0.46
DDX42-214ENST00000581767 CABP1Q9NZU7 370 aa12.19□□□□□ -0.46
DDX42-214ENST00000581767 USP19O94966 1318 aa12.19□□□□□ -0.46
DDX42-214ENST00000581767 STRN4Q9NRL3 753 aa12.19□□□□□ -0.46
DDX42-214ENST00000581767 TONSLQ96HA7 1378 aa12.18□□□□□ -0.46
DDX42-214ENST00000581767 NRKQ7Z2Y5 1582 aa12.18□□□□□ -0.46
DDX42-214ENST00000581767 CPDO75976 1380 aa12.18□□□□□ -0.46
DDX42-214ENST00000581767 USP6P35125 1406 aa12.18□□□□□ -0.46
DDX42-214ENST00000581767 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
DDX42-214ENST00000581767 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
DDX42-214ENST00000581767 GCP02774 474 aa12.16□□□□□ -0.46
DDX42-214ENST00000581767 NLRP6P59044 892 aa12.16□□□□□ -0.46
DDX42-214ENST00000581767 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
DDX42-214ENST00000581767 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
DDX42-214ENST00000581767 BAG6P46379 1132 aa12.15□□□□□ -0.46
DDX42-214ENST00000581767 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
DDX42-214ENST00000581767 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
DDX42-214ENST00000581767 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
DDX42-214ENST00000581767 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
DDX42-214ENST00000581767 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
DDX42-214ENST00000581767 ZBTB7CA1YPR0 619 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 SLIT3O75094 1523 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 LMO7Q8WWI1 1683 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 CAMTA1Q9Y6Y1 1673 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 RGPD1P0DJD0 1748 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 USP35Q9P2H5 1018 aa12.13□□□□□ -0.47
DDX42-214ENST00000581767 THRAP3Q9Y2W1 955 aaKnown RBP12.13□□□□□ -0.47
DDX42-214ENST00000581767 TTC21BQ7Z4L5 1316 aa12.12□□□□□ -0.47
DDX42-214ENST00000581767 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
DDX42-214ENST00000581767 KCNH5Q8NCM2 988 aa12.12□□□□□ -0.47
DDX42-214ENST00000581767 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
DDX42-214ENST00000581767 AATKQ6ZMQ8 1374 aa12.12□□□□□ -0.47
DDX42-214ENST00000581767 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
DDX42-214ENST00000581767 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
DDX42-214ENST00000581767 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
DDX42-214ENST00000581767 PIK3C2AO00443 1686 aa12.1□□□□□ -0.47
DDX42-214ENST00000581767 COL5A2P05997 1499 aaPredicted RBP12.1□□□□□ -0.47
DDX42-214ENST00000581767 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
DDX42-214ENST00000581767 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
DDX42-214ENST00000581767 CRB1P82279 1406 aa12.09□□□□□ -0.47
DDX42-214ENST00000581767 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
DDX42-214ENST00000581767 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
DDX42-214ENST00000581767 HDGFL2Q7Z4V5 671 aaPredicted RBP12.09□□□□□ -0.47
DDX42-214ENST00000581767 PUS7Q96PZ0 661 aaKnown RBP12.09□□□□□ -0.47
DDX42-214ENST00000581767 TMC1Q8TDI8 760 aa12.08□□□□□ -0.48
DDX42-214ENST00000581767 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
DDX42-214ENST00000581767 MON2Q7Z3U7 1717 aa12.07□□□□□ -0.48
DDX42-214ENST00000581767 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
DDX42-214ENST00000581767 TOM1L2Q6ZVM7 507 aa12.07□□□□□ -0.48
DDX42-214ENST00000581767 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
DDX42-214ENST00000581767 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
DDX42-214ENST00000581767 TRIM37O94972 964 aa12.06□□□□□ -0.48
DDX42-214ENST00000581767 TNS1Q9HBL0 1735 aaKnown RBP12.06□□□□□ -0.48
DDX42-214ENST00000581767 CDCA7Q9BWT1 371 aaPredicted RBP12.06□□□□□ -0.48
DDX42-214ENST00000581767 PARP4Q9UKK3 1724 aaKnown RBP12.05□□□□□ -0.48
DDX42-214ENST00000581767 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
DDX42-214ENST00000581767 COL18A1P39060 1754 aa12.05□□□□□ -0.48
DDX42-214ENST00000581767 USP31Q70CQ4 1352 aa12.05□□□□□ -0.48
DDX42-214ENST00000581767 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms