RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
SSH2-209ENST00000579954 USP47Q96K76 1375 aa12.78□□□□□ -0.36
SSH2-209ENST00000579954 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.36
SSH2-209ENST00000579954 CRYBG1Q9Y4K1 1723 aa12.77□□□□□ -0.36
SSH2-209ENST00000579954 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
SSH2-209ENST00000579954 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
SSH2-209ENST00000579954 ATAD2Q6PL18 1390 aa12.77□□□□□ -0.37
SSH2-209ENST00000579954 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
SSH2-209ENST00000579954 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
SSH2-209ENST00000579954 USP21Q9UK80 565 aa12.76□□□□□ -0.37
SSH2-209ENST00000579954 PLEKHG3A1L390 1219 aa12.75□□□□□ -0.37
SSH2-209ENST00000579954 ABTB2Q8N961 1025 aa12.75□□□□□ -0.37
SSH2-209ENST00000579954 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
SSH2-209ENST00000579954 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
SSH2-209ENST00000579954 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
SSH2-209ENST00000579954 RXRBP28702 533 aa12.73□□□□□ -0.37
SSH2-209ENST00000579954 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
SSH2-209ENST00000579954 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
SSH2-209ENST00000579954 NWD2Q9ULI1 1742 aa12.73□□□□□ -0.37
SSH2-209ENST00000579954 USP6P35125 1406 aa12.72□□□□□ -0.37
SSH2-209ENST00000579954 ZBTB7CA1YPR0 619 aa12.72□□□□□ -0.37
SSH2-209ENST00000579954 SOCS7O14512 581 aa12.72□□□□□ -0.37
SSH2-209ENST00000579954 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
SSH2-209ENST00000579954 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
SSH2-209ENST00000579954 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
SSH2-209ENST00000579954 KTN1Q86UP2 1357 aaKnown RBP12.71□□□□□ -0.37
SSH2-209ENST00000579954 TMF1P82094 1093 aa12.71□□□□□ -0.37
SSH2-209ENST00000579954 HDGFL2Q7Z4V5 671 aaPredicted RBP12.7□□□□□ -0.38
SSH2-209ENST00000579954 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
SSH2-209ENST00000579954 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
SSH2-209ENST00000579954 NRAPQ86VF7 1730 aa12.7□□□□□ -0.38
SSH2-209ENST00000579954 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
SSH2-209ENST00000579954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.69□□□□□ -0.38
SSH2-209ENST00000579954 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
SSH2-209ENST00000579954 TESK2Q96S53 571 aa12.69□□□□□ -0.38
SSH2-209ENST00000579954 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
SSH2-209ENST00000579954 PRDM11Q9NQV5 511 aa12.69□□□□□ -0.38
SSH2-209ENST00000579954 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 SOX12O15370 315 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 NLRP6P59044 892 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
SSH2-209ENST00000579954 NLRP13Q86W25 1043 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 SLC12A5Q9H2X9 1139 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
SSH2-209ENST00000579954 BRD4O60885 1362 aaPredicted RBP12.68□□□□□ -0.38
SSH2-209ENST00000579954 SLIT2O94813 1529 aa12.67□□□□□ -0.38
SSH2-209ENST00000579954 A0A0G2JS52 829 aa12.67□□□□□ -0.38
SSH2-209ENST00000579954 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
SSH2-209ENST00000579954 MYT1Q01538 1121 aa12.67□□□□□ -0.38
SSH2-209ENST00000579954 ATRNO75882 1429 aa12.67□□□□□ -0.38
SSH2-209ENST00000579954 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
SSH2-209ENST00000579954 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
SSH2-209ENST00000579954 RGS12O14924 1447 aa12.66□□□□□ -0.38
SSH2-209ENST00000579954 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
SSH2-209ENST00000579954 CDCA8Q53HL2 280 aa12.66□□□□□ -0.38
SSH2-209ENST00000579954 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
SSH2-209ENST00000579954 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
SSH2-209ENST00000579954 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
SSH2-209ENST00000579954 CPSF1Q10570 1443 aaKnown RBP12.65□□□□□ -0.38
SSH2-209ENST00000579954 MYOM1P52179 1685 aa12.65□□□□□ -0.38
SSH2-209ENST00000579954 EIF4G2P78344 907 aaKnown RBP eCLIP12.65□□□□□ -0.38
SSH2-209ENST00000579954 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
SSH2-209ENST00000579954 LTN1O94822 1766 aa12.65□□□□□ -0.38
SSH2-209ENST00000579954 NINLQ9Y2I6 1382 aa12.65□□□□□ -0.38
SSH2-209ENST00000579954 CD163L1Q9NR16 1453 aa12.65□□□□□ -0.38
SSH2-209ENST00000579954 CDK12Q9NYV4 1490 aaPredicted RBP12.65□□□□□ -0.38
SSH2-209ENST00000579954 KIF20BQ96Q89 1820 aa12.65□□□□□ -0.39
SSH2-209ENST00000579954 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
SSH2-209ENST00000579954 HSPA5P11021 654 aaKnown RBP12.64□□□□□ -0.39
SSH2-209ENST00000579954 GJD4Q96KN9 370 aaPredicted RBP12.64□□□□□ -0.39
SSH2-209ENST00000579954 GLI3P10071 1580 aa12.64□□□□□ -0.39
SSH2-209ENST00000579954 USP19O94966 1318 aa12.63□□□□□ -0.39
SSH2-209ENST00000579954 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
SSH2-209ENST00000579954 SSH2Q76I76 1423 aa12.63□□□□□ -0.39
SSH2-209ENST00000579954 SLIT3O75094 1523 aa12.63□□□□□ -0.39
SSH2-209ENST00000579954 BRWD3Q6RI45 1802 aa12.63□□□□□ -0.39
SSH2-209ENST00000579954 ADRA2BP18089 450 aa12.63□□□□□ -0.39
SSH2-209ENST00000579954 EVA1CP58658 441 aa12.63□□□□□ -0.39
SSH2-209ENST00000579954 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
SSH2-209ENST00000579954 GCP02774 474 aa12.62□□□□□ -0.39
SSH2-209ENST00000579954 NME9Q86XW9 330 aa12.62□□□□□ -0.39
SSH2-209ENST00000579954 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
SSH2-209ENST00000579954 ANKRD36BQ8N2N9 1353 aa12.61□□□□□ -0.39
SSH2-209ENST00000579954 VPS72Q15906 364 aa12.61□□□□□ -0.39
SSH2-209ENST00000579954 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
SSH2-209ENST00000579954 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
SSH2-209ENST00000579954 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
SSH2-209ENST00000579954 KCNH5Q8NCM2 988 aa12.6□□□□□ -0.39
SSH2-209ENST00000579954 USP35Q9P2H5 1018 aa12.6□□□□□ -0.39
SSH2-209ENST00000579954 CPDO75976 1380 aa12.58□□□□□ -0.4
SSH2-209ENST00000579954 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
SSH2-209ENST00000579954 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
SSH2-209ENST00000579954 NFAT5O94916 1531 aa12.57□□□□□ -0.4
SSH2-209ENST00000579954 COG3Q96JB2 828 aa12.57□□□□□ -0.4
SSH2-209ENST00000579954 COL18A1P39060 1754 aa12.56□□□□□ -0.4
SSH2-209ENST00000579954 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
SSH2-209ENST00000579954 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
SSH2-209ENST00000579954 SPATA31A5Q5VU36 1347 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms