RNA–Protein interactions for RNA: ENST00000579986.6

RTTN-204, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-204ENST00000579986 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
RTTN-204ENST00000579986 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
RTTN-204ENST00000579986 TMC1Q8TDI8 760 aa8.67□□□□□ -1.02
RTTN-204ENST00000579986 C1orf167Q5SNV9 1468 aa8.67□□□□□ -1.02
RTTN-204ENST00000579986 TMEM94Q12767 1356 aa8.67□□□□□ -1.02
RTTN-204ENST00000579986 TTC21AQ8NDW8 1320 aa8.67□□□□□ -1.02
RTTN-204ENST00000579986 CC2D1BQ5T0F9 858 aaKnown RBP8.67□□□□□ -1.02
RTTN-204ENST00000579986 ACEP12821 1306 aa8.66□□□□□ -1.02
RTTN-204ENST00000579986 DMRT2Q9Y5R5 561 aa8.66□□□□□ -1.02
RTTN-204ENST00000579986 RGPD1P0DJD0 1748 aa8.66□□□□□ -1.02
RTTN-204ENST00000579986 C19orf44Q9H6X5 657 aa8.66□□□□□ -1.02
RTTN-204ENST00000579986 SLIT3O75094 1523 aa8.66□□□□□ -1.02
RTTN-204ENST00000579986 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
RTTN-204ENST00000579986 MAP2P11137 1827 aaKnown RBP8.65□□□□□ -1.02
RTTN-204ENST00000579986 CDK12Q9NYV4 1490 aaPredicted RBP8.65□□□□□ -1.02
RTTN-204ENST00000579986 PEAK1Q9H792 1746 aa8.65□□□□□ -1.02
RTTN-204ENST00000579986 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.02
RTTN-204ENST00000579986 MED1Q15648 1581 aaPredicted RBP8.65□□□□□ -1.02
RTTN-204ENST00000579986 TTC21BQ7Z4L5 1316 aa8.65□□□□□ -1.03
RTTN-204ENST00000579986 NFAT5O94916 1531 aa8.64□□□□□ -1.03
RTTN-204ENST00000579986 PXDNQ92626 1479 aa8.63□□□□□ -1.03
RTTN-204ENST00000579986 MORC1Q86VD1 984 aa8.63□□□□□ -1.03
RTTN-204ENST00000579986 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
RTTN-204ENST00000579986 IQSEC2Q5JU85 1478 aa8.63□□□□□ -1.03
RTTN-204ENST00000579986 NCBP3Q53F19 620 aaKnown RBP8.62□□□□□ -1.03
RTTN-204ENST00000579986 KIF24Q5T7B8 1368 aa8.62□□□□□ -1.03
RTTN-204ENST00000579986 ABCC6O95255 1503 aa8.62□□□□□ -1.03
RTTN-204ENST00000579986 PHF8Q9UPP1 1060 aa8.62□□□□□ -1.03
RTTN-204ENST00000579986 ZBED9Q6R2W3 1325 aa8.61□□□□□ -1.03
RTTN-204ENST00000579986 ZNF335Q9H4Z2 1342 aaPredicted RBP8.61□□□□□ -1.03
RTTN-204ENST00000579986 CAMTA1Q9Y6Y1 1673 aa8.61□□□□□ -1.03
RTTN-204ENST00000579986 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
RTTN-204ENST00000579986 MSH6P52701 1360 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 NME9Q86XW9 330 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 LTN1O94822 1766 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 POLKQ9UBT6 870 aa8.6□□□□□ -1.03
RTTN-204ENST00000579986 AHDC1Q5TGY3 1603 aaPredicted RBP8.6□□□□□ -1.03
RTTN-204ENST00000579986 USP19O94966 1318 aa8.59□□□□□ -1.03
RTTN-204ENST00000579986 LMO7Q8WWI1 1683 aa8.59□□□□□ -1.03
RTTN-204ENST00000579986 COL18A1P39060 1754 aa8.58□□□□□ -1.04
RTTN-204ENST00000579986 MTHFSP49914 203 aa8.58□□□□□ -1.04
RTTN-204ENST00000579986 COL22A1Q8NFW1 1626 aaPredicted RBP8.58□□□□□ -1.04
RTTN-204ENST00000579986 RTL1A6NKG5 1358 aa8.58□□□□□ -1.04
RTTN-204ENST00000579986 RBM33Q96EV2 1170 aaKnown RBP8.57□□□□□ -1.04
RTTN-204ENST00000579986 COG3Q96JB2 828 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 ZNF521Q96K83 1311 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 ORAI2Q96SN7 254 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.57□□□□□ -1.04
RTTN-204ENST00000579986 NGEFQ8N5V2 710 aa8.57□□□□□ -1.04
RTTN-204ENST00000579986 CENPBP07199 599 aaPredicted RBP8.56□□□□□ -1.04
RTTN-204ENST00000579986 NGDNQ8NEJ9 315 aaKnown RBP8.56□□□□□ -1.04
RTTN-204ENST00000579986 TNS3Q68CZ2 1445 aa8.56□□□□□ -1.04
RTTN-204ENST00000579986 ATF3P18847 181 aa8.56□□□□□ -1.04
RTTN-204ENST00000579986 FAM9BQ8IZU0 186 aa8.56□□□□□ -1.04
RTTN-204ENST00000579986 SOS2Q07890 1332 aaPredicted RBP8.55□□□□□ -1.04
RTTN-204ENST00000579986 IL13P35225 146 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 ESCO1Q5FWF5 840 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 PLEKHF1Q96S99 279 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 ROBO1Q9Y6N7 1651 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 FAM208AQ9UK61 1670 aaKnown RBP8.55□□□□□ -1.04
RTTN-204ENST00000579986 BRINP3Q76B58 766 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 CFAP53Q96M91 514 aa8.55□□□□□ -1.04
RTTN-204ENST00000579986 FLT4P35916 1363 aa8.54□□□□□ -1.04
RTTN-204ENST00000579986 NPHP3Q7Z494 1330 aa8.53□□□□□ -1.04
RTTN-204ENST00000579986 YTHDC1Q96MU7 727 aaKnown RBP8.53□□□□□ -1.04
RTTN-204ENST00000579986 SLAIN2Q9P270 581 aa8.53□□□□□ -1.04
RTTN-204ENST00000579986 KDRP35968 1356 aa8.53□□□□□ -1.04
RTTN-204ENST00000579986 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
RTTN-204ENST00000579986 PLEKHG2Q9H7P9 1386 aa8.53□□□□□ -1.04
RTTN-204ENST00000579986 SPATA31A3Q5VYP0 1347 aa8.53□□□□□ -1.04
RTTN-204ENST00000579986 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.04
RTTN-204ENST00000579986 PSME1Q06323 249 aa8.52□□□□□ -1.04
RTTN-204ENST00000579986 PDE3BQ13370 1112 aa8.52□□□□□ -1.04
RTTN-204ENST00000579986 KRT28Q7Z3Y7 464 aa8.52□□□□□ -1.04
RTTN-204ENST00000579986 ARHGEF10O15013 1369 aa8.52□□□□□ -1.04
RTTN-204ENST00000579986 CPDO75976 1380 aa8.52□□□□□ -1.04
RTTN-204ENST00000579986 COL16A1Q07092 1604 aaPredicted RBP8.52□□□□□ -1.04
RTTN-204ENST00000579986 MAP3K19Q56UN5 1328 aa8.52□□□□□ -1.05
RTTN-204ENST00000579986 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
RTTN-204ENST00000579986 TRMT2AQ8IZ69 625 aaKnown RBP8.52□□□□□ -1.05
RTTN-204ENST00000579986 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
RTTN-204ENST00000579986 DIAPH1O60610 1272 aaKnown RBP8.52□□□□□ -1.05
RTTN-204ENST00000579986 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
RTTN-204ENST00000579986 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
RTTN-204ENST00000579986 RUNDC1Q96C34 613 aa8.51□□□□□ -1.05
RTTN-204ENST00000579986 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
RTTN-204ENST00000579986 FCHSD2O94868 740 aa8.51□□□□□ -1.05
RTTN-204ENST00000579986 TNNT2P45379 298 aaPredicted RBP8.51□□□□□ -1.05
RTTN-204ENST00000579986 CNGB1Q14028 1251 aaPredicted RBP8.51□□□□□ -1.05
RTTN-204ENST00000579986 ABTB2Q8N961 1025 aa8.51□□□□□ -1.05
RTTN-204ENST00000579986 FOXO3O43524 673 aa8.5□□□□□ -1.05
RTTN-204ENST00000579986 LRRC37A3O60309 1634 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms