RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.03
SREBF1-220ENST00000581707 RALGAPBQ86X10 1494 aa27.75■■■□□ 2.03
SREBF1-220ENST00000581707 ATRNO75882 1429 aa27.75■■■□□ 2.03
SREBF1-220ENST00000581707 PPIP5K1Q6PFW1 1433 aa27.75■■■□□ 2.03
SREBF1-220ENST00000581707 SLIT2O94813 1529 aa27.72■■■□□ 2.03
SREBF1-220ENST00000581707 UNC5CLQ8IV45 518 aa27.71■■■□□ 2.03
SREBF1-220ENST00000581707 CABP1Q9NZU7 370 aa27.7■■■□□ 2.02
SREBF1-220ENST00000581707 RGS12O14924 1447 aa27.69■■■□□ 2.02
SREBF1-220ENST00000581707 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.69■■■□□ 2.02
SREBF1-220ENST00000581707 FAM83GA6ND36 823 aa27.68■■■□□ 2.02
SREBF1-220ENST00000581707 GJD4Q96KN9 370 aaPredicted RBP27.66■■■□□ 2.02
SREBF1-220ENST00000581707 CRYBG1Q9Y4K1 1723 aa27.65■■■□□ 2.02
SREBF1-220ENST00000581707 NUTM2GQ5VZR2 741 aa27.65■■■□□ 2.02
SREBF1-220ENST00000581707 PLCH1Q4KWH8 1693 aa27.65■■■□□ 2.02
SREBF1-220ENST00000581707 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.02
SREBF1-220ENST00000581707 SBNO2Q9Y2G9 1366 aa27.64■■■□□ 2.02
SREBF1-220ENST00000581707 ABTB2Q8N961 1025 aa27.64■■■□□ 2.02
SREBF1-220ENST00000581707 CLSPNQ9HAW4 1339 aa27.63■■■□□ 2.01
SREBF1-220ENST00000581707 BRD4O60885 1362 aaPredicted RBP27.61■■■□□ 2.01
SREBF1-220ENST00000581707 ATAD2Q6PL18 1390 aa27.6■■■□□ 2.01
SREBF1-220ENST00000581707 COL14A1Q05707 1796 aaKnown RBP27.59■■■□□ 2.01
SREBF1-220ENST00000581707 VPS72Q15906 364 aa27.59■■■□□ 2.01
SREBF1-220ENST00000581707 UPF1Q92900 1129 aaKnown RBP eCLIP27.59■■■□□ 2.01
SREBF1-220ENST00000581707 USP6P35125 1406 aa27.58■■■□□ 2.01
SREBF1-220ENST00000581707 PRDM11Q9NQV5 511 aa27.58■■■□□ 2.01
SREBF1-220ENST00000581707 BTG4Q9NY30 223 aa27.58■■■□□ 2.01
SREBF1-220ENST00000581707 PHRF1Q9P1Y6 1649 aaKnown RBP27.57■■■□□ 2
SREBF1-220ENST00000581707 ZNF692Q9BU19 519 aaPredicted RBP27.57■■■□□ 2
SREBF1-220ENST00000581707 TIMELESSQ9UNS1 1208 aa27.57■■■□□ 2
SREBF1-220ENST00000581707 CCDC9Q9Y3X0 531 aaKnown RBP27.57■■■□□ 2
SREBF1-220ENST00000581707 GLI3P10071 1580 aa27.56■■■□□ 2
SREBF1-220ENST00000581707 NLRP13Q86W25 1043 aa27.56■■■□□ 2
SREBF1-220ENST00000581707 ZC3H6P61129 1189 aaKnown RBP27.55■■■□□ 2
SREBF1-220ENST00000581707 KIAA0232Q92628 1395 aa27.55■■■□□ 2
SREBF1-220ENST00000581707 NRAPQ86VF7 1730 aa27.53■■■□□ 2
SREBF1-220ENST00000581707 USP19O94966 1318 aa27.53■■■□□ 2
SREBF1-220ENST00000581707 ST20-MTHFSA0A0A6YYL1 179 aa27.53■■■□□ 2
SREBF1-220ENST00000581707 SSH2Q76I76 1423 aa27.52■■■□□ 2
SREBF1-220ENST00000581707 CHRNA2Q15822 529 aa27.52■■■□□ 2
SREBF1-220ENST00000581707 AKAP12Q02952 1782 aa27.52■■■□□ 2
SREBF1-220ENST00000581707 GCP02774 474 aa27.5■■□□□ 1.99
SREBF1-220ENST00000581707 NLRP6P59044 892 aa27.5■■□□□ 1.99
SREBF1-220ENST00000581707 CPSF1Q10570 1443 aaKnown RBP27.5■■□□□ 1.99
SREBF1-220ENST00000581707 CCER1Q8TC90 406 aaPredicted RBP27.49■■□□□ 1.99
SREBF1-220ENST00000581707 TESK2Q96S53 571 aa27.49■■□□□ 1.99
SREBF1-220ENST00000581707 NRKQ7Z2Y5 1582 aa27.48■■□□□ 1.99
SREBF1-220ENST00000581707 TTC21BQ7Z4L5 1316 aa27.48■■□□□ 1.99
SREBF1-220ENST00000581707 TMC1Q8TDI8 760 aa27.48■■□□□ 1.99
SREBF1-220ENST00000581707 PUS7Q96PZ0 661 aaKnown RBP27.48■■□□□ 1.99
SREBF1-220ENST00000581707 KTN1Q86UP2 1357 aaKnown RBP27.48■■□□□ 1.99
SREBF1-220ENST00000581707 SLC24A1O60721 1099 aa27.47■■□□□ 1.99
SREBF1-220ENST00000581707 ONECUT3O60422 494 aaPredicted RBP27.46■■□□□ 1.99
SREBF1-220ENST00000581707 SEPT12Q8IYM1 358 aa27.46■■□□□ 1.99
SREBF1-220ENST00000581707 CPDO75976 1380 aa27.46■■□□□ 1.99
SREBF1-220ENST00000581707 PIK3C2AO00443 1686 aa27.46■■□□□ 1.99
SREBF1-220ENST00000581707 TTC21AQ8NDW8 1320 aa27.44■■□□□ 1.98
SREBF1-220ENST00000581707 SLC12A5Q9H2X9 1139 aa27.44■■□□□ 1.98
SREBF1-220ENST00000581707 USP47Q96K76 1375 aa27.44■■□□□ 1.98
SREBF1-220ENST00000581707 SPATA31A5Q5VU36 1347 aa27.42■■□□□ 1.98
SREBF1-220ENST00000581707 SPATA31A7Q8IWB4 1347 aa27.42■■□□□ 1.98
SREBF1-220ENST00000581707 BRWD3Q6RI45 1802 aa27.42■■□□□ 1.98
SREBF1-220ENST00000581707 STRN4Q9NRL3 753 aa27.42■■□□□ 1.98
SREBF1-220ENST00000581707 MON2Q7Z3U7 1717 aa27.41■■□□□ 1.98
SREBF1-220ENST00000581707 EVA1CP58658 441 aa27.41■■□□□ 1.98
SREBF1-220ENST00000581707 FAM98CQ17RN3 349 aaKnown RBP27.41■■□□□ 1.98
SREBF1-220ENST00000581707 HDGFL2Q7Z4V5 671 aaPredicted RBP27.41■■□□□ 1.98
SREBF1-220ENST00000581707 SLIT3O75094 1523 aa27.41■■□□□ 1.98
SREBF1-220ENST00000581707 CD163L1Q9NR16 1453 aa27.4■■□□□ 1.98
SREBF1-220ENST00000581707 A0A0G2JS52 829 aa27.39■■□□□ 1.98
SREBF1-220ENST00000581707 MYT1Q01538 1121 aa27.39■■□□□ 1.98
SREBF1-220ENST00000581707 TERF2IPQ9NYB0 399 aa27.39■■□□□ 1.98
SREBF1-220ENST00000581707 CAMTA1Q9Y6Y1 1673 aa27.39■■□□□ 1.97
SREBF1-220ENST00000581707 EP400Q96L91 3159 aa27.39■■□□□ 1.97
SREBF1-220ENST00000581707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.38■■□□□ 1.97
SREBF1-220ENST00000581707 LMO7Q8WWI1 1683 aa27.37■■□□□ 1.97
SREBF1-220ENST00000581707 ZBTB7CA1YPR0 619 aa27.37■■□□□ 1.97
SREBF1-220ENST00000581707 TMF1P82094 1093 aa27.36■■□□□ 1.97
SREBF1-220ENST00000581707 SPATA31A1Q5TZJ5 1347 aa27.36■■□□□ 1.97
SREBF1-220ENST00000581707 KRT27Q7Z3Y8 459 aa27.35■■□□□ 1.97
SREBF1-220ENST00000581707 KCNH5Q8NCM2 988 aa27.35■■□□□ 1.97
SREBF1-220ENST00000581707 NINLQ9Y2I6 1382 aa27.35■■□□□ 1.97
SREBF1-220ENST00000581707 A0A1W2PP64 1363 aa27.33■■□□□ 1.97
SREBF1-220ENST00000581707 AATKQ6ZMQ8 1374 aa27.33■■□□□ 1.97
SREBF1-220ENST00000581707 EDC4Q6P2E9 1401 aaKnown RBP27.33■■□□□ 1.96
SREBF1-220ENST00000581707 SOX12O15370 315 aa27.32■■□□□ 1.96
SREBF1-220ENST00000581707 LARP1Q6PKG0 1096 aaKnown RBP27.32■■□□□ 1.96
SREBF1-220ENST00000581707 CCDC125Q86Z20 511 aa27.32■■□□□ 1.96
SREBF1-220ENST00000581707 ZRANB1Q9UGI0 708 aa27.32■■□□□ 1.96
SREBF1-220ENST00000581707 NME9Q86XW9 330 aa27.31■■□□□ 1.96
SREBF1-220ENST00000581707 USP35Q9P2H5 1018 aa27.31■■□□□ 1.96
SREBF1-220ENST00000581707 ARHGEF25Q86VW2 580 aa27.3■■□□□ 1.96
SREBF1-220ENST00000581707 USP31Q70CQ4 1352 aa27.3■■□□□ 1.96
SREBF1-220ENST00000581707 COL5A2P05997 1499 aaPredicted RBP27.29■■□□□ 1.96
SREBF1-220ENST00000581707 CDCA8Q53HL2 280 aa27.28■■□□□ 1.96
SREBF1-220ENST00000581707 COL18A1P39060 1754 aa27.27■■□□□ 1.96
SREBF1-220ENST00000581707 THSD7AQ9UPZ6 1657 aa27.27■■□□□ 1.96
SREBF1-220ENST00000581707 BARGINQ6ZT62 677 aa27.26■■□□□ 1.95
SREBF1-220ENST00000581707 TCP11L2Q8N4U5 519 aa27.26■■□□□ 1.95
SREBF1-220ENST00000581707 USP54Q70EL1 1684 aa27.26■■□□□ 1.95
SREBF1-220ENST00000581707 NFAT5O94916 1531 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms