RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 LRP5O75197 1615 aa14.65□□□□□ -0.06
RFFL-208ENST00000581039 DLC1Q96QB1 1528 aa14.65□□□□□ -0.06
RFFL-208ENST00000581039 PRR36Q9H6K5 1346 aa14.64□□□□□ -0.07
RFFL-208ENST00000581039 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
RFFL-208ENST00000581039 ABCA3Q99758 1704 aa14.63□□□□□ -0.07
RFFL-208ENST00000581039 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
RFFL-208ENST00000581039 FAM196AQ6ZSG2 479 aa14.62□□□□□ -0.07
RFFL-208ENST00000581039 COL14A1Q05707 1796 aaKnown RBP14.62□□□□□ -0.07
RFFL-208ENST00000581039 TRIM37O94972 964 aa14.61□□□□□ -0.07
RFFL-208ENST00000581039 DCAF11Q8TEB1 546 aa14.61□□□□□ -0.07
RFFL-208ENST00000581039 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
RFFL-208ENST00000581039 SPATA31A1Q5TZJ5 1347 aa14.61□□□□□ -0.07
RFFL-208ENST00000581039 NRAPQ86VF7 1730 aa14.61□□□□□ -0.07
RFFL-208ENST00000581039 CHRNA2Q15822 529 aa14.6□□□□□ -0.07
RFFL-208ENST00000581039 ADGRB2O60241 1585 aa14.6□□□□□ -0.07
RFFL-208ENST00000581039 TRPM3Q9HCF6 1732 aaPredicted RBP14.59□□□□□ -0.07
RFFL-208ENST00000581039 APBA3O96018 575 aa14.59□□□□□ -0.07
RFFL-208ENST00000581039 EVA1CP58658 441 aa14.59□□□□□ -0.07
RFFL-208ENST00000581039 NUDT16Q96DE0 195 aaKnown RBP14.59□□□□□ -0.07
RFFL-208ENST00000581039 STAC3Q96MF2 364 aa14.59□□□□□ -0.07
RFFL-208ENST00000581039 CAMKK2Q96RR4 588 aa14.59□□□□□ -0.07
RFFL-208ENST00000581039 KIAA0232Q92628 1395 aa14.59□□□□□ -0.07
RFFL-208ENST00000581039 DISP2A7MBM2 1401 aa14.58□□□□□ -0.07
RFFL-208ENST00000581039 TULP4Q9NRJ4 1543 aa14.58□□□□□ -0.08
RFFL-208ENST00000581039 ZC3H6P61129 1189 aaKnown RBP14.58□□□□□ -0.08
RFFL-208ENST00000581039 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
RFFL-208ENST00000581039 ADGRB1O14514 1584 aa14.58□□□□□ -0.08
RFFL-208ENST00000581039 ALS2Q96Q42 1657 aa14.58□□□□□ -0.08
RFFL-208ENST00000581039 RGPD1P0DJD0 1748 aa14.58□□□□□ -0.08
RFFL-208ENST00000581039 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
RFFL-208ENST00000581039 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
RFFL-208ENST00000581039 NBPF8Q3BBV2 869 aa14.55□□□□□ -0.08
RFFL-208ENST00000581039 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
RFFL-208ENST00000581039 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
RFFL-208ENST00000581039 CDK19Q9BWU1 502 aa14.55□□□□□ -0.08
RFFL-208ENST00000581039 PARD3Q8TEW0 1356 aa14.55□□□□□ -0.08
RFFL-208ENST00000581039 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
RFFL-208ENST00000581039 RAB3GAP2Q9H2M9 1393 aa14.53□□□□□ -0.08
RFFL-208ENST00000581039 ACEP12821 1306 aa14.52□□□□□ -0.08
RFFL-208ENST00000581039 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.09
RFFL-208ENST00000581039 TCP11L2Q8N4U5 519 aa14.52□□□□□ -0.09
RFFL-208ENST00000581039 ABTB2Q8N961 1025 aa14.52□□□□□ -0.09
RFFL-208ENST00000581039 CCDC61Q9Y6R9 512 aa14.52□□□□□ -0.09
RFFL-208ENST00000581039 ATP7BP35670 1465 aa14.5□□□□□ -0.09
RFFL-208ENST00000581039 SSH2Q76I76 1423 aa14.5□□□□□ -0.09
RFFL-208ENST00000581039 PLEKHG3A1L390 1219 aa14.5□□□□□ -0.09
RFFL-208ENST00000581039 TNS1Q9HBL0 1735 aaKnown RBP14.49□□□□□ -0.09
RFFL-208ENST00000581039 CRYBG1Q9Y4K1 1723 aa14.49□□□□□ -0.09
RFFL-208ENST00000581039 POLR3AO14802 1390 aaPredicted RBP14.49□□□□□ -0.09
RFFL-208ENST00000581039 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
RFFL-208ENST00000581039 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
RFFL-208ENST00000581039 C11orf95C9JLR9 678 aaPredicted RBP14.48□□□□□ -0.09
RFFL-208ENST00000581039 YY1P25490 414 aa14.48□□□□□ -0.09
RFFL-208ENST00000581039 NLRP13Q86W25 1043 aa14.48□□□□□ -0.09
RFFL-208ENST00000581039 PPP1R1BQ9UD71 204 aaPredicted RBP14.48□□□□□ -0.09
RFFL-208ENST00000581039 GCP02774 474 aa14.47□□□□□ -0.09
RFFL-208ENST00000581039 SPON1Q9HCB6 807 aa14.47□□□□□ -0.09
RFFL-208ENST00000581039 CPDO75976 1380 aa14.47□□□□□ -0.09
RFFL-208ENST00000581039 ITSN1Q15811 1721 aa14.46□□□□□ -0.1
RFFL-208ENST00000581039 CAMTA1Q9Y6Y1 1673 aa14.46□□□□□ -0.1
RFFL-208ENST00000581039 KCNQ2O43526 872 aa14.45□□□□□ -0.1
RFFL-208ENST00000581039 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
RFFL-208ENST00000581039 USP19O94966 1318 aa14.44□□□□□ -0.1
RFFL-208ENST00000581039 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
RFFL-208ENST00000581039 PHRF1Q9P1Y6 1649 aaKnown RBP14.44□□□□□ -0.1
RFFL-208ENST00000581039 ARHGEF28Q8N1W1 1705 aaKnown RBP14.42□□□□□ -0.1
RFFL-208ENST00000581039 PLSCR1O15162 318 aa14.41□□□□□ -0.1
RFFL-208ENST00000581039 NLRP6P59044 892 aa14.41□□□□□ -0.1
RFFL-208ENST00000581039 DDB1Q16531 1140 aa14.41□□□□□ -0.1
RFFL-208ENST00000581039 NBPF1Q3BBV0 1214 aa14.41□□□□□ -0.1
RFFL-208ENST00000581039 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
RFFL-208ENST00000581039 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
RFFL-208ENST00000581039 NRKQ7Z2Y5 1582 aa14.4□□□□□ -0.1
RFFL-208ENST00000581039 TOM1L2Q6ZVM7 507 aa14.4□□□□□ -0.1
RFFL-208ENST00000581039 CRB1P82279 1406 aa14.4□□□□□ -0.1
RFFL-208ENST00000581039 RREB1Q92766 1687 aa14.39□□□□□ -0.11
RFFL-208ENST00000581039 COL5A2P05997 1499 aaPredicted RBP14.39□□□□□ -0.11
RFFL-208ENST00000581039 BRD4O60885 1362 aaPredicted RBP14.39□□□□□ -0.11
RFFL-208ENST00000581039 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
RFFL-208ENST00000581039 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
RFFL-208ENST00000581039 OVOS2A0A0G2JMS6 1433 aa14.39□□□□□ -0.11
RFFL-208ENST00000581039 OVOS2A0A0J9YW53 1432 aa14.39□□□□□ -0.11
RFFL-208ENST00000581039 OVOS2Q6IE36 1432 aa14.39□□□□□ -0.11
RFFL-208ENST00000581039 CENPJQ9HC77 1338 aaPredicted RBP14.39□□□□□ -0.11
RFFL-208ENST00000581039 NUP188Q5SRE5 1749 aa14.38□□□□□ -0.11
RFFL-208ENST00000581039 AATKQ6ZMQ8 1374 aa14.38□□□□□ -0.11
RFFL-208ENST00000581039 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
RFFL-208ENST00000581039 LMO7Q8WWI1 1683 aa14.38□□□□□ -0.11
RFFL-208ENST00000581039 TOPAZ1Q8N9V7 1692 aa14.37□□□□□ -0.11
RFFL-208ENST00000581039 CDCA7Q9BWT1 371 aaPredicted RBP14.37□□□□□ -0.11
RFFL-208ENST00000581039 PTF1AQ7RTS3 328 aa14.35□□□□□ -0.11
RFFL-208ENST00000581039 PARP4Q9UKK3 1724 aaKnown RBP14.35□□□□□ -0.11
RFFL-208ENST00000581039 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
RFFL-208ENST00000581039 PROM2Q8N271 834 aa14.34□□□□□ -0.11
RFFL-208ENST00000581039 MARCH10Q8NA82 808 aaPredicted RBP14.34□□□□□ -0.11
RFFL-208ENST00000581039 ANO8Q9HCE9 1232 aaPredicted RBP14.34□□□□□ -0.11
RFFL-208ENST00000581039 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
RFFL-208ENST00000581039 WDR17Q8IZU2 1322 aa14.34□□□□□ -0.11
RFFL-208ENST00000581039 USP6P35125 1406 aa14.33□□□□□ -0.11
RFFL-208ENST00000581039 ZBTB7AO95365 584 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms