RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
SUPT4H1-207ENST00000581540 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
SUPT4H1-207ENST00000581540 CHRDL2Q6WN34 429 aa11.39□□□□□ -0.59
SUPT4H1-207ENST00000581540 SLF2Q8IX21 1173 aa11.39□□□□□ -0.59
SUPT4H1-207ENST00000581540 TMEM134Q9H6X4 195 aa11.39□□□□□ -0.59
SUPT4H1-207ENST00000581540 GRIN2BQ13224 1484 aa11.38□□□□□ -0.59
SUPT4H1-207ENST00000581540 ANKRD33BA6NCL7 494 aa11.38□□□□□ -0.59
SUPT4H1-207ENST00000581540 PCDHGA4Q9Y5G9 962 aa11.38□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L3A6NCW0 530 aa11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L4A6NCW7 530 aa11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L1Q7RTZ2 530 aa11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 NPAS4Q8IUM7 802 aa11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 PLEKHM2Q8IWE5 1019 aa11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 CLP1Q92989 425 aaKnown RBP11.37□□□□□ -0.59
SUPT4H1-207ENST00000581540 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
SUPT4H1-207ENST00000581540 NOM1Q5C9Z4 860 aaKnown RBP11.36□□□□□ -0.59
SUPT4H1-207ENST00000581540 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L10C9JJH3 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L12C9JPN9 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L21D6R901 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 EPS8L1Q8TE68 723 aa11.35□□□□□ -0.59
SUPT4H1-207ENST00000581540 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
SUPT4H1-207ENST00000581540 GCGRP47871 477 aa11.34□□□□□ -0.59
SUPT4H1-207ENST00000581540 SERPINB4P48594 390 aa11.34□□□□□ -0.59
SUPT4H1-207ENST00000581540 CLCN6P51797 869 aa11.34□□□□□ -0.59
SUPT4H1-207ENST00000581540 LARP1Q6PKG0 1096 aaKnown RBP11.34□□□□□ -0.59
SUPT4H1-207ENST00000581540 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
SUPT4H1-207ENST00000581540 FGD5Q6ZNL6 1462 aa11.33□□□□□ -0.6
SUPT4H1-207ENST00000581540 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
SUPT4H1-207ENST00000581540 NR1H3Q13133 447 aa11.33□□□□□ -0.6
SUPT4H1-207ENST00000581540 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.6
SUPT4H1-207ENST00000581540 USP17L5A8MUK1 530 aa11.32□□□□□ -0.6
SUPT4H1-207ENST00000581540 ATP2B4P23634 1241 aa11.32□□□□□ -0.6
SUPT4H1-207ENST00000581540 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
SUPT4H1-207ENST00000581540 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
SUPT4H1-207ENST00000581540 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
SUPT4H1-207ENST00000581540 KIF13AQ9H1H9 1805 aa11.31□□□□□ -0.6
SUPT4H1-207ENST00000581540 CFAP99D6REC4 459 aa11.31□□□□□ -0.6
SUPT4H1-207ENST00000581540 SKIP12755 728 aa11.31□□□□□ -0.6
SUPT4H1-207ENST00000581540 NR6A1Q15406 480 aa11.31□□□□□ -0.6
SUPT4H1-207ENST00000581540 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
SUPT4H1-207ENST00000581540 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
SUPT4H1-207ENST00000581540 NAALADL2Q58DX5 795 aa11.3□□□□□ -0.6
SUPT4H1-207ENST00000581540 CDCA7Q9BWT1 371 aaPredicted RBP11.3□□□□□ -0.6
SUPT4H1-207ENST00000581540 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
SUPT4H1-207ENST00000581540 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
SUPT4H1-207ENST00000581540 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
SUPT4H1-207ENST00000581540 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
SUPT4H1-207ENST00000581540 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
SUPT4H1-207ENST00000581540 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
SUPT4H1-207ENST00000581540 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 SEC24BO95487 1268 aa11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 ANKRD13AQ8IZ07 590 aa11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 C1orf216Q8TAB5 229 aa11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 EGFL7Q9UHF1 273 aa11.28□□□□□ -0.6
SUPT4H1-207ENST00000581540 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
SUPT4H1-207ENST00000581540 RASA1P20936 1047 aa11.27□□□□□ -0.61
SUPT4H1-207ENST00000581540 PTK7Q13308 1070 aa11.27□□□□□ -0.61
SUPT4H1-207ENST00000581540 MKRN1Q9UHC7 482 aaKnown RBP11.27□□□□□ -0.61
SUPT4H1-207ENST00000581540 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
SUPT4H1-207ENST00000581540 RECKO95980 971 aa11.26□□□□□ -0.61
SUPT4H1-207ENST00000581540 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
SUPT4H1-207ENST00000581540 FAM69CQ0P6D2 419 aa11.26□□□□□ -0.61
SUPT4H1-207ENST00000581540 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
SUPT4H1-207ENST00000581540 TATDN2Q93075 761 aa11.26□□□□□ -0.61
SUPT4H1-207ENST00000581540 FBXO33Q7Z6M2 555 aa11.25□□□□□ -0.61
SUPT4H1-207ENST00000581540 PACS2Q86VP3 889 aa11.25□□□□□ -0.61
SUPT4H1-207ENST00000581540 SLAIN2Q9P270 581 aa11.25□□□□□ -0.61
SUPT4H1-207ENST00000581540 CUX1P39880 1505 aa11.25□□□□□ -0.61
SUPT4H1-207ENST00000581540 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 ZBBXA8MT70 800 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 RNF135Q8IUD6 432 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 ANKMY2Q8IV38 441 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 TSKSQ9UJT2 592 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
SUPT4H1-207ENST00000581540 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
SUPT4H1-207ENST00000581540 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
SUPT4H1-207ENST00000581540 ERCC5P28715 1186 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 NUP160Q12769 1436 aa11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 COL19A1Q14993 1142 aa11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 TSNAXIP1Q2TAA8 658 aa11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 DEPDC4Q8N2C3 294 aa11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
SUPT4H1-207ENST00000581540 FBXO45P0C2W1 286 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms