RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 RBM26Q5T8P6 1007 aaKnown RBP10.28□□□□□ -0.76
RNF43-204ENST00000580014 CFAP65Q6ZU64 1925 aaKnown RBP10.28□□□□□ -0.76
RNF43-204ENST00000580014 NRXN1Q9ULB1 1477 aa10.28□□□□□ -0.76
RNF43-204ENST00000580014 TONSLQ96HA7 1378 aa10.27□□□□□ -0.76
RNF43-204ENST00000580014 UBR1Q8IWV7 1749 aa10.27□□□□□ -0.76
RNF43-204ENST00000580014 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
RNF43-204ENST00000580014 RGL3Q3MIN7 710 aa10.27□□□□□ -0.77
RNF43-204ENST00000580014 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
RNF43-204ENST00000580014 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
RNF43-204ENST00000580014 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.27□□□□□ -0.77
RNF43-204ENST00000580014 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
RNF43-204ENST00000580014 COLQQ9Y215 455 aaPredicted RBP10.27□□□□□ -0.77
RNF43-204ENST00000580014 MYOM2P54296 1465 aa10.27□□□□□ -0.77
RNF43-204ENST00000580014 NEXMIFQ5QGS0 1516 aa10.27□□□□□ -0.77
RNF43-204ENST00000580014 RIMS2Q9UQ26 1411 aa10.26□□□□□ -0.77
RNF43-204ENST00000580014 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
RNF43-204ENST00000580014 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
RNF43-204ENST00000580014 KIF1BO60333 1816 aa10.26□□□□□ -0.77
RNF43-204ENST00000580014 LMTK3Q96Q04 1460 aa10.25□□□□□ -0.77
RNF43-204ENST00000580014 DCAF11Q8TEB1 546 aa10.25□□□□□ -0.77
RNF43-204ENST00000580014 LTKP29376 864 aa10.24□□□□□ -0.77
RNF43-204ENST00000580014 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
RNF43-204ENST00000580014 ZNF326Q5BKZ1 582 aaKnown RBP10.24□□□□□ -0.77
RNF43-204ENST00000580014 ADGRF5Q8IZF2 1346 aa10.24□□□□□ -0.77
RNF43-204ENST00000580014 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
RNF43-204ENST00000580014 C7P10643 843 aa10.23□□□□□ -0.77
RNF43-204ENST00000580014 NBPF8Q3BBV2 869 aa10.23□□□□□ -0.77
RNF43-204ENST00000580014 PLEKHG1Q9ULL1 1385 aa10.23□□□□□ -0.77
RNF43-204ENST00000580014 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
RNF43-204ENST00000580014 MED14O60244 1454 aa10.23□□□□□ -0.77
RNF43-204ENST00000580014 IFT172Q9UG01 1749 aa10.22□□□□□ -0.77
RNF43-204ENST00000580014 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
RNF43-204ENST00000580014 TXNDC2Q86VQ3 553 aa10.22□□□□□ -0.77
RNF43-204ENST00000580014 ANKLE2Q86XL3 938 aa10.22□□□□□ -0.77
RNF43-204ENST00000580014 C14orf93Q9H972 538 aaKnown RBP10.22□□□□□ -0.77
RNF43-204ENST00000580014 PPLO60437 1756 aa10.21□□□□□ -0.77
RNF43-204ENST00000580014 NEUROD2Q15784 382 aa10.21□□□□□ -0.77
RNF43-204ENST00000580014 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
RNF43-204ENST00000580014 EID1Q9Y6B2 187 aa10.21□□□□□ -0.77
RNF43-204ENST00000580014 GPRASP1Q5JY77 1395 aa10.21□□□□□ -0.78
RNF43-204ENST00000580014 SCAF11Q99590 1463 aaKnown RBP10.21□□□□□ -0.78
RNF43-204ENST00000580014 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
RNF43-204ENST00000580014 SETBP1Q9Y6X0 1596 aa10.2□□□□□ -0.78
RNF43-204ENST00000580014 MYO5BQ9ULV0 1848 aa10.19□□□□□ -0.78
RNF43-204ENST00000580014 ADAMTS13Q76LX8 1427 aa10.19□□□□□ -0.78
RNF43-204ENST00000580014 UPF1Q92900 1129 aaKnown RBP eCLIP10.19□□□□□ -0.78
RNF43-204ENST00000580014 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
RNF43-204ENST00000580014 TBX22Q9Y458 520 aa10.19□□□□□ -0.78
RNF43-204ENST00000580014 RALGAPBQ86X10 1494 aa10.18□□□□□ -0.78
RNF43-204ENST00000580014 HSPA2P54652 639 aa10.18□□□□□ -0.78
RNF43-204ENST00000580014 AK7Q96M32 723 aa10.18□□□□□ -0.78
RNF43-204ENST00000580014 CFAP70Q5T0N1 1121 aa10.17□□□□□ -0.78
RNF43-204ENST00000580014 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
RNF43-204ENST00000580014 NRXN3Q9Y4C0 1643 aa10.17□□□□□ -0.78
RNF43-204ENST00000580014 NPHP4O75161 1426 aaPredicted RBP10.16□□□□□ -0.78
RNF43-204ENST00000580014 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
RNF43-204ENST00000580014 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
RNF43-204ENST00000580014 PTGER2P43116 358 aa10.16□□□□□ -0.78
RNF43-204ENST00000580014 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
RNF43-204ENST00000580014 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
RNF43-204ENST00000580014 ADGRB1O14514 1584 aa10.16□□□□□ -0.78
RNF43-204ENST00000580014 PIK3R4Q99570 1358 aa10.15□□□□□ -0.78
RNF43-204ENST00000580014 ALKQ9UM73 1620 aa10.15□□□□□ -0.78
RNF43-204ENST00000580014 GPR37O15354 613 aa10.15□□□□□ -0.78
RNF43-204ENST00000580014 TBC1D12O60347 775 aa10.15□□□□□ -0.78
RNF43-204ENST00000580014 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
RNF43-204ENST00000580014 NBPF1Q3BBV0 1214 aa10.15□□□□□ -0.78
RNF43-204ENST00000580014 DIP2AQ14689 1571 aa10.14□□□□□ -0.79
RNF43-204ENST00000580014 SIRT1Q96EB6 747 aa10.14□□□□□ -0.79
RNF43-204ENST00000580014 TRPM1Q7Z4N2 1603 aa10.14□□□□□ -0.79
RNF43-204ENST00000580014 METP08581 1390 aa10.14□□□□□ -0.79
RNF43-204ENST00000580014 ABCC11Q96J66 1382 aa10.14□□□□□ -0.79
RNF43-204ENST00000580014 ASXL1Q8IXJ9 1541 aa10.13□□□□□ -0.79
RNF43-204ENST00000580014 OSBPP22059 807 aa10.13□□□□□ -0.79
RNF43-204ENST00000580014 LAMC1P11047 1609 aa10.13□□□□□ -0.79
RNF43-204ENST00000580014 TECPR2O15040 1411 aa10.13□□□□□ -0.79
RNF43-204ENST00000580014 SETD1AO15047 1707 aaKnown RBP10.13□□□□□ -0.79
RNF43-204ENST00000580014 LRPPRCP42704 1394 aaKnown RBP10.13□□□□□ -0.79
RNF43-204ENST00000580014 STRCQ7RTU9 1775 aa10.12□□□□□ -0.79
RNF43-204ENST00000580014 PTCD2Q8WV60 388 aaKnown RBP10.12□□□□□ -0.79
RNF43-204ENST00000580014 SLC26A8Q96RN1 970 aa10.12□□□□□ -0.79
RNF43-204ENST00000580014 ROCK2O75116 1388 aaKnown RBP10.12□□□□□ -0.79
RNF43-204ENST00000580014 PTPRUQ92729 1446 aa10.11□□□□□ -0.79
RNF43-204ENST00000580014 EVI5O60447 810 aa10.11□□□□□ -0.79
RNF43-204ENST00000580014 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
RNF43-204ENST00000580014 POLR1AO95602 1720 aaPredicted RBP10.1□□□□□ -0.79
RNF43-204ENST00000580014 YTHDC2Q9H6S0 1430 aaKnown RBP10.1□□□□□ -0.79
RNF43-204ENST00000580014 IQGAP1P46940 1657 aa10.1□□□□□ -0.79
RNF43-204ENST00000580014 NUTM2FA1L443 756 aa10.1□□□□□ -0.79
RNF43-204ENST00000580014 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
RNF43-204ENST00000580014 SLC34A2O95436 690 aa10.1□□□□□ -0.79
RNF43-204ENST00000580014 DDX12PQ92771 950 aa10.1□□□□□ -0.79
RNF43-204ENST00000580014 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
RNF43-204ENST00000580014 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
RNF43-204ENST00000580014 KCNA6P17658 529 aa10.09□□□□□ -0.79
RNF43-204ENST00000580014 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
RNF43-204ENST00000580014 TRIM66O15016 1216 aa10.08□□□□□ -0.8
RNF43-204ENST00000580014 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
RNF43-204ENST00000580014 SP7Q8TDD2 431 aaPredicted RBP10.08□□□□□ -0.8
RNF43-204ENST00000580014 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms