RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 BRWD3Q6RI45 1802 aa15.5■□□□□ 0.07
RFFL-209ENST00000581265 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
RFFL-209ENST00000581265 TULP4Q9NRJ4 1543 aa15.48■□□□□ 0.07
RFFL-209ENST00000581265 NWD2Q9ULI1 1742 aa15.47■□□□□ 0.07
RFFL-209ENST00000581265 NUDT16Q96DE0 195 aaKnown RBP15.46■□□□□ 0.07
RFFL-209ENST00000581265 BTG4Q9NY30 223 aa15.46■□□□□ 0.07
RFFL-209ENST00000581265 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
RFFL-209ENST00000581265 TRPM3Q9HCF6 1732 aaPredicted RBP15.45■□□□□ 0.06
RFFL-209ENST00000581265 ABCA3Q99758 1704 aa15.44■□□□□ 0.06
RFFL-209ENST00000581265 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
RFFL-209ENST00000581265 PPP1R1BQ9UD71 204 aaPredicted RBP15.44■□□□□ 0.06
RFFL-209ENST00000581265 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
RFFL-209ENST00000581265 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
RFFL-209ENST00000581265 ALS2Q96Q42 1657 aa15.43■□□□□ 0.06
RFFL-209ENST00000581265 EZH2Q15910 746 aaKnown RBP15.42■□□□□ 0.06
RFFL-209ENST00000581265 CCDC61Q9Y6R9 512 aa15.42■□□□□ 0.06
RFFL-209ENST00000581265 FAM182BQ5T319 152 aa15.41■□□□□ 0.06
RFFL-209ENST00000581265 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
RFFL-209ENST00000581265 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
RFFL-209ENST00000581265 ATP7BP35670 1465 aa15.4■□□□□ 0.06
RFFL-209ENST00000581265 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
RFFL-209ENST00000581265 NBPF8Q3BBV2 869 aa15.4■□□□□ 0.06
RFFL-209ENST00000581265 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
RFFL-209ENST00000581265 COL14A1Q05707 1796 aaKnown RBP15.39■□□□□ 0.05
RFFL-209ENST00000581265 POLR3AO14802 1390 aaPredicted RBP15.39■□□□□ 0.05
RFFL-209ENST00000581265 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
RFFL-209ENST00000581265 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
RFFL-209ENST00000581265 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
RFFL-209ENST00000581265 ACEP12821 1306 aa15.38■□□□□ 0.05
RFFL-209ENST00000581265 RGPD1P0DJD0 1748 aa15.37■□□□□ 0.05
RFFL-209ENST00000581265 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
RFFL-209ENST00000581265 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
RFFL-209ENST00000581265 APBA3O96018 575 aa15.36■□□□□ 0.05
RFFL-209ENST00000581265 ITSN1Q15811 1721 aa15.35■□□□□ 0.05
RFFL-209ENST00000581265 KIAA1210Q9ULL0 1709 aa15.35■□□□□ 0.05
RFFL-209ENST00000581265 TRIM37O94972 964 aa15.35■□□□□ 0.05
RFFL-209ENST00000581265 ZC3H6P61129 1189 aaKnown RBP15.35■□□□□ 0.05
RFFL-209ENST00000581265 SPATA31A1Q5TZJ5 1347 aa15.35■□□□□ 0.05
RFFL-209ENST00000581265 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 SENP3-EIF4A1A0A087X0R7 540 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 CHRNA2Q15822 529 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 NUTM2GQ5VZR2 741 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 SPON1Q9HCB6 807 aa15.34■□□□□ 0.05
RFFL-209ENST00000581265 FAM196AQ6ZSG2 479 aa15.33■□□□□ 0.04
RFFL-209ENST00000581265 DISP2A7MBM2 1401 aa15.33■□□□□ 0.04
RFFL-209ENST00000581265 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
RFFL-209ENST00000581265 STRN4Q9NRL3 753 aa15.32■□□□□ 0.04
RFFL-209ENST00000581265 CENPJQ9HC77 1338 aaPredicted RBP15.32■□□□□ 0.04
RFFL-209ENST00000581265 EVA1CP58658 441 aa15.31■□□□□ 0.04
RFFL-209ENST00000581265 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
RFFL-209ENST00000581265 KCNQ2O43526 872 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 BRD4O60885 1362 aaPredicted RBP15.3■□□□□ 0.04
RFFL-209ENST00000581265 CPDO75976 1380 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 USP19O94966 1318 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 IFFO2Q5TF58 517 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 BARGINQ6ZT62 677 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 PARD3Q8TEW0 1356 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 CABP2Q9NPB3 220 aa15.3■□□□□ 0.04
RFFL-209ENST00000581265 TOPAZ1Q8N9V7 1692 aa15.29■□□□□ 0.04
RFFL-209ENST00000581265 THSD7AQ9UPZ6 1657 aa15.29■□□□□ 0.04
RFFL-209ENST00000581265 GCP02774 474 aa15.29■□□□□ 0.04
RFFL-209ENST00000581265 PPIP5K1Q6PFW1 1433 aa15.28■□□□□ 0.04
RFFL-209ENST00000581265 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
RFFL-209ENST00000581265 CABP1Q9NZU7 370 aa15.28■□□□□ 0.04
RFFL-209ENST00000581265 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
RFFL-209ENST00000581265 SSH2Q76I76 1423 aa15.27■□□□□ 0.04
RFFL-209ENST00000581265 LARP1Q6PKG0 1096 aaKnown RBP15.27■□□□□ 0.04
RFFL-209ENST00000581265 USP35Q9P2H5 1018 aa15.27■□□□□ 0.04
RFFL-209ENST00000581265 CAMTA1Q9Y6Y1 1673 aa15.26■□□□□ 0.03
RFFL-209ENST00000581265 PDE3BQ13370 1112 aa15.26■□□□□ 0.03
RFFL-209ENST00000581265 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
RFFL-209ENST00000581265 ZNF784Q8NCA9 323 aaPredicted RBP15.26■□□□□ 0.03
RFFL-209ENST00000581265 TNS1Q9HBL0 1735 aaKnown RBP15.26■□□□□ 0.03
RFFL-209ENST00000581265 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
RFFL-209ENST00000581265 NLRP6P59044 892 aa15.24■□□□□ 0.03
RFFL-209ENST00000581265 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
RFFL-209ENST00000581265 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
RFFL-209ENST00000581265 EVC2Q86UK5 1308 aa15.23■□□□□ 0.03
RFFL-209ENST00000581265 USP6P35125 1406 aa15.23■□□□□ 0.03
RFFL-209ENST00000581265 C1QTNF8P60827 252 aa15.22■□□□□ 0.03
RFFL-209ENST00000581265 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
RFFL-209ENST00000581265 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
RFFL-209ENST00000581265 AATKQ6ZMQ8 1374 aa15.21■□□□□ 0.02
RFFL-209ENST00000581265 C11orf95C9JLR9 678 aaPredicted RBP15.2■□□□□ 0.02
RFFL-209ENST00000581265 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
RFFL-209ENST00000581265 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
RFFL-209ENST00000581265 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
RFFL-209ENST00000581265 CRB1P82279 1406 aa15.18■□□□□ 0.02
RFFL-209ENST00000581265 ROCK2O75116 1388 aaKnown RBP15.18■□□□□ 0.02
RFFL-209ENST00000581265 SLIT3O75094 1523 aa15.17■□□□□ 0.02
RFFL-209ENST00000581265 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
RFFL-209ENST00000581265 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
RFFL-209ENST00000581265 ARHGEF25Q86VW2 580 aa15.16■□□□□ 0.02
RFFL-209ENST00000581265 KCNH5Q8NCM2 988 aa15.16■□□□□ 0.02
RFFL-209ENST00000581265 AXIN2Q9Y2T1 843 aa15.16■□□□□ 0.02
RFFL-209ENST00000581265 TRPM1Q7Z4N2 1603 aa15.16■□□□□ 0.02
RFFL-209ENST00000581265 RREB1Q92766 1687 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms