RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 BCL9LQ86UU0 1499 aa38.18■■■■□ 3.7
LINC00271-207ENST00000580741 TRPC5Q9UL62 973 aaPredicted RBP38.17■■■■□ 3.7
LINC00271-207ENST00000580741 ATRNO75882 1429 aa38.15■■■■□ 3.7
LINC00271-207ENST00000580741 CDK12Q9NYV4 1490 aaPredicted RBP38.14■■■■□ 3.7
LINC00271-207ENST00000580741 CABP1Q9NZU7 370 aa38.12■■■■□ 3.69
LINC00271-207ENST00000580741 SLIT2O94813 1529 aa38.12■■■■□ 3.69
LINC00271-207ENST00000580741 RGS12O14924 1447 aa38.12■■■■□ 3.69
LINC00271-207ENST00000580741 NUTM2GQ5VZR2 741 aa38.1■■■■□ 3.69
LINC00271-207ENST00000580741 UNC5CLQ8IV45 518 aa38.07■■■■□ 3.68
LINC00271-207ENST00000580741 FAM83GA6ND36 823 aa38.05■■■■□ 3.68
LINC00271-207ENST00000580741 CRYBG1Q9Y4K1 1723 aa38.04■■■■□ 3.68
LINC00271-207ENST00000580741 SBNO2Q9Y2G9 1366 aa38.03■■■■□ 3.68
LINC00271-207ENST00000580741 PLCH1Q4KWH8 1693 aa38.02■■■■□ 3.68
LINC00271-207ENST00000580741 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.02■■■■□ 3.68
LINC00271-207ENST00000580741 ABTB2Q8N961 1025 aa38■■■■□ 3.67
LINC00271-207ENST00000580741 CLSPNQ9HAW4 1339 aa38■■■■□ 3.67
LINC00271-207ENST00000580741 GJD4Q96KN9 370 aaPredicted RBP37.99■■■■□ 3.67
LINC00271-207ENST00000580741 USP6P35125 1406 aa37.98■■■■□ 3.67
LINC00271-207ENST00000580741 ATAD2Q6PL18 1390 aa37.97■■■■□ 3.67
LINC00271-207ENST00000580741 PHRF1Q9P1Y6 1649 aaKnown RBP37.95■■■■□ 3.67
LINC00271-207ENST00000580741 NWD2Q9ULI1 1742 aa37.95■■■■□ 3.67
LINC00271-207ENST00000580741 PRDM11Q9NQV5 511 aa37.93■■■■□ 3.66
LINC00271-207ENST00000580741 BTG4Q9NY30 223 aa37.93■■■■□ 3.66
LINC00271-207ENST00000580741 GLI3P10071 1580 aa37.93■■■■□ 3.66
LINC00271-207ENST00000580741 ST20-MTHFSA0A0A6YYL1 179 aa37.92■■■■□ 3.66
LINC00271-207ENST00000580741 CCER1Q8TC90 406 aaPredicted RBP37.92■■■■□ 3.66
LINC00271-207ENST00000580741 KIAA0232Q92628 1395 aa37.92■■■■□ 3.66
LINC00271-207ENST00000580741 COL14A1Q05707 1796 aaKnown RBP37.91■■■■□ 3.66
LINC00271-207ENST00000580741 ZC3H6P61129 1189 aaKnown RBP37.91■■■■□ 3.66
LINC00271-207ENST00000580741 VPS72Q15906 364 aa37.91■■■■□ 3.66
LINC00271-207ENST00000580741 CCDC9Q9Y3X0 531 aaKnown RBP37.91■■■■□ 3.66
LINC00271-207ENST00000580741 BRD4O60885 1362 aaPredicted RBP37.9■■■■□ 3.66
LINC00271-207ENST00000580741 UPF1Q92900 1129 aaKnown RBP eCLIP37.89■■■■□ 3.66
LINC00271-207ENST00000580741 USP19O94966 1318 aa37.88■■■■□ 3.66
LINC00271-207ENST00000580741 SSH2Q76I76 1423 aa37.88■■■■□ 3.66
LINC00271-207ENST00000580741 CHRNA2Q15822 529 aa37.88■■■■□ 3.65
LINC00271-207ENST00000580741 NRAPQ86VF7 1730 aa37.87■■■■□ 3.65
LINC00271-207ENST00000580741 NLRP13Q86W25 1043 aa37.87■■■■□ 3.65
LINC00271-207ENST00000580741 TESK2Q96S53 571 aa37.87■■■■□ 3.65
LINC00271-207ENST00000580741 TIMELESSQ9UNS1 1208 aa37.87■■■■□ 3.65
LINC00271-207ENST00000580741 NRKQ7Z2Y5 1582 aa37.86■■■■□ 3.65
LINC00271-207ENST00000580741 TMC1Q8TDI8 760 aa37.84■■■■□ 3.65
LINC00271-207ENST00000580741 ZNF692Q9BU19 519 aaPredicted RBP37.84■■■■□ 3.65
LINC00271-207ENST00000580741 CPSF1Q10570 1443 aaKnown RBP37.84■■■■□ 3.65
LINC00271-207ENST00000580741 AKAP12Q02952 1782 aa37.83■■■■□ 3.65
LINC00271-207ENST00000580741 USP47Q96K76 1375 aa37.83■■■■□ 3.65
LINC00271-207ENST00000580741 NLRP6P59044 892 aa37.83■■■■□ 3.65
LINC00271-207ENST00000580741 TTC21BQ7Z4L5 1316 aa37.82■■■■□ 3.64
LINC00271-207ENST00000580741 KTN1Q86UP2 1357 aaKnown RBP37.8■■■■□ 3.64
LINC00271-207ENST00000580741 PIK3C2AO00443 1686 aa37.8■■■■□ 3.64
LINC00271-207ENST00000580741 GCP02774 474 aa37.8■■■■□ 3.64
LINC00271-207ENST00000580741 SLC12A5Q9H2X9 1139 aa37.78■■■■□ 3.64
LINC00271-207ENST00000580741 CD163L1Q9NR16 1453 aa37.77■■■■□ 3.64
LINC00271-207ENST00000580741 CPDO75976 1380 aa37.74■■■■□ 3.63
LINC00271-207ENST00000580741 SEPT12Q8IYM1 358 aa37.74■■■■□ 3.63
LINC00271-207ENST00000580741 STRN4Q9NRL3 753 aa37.74■■■■□ 3.63
LINC00271-207ENST00000580741 SLIT3O75094 1523 aa37.73■■■■□ 3.63
LINC00271-207ENST00000580741 TTC21AQ8NDW8 1320 aa37.73■■■■□ 3.63
LINC00271-207ENST00000580741 MON2Q7Z3U7 1717 aa37.73■■■■□ 3.63
LINC00271-207ENST00000580741 ZBTB7CA1YPR0 619 aa37.72■■■■□ 3.63
LINC00271-207ENST00000580741 PUS7Q96PZ0 661 aaKnown RBP37.72■■■■□ 3.63
LINC00271-207ENST00000580741 FAM98CQ17RN3 349 aaKnown RBP37.71■■■■□ 3.63
LINC00271-207ENST00000580741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.71■■■■□ 3.63
LINC00271-207ENST00000580741 SPATA31A5Q5VU36 1347 aa37.7■■■■□ 3.63
LINC00271-207ENST00000580741 SPATA31A7Q8IWB4 1347 aa37.7■■■■□ 3.63
LINC00271-207ENST00000580741 HDGFL2Q7Z4V5 671 aaPredicted RBP37.7■■■■□ 3.63
LINC00271-207ENST00000580741 A0A0G2JS52 829 aa37.68■■■■□ 3.62
LINC00271-207ENST00000580741 MYT1Q01538 1121 aa37.68■■■■□ 3.62
LINC00271-207ENST00000580741 CAMTA1Q9Y6Y1 1673 aa37.68■■■■□ 3.62
LINC00271-207ENST00000580741 SOX12O15370 315 aa37.67■■■■□ 3.62
LINC00271-207ENST00000580741 ONECUT3O60422 494 aaPredicted RBP37.67■■■■□ 3.62
LINC00271-207ENST00000580741 A0A1W2PP64 1363 aa37.67■■■■□ 3.62
LINC00271-207ENST00000580741 ZRANB1Q9UGI0 708 aa37.66■■■■□ 3.62
LINC00271-207ENST00000580741 LMO7Q8WWI1 1683 aa37.66■■■■□ 3.62
LINC00271-207ENST00000580741 SLC24A1O60721 1099 aa37.65■■■■□ 3.62
LINC00271-207ENST00000580741 EVA1CP58658 441 aa37.65■■■■□ 3.62
LINC00271-207ENST00000580741 BRWD3Q6RI45 1802 aa37.65■■■■□ 3.62
LINC00271-207ENST00000580741 TMF1P82094 1093 aa37.64■■■■□ 3.62
LINC00271-207ENST00000580741 TERF2IPQ9NYB0 399 aa37.64■■■■□ 3.62
LINC00271-207ENST00000580741 EP400Q96L91 3159 aa37.64■■■■□ 3.62
LINC00271-207ENST00000580741 NME9Q86XW9 330 aa37.63■■■■□ 3.61
LINC00271-207ENST00000580741 SPATA31A1Q5TZJ5 1347 aa37.61■■■■□ 3.61
LINC00271-207ENST00000580741 LARP1Q6PKG0 1096 aaKnown RBP37.6■■■■□ 3.61
LINC00271-207ENST00000580741 EDC4Q6P2E9 1401 aaKnown RBP37.6■■■■□ 3.61
LINC00271-207ENST00000580741 NINLQ9Y2I6 1382 aa37.59■■■■□ 3.61
LINC00271-207ENST00000580741 USP35Q9P2H5 1018 aa37.59■■■■□ 3.61
LINC00271-207ENST00000580741 KRT27Q7Z3Y8 459 aa37.57■■■■□ 3.6
LINC00271-207ENST00000580741 KCNH5Q8NCM2 988 aa37.57■■■■□ 3.6
LINC00271-207ENST00000580741 AATKQ6ZMQ8 1374 aa37.56■■■■□ 3.6
LINC00271-207ENST00000580741 COL5A2P05997 1499 aaPredicted RBP37.56■■■■□ 3.6
LINC00271-207ENST00000580741 USP31Q70CQ4 1352 aa37.55■■■■□ 3.6
LINC00271-207ENST00000580741 ARHGEF25Q86VW2 580 aa37.54■■■■□ 3.6
LINC00271-207ENST00000580741 NFAT5O94916 1531 aa37.54■■■■□ 3.6
LINC00271-207ENST00000580741 THSD7AQ9UPZ6 1657 aa37.52■■■■□ 3.6
LINC00271-207ENST00000580741 AXIN2Q9Y2T1 843 aa37.51■■■■□ 3.6
LINC00271-207ENST00000580741 COL18A1P39060 1754 aa37.5■■■■□ 3.59
LINC00271-207ENST00000580741 ANKRD36BQ8N2N9 1353 aa37.49■■■■□ 3.59
LINC00271-207ENST00000580741 USP54Q70EL1 1684 aa37.48■■■■□ 3.59
LINC00271-207ENST00000580741 CDCA8Q53HL2 280 aa37.47■■■■□ 3.59
LINC00271-207ENST00000580741 FAM182BQ5T319 152 aa37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms