RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 VPS72Q15906 364 aa33.98■■■■□ 3.03
CDKN2A-214ENST00000579755 NBPF8Q3BBV2 869 aa33.98■■■■□ 3.03
CDKN2A-214ENST00000579755 RALGAPBQ86X10 1494 aa33.97■■■■□ 3.03
CDKN2A-214ENST00000579755 PLEKHG3A1L390 1219 aa33.97■■■■□ 3.03
CDKN2A-214ENST00000579755 CABP2Q9NPB3 220 aa33.96■■■■□ 3.03
CDKN2A-214ENST00000579755 ROCK2O75116 1388 aaKnown RBP33.96■■■■□ 3.03
CDKN2A-214ENST00000579755 PLCH1Q4KWH8 1693 aa33.94■■■■□ 3.02
CDKN2A-214ENST00000579755 NWD2Q9ULI1 1742 aa33.94■■■■□ 3.02
CDKN2A-214ENST00000579755 BTG4Q9NY30 223 aa33.94■■■■□ 3.02
CDKN2A-214ENST00000579755 POLR3AO14802 1390 aaPredicted RBP33.93■■■■□ 3.02
CDKN2A-214ENST00000579755 NUTM2GQ5VZR2 741 aa33.92■■■■□ 3.02
CDKN2A-214ENST00000579755 PRDM11Q9NQV5 511 aa33.91■■■■□ 3.02
CDKN2A-214ENST00000579755 QRICH2Q9H0J4 1663 aa33.9■■■■□ 3.02
CDKN2A-214ENST00000579755 TRPM1Q7Z4N2 1603 aa33.9■■■■□ 3.02
CDKN2A-214ENST00000579755 GLI3P10071 1580 aa33.9■■■■□ 3.02
CDKN2A-214ENST00000579755 PPIP5K1Q6PFW1 1433 aa33.89■■■■□ 3.02
CDKN2A-214ENST00000579755 TOPAZ1Q8N9V7 1692 aa33.89■■■■□ 3.02
CDKN2A-214ENST00000579755 EVC2Q86UK5 1308 aa33.88■■■■□ 3.01
CDKN2A-214ENST00000579755 SEPT12Q8IYM1 358 aa33.88■■■■□ 3.01
CDKN2A-214ENST00000579755 ABTB2Q8N961 1025 aa33.88■■■■□ 3.01
CDKN2A-214ENST00000579755 A0A0G2JS52 829 aa33.87■■■■□ 3.01
CDKN2A-214ENST00000579755 MYT1Q01538 1121 aa33.87■■■■□ 3.01
CDKN2A-214ENST00000579755 COL14A1Q05707 1796 aaKnown RBP33.86■■■■□ 3.01
CDKN2A-214ENST00000579755 CCDC125Q86Z20 511 aa33.85■■■■□ 3.01
CDKN2A-214ENST00000579755 TONSLQ96HA7 1378 aa33.85■■■■□ 3.01
CDKN2A-214ENST00000579755 CABP1Q9NZU7 370 aa33.84■■■■□ 3.01
CDKN2A-214ENST00000579755 ZC3H6P61129 1189 aaKnown RBP33.82■■■■□ 3
CDKN2A-214ENST00000579755 ONECUT3O60422 494 aaPredicted RBP33.8■■■■□ 3
CDKN2A-214ENST00000579755 NLRP13Q86W25 1043 aa33.8■■■■□ 3
CDKN2A-214ENST00000579755 KIAA0232Q92628 1395 aa33.8■■■■□ 3
CDKN2A-214ENST00000579755 CRYBG1Q9Y4K1 1723 aa33.79■■■■□ 3
CDKN2A-214ENST00000579755 CHRNA2Q15822 529 aa33.78■■■■□ 3
CDKN2A-214ENST00000579755 FAM98CQ17RN3 349 aaKnown RBP33.78■■■■□ 3
CDKN2A-214ENST00000579755 KRT27Q7Z3Y8 459 aa33.77■■■■□ 3
CDKN2A-214ENST00000579755 CARD11Q9BXL7 1154 aa33.77■■■■□ 3
CDKN2A-214ENST00000579755 NRAPQ86VF7 1730 aa33.76■■■□□ 2.99
CDKN2A-214ENST00000579755 BRD4O60885 1362 aaPredicted RBP33.75■■■□□ 2.99
CDKN2A-214ENST00000579755 EVA1CP58658 441 aa33.74■■■□□ 2.99
CDKN2A-214ENST00000579755 STRN4Q9NRL3 753 aa33.74■■■□□ 2.99
CDKN2A-214ENST00000579755 BRWD3Q6RI45 1802 aa33.74■■■□□ 2.99
CDKN2A-214ENST00000579755 PHRF1Q9P1Y6 1649 aaKnown RBP33.73■■■□□ 2.99
CDKN2A-214ENST00000579755 SF3B2Q13435 895 aaKnown RBP33.73■■■□□ 2.99
CDKN2A-214ENST00000579755 SPATA31A5Q5VU36 1347 aa33.72■■■□□ 2.99
CDKN2A-214ENST00000579755 SPATA31A7Q8IWB4 1347 aa33.72■■■□□ 2.99
CDKN2A-214ENST00000579755 NLRP6P59044 892 aa33.69■■■□□ 2.98
CDKN2A-214ENST00000579755 ZNF692Q9BU19 519 aaPredicted RBP33.69■■■□□ 2.98
CDKN2A-214ENST00000579755 USP6P35125 1406 aa33.69■■■□□ 2.98
CDKN2A-214ENST00000579755 GCP02774 474 aa33.68■■■□□ 2.98
CDKN2A-214ENST00000579755 USP19O94966 1318 aa33.67■■■□□ 2.98
CDKN2A-214ENST00000579755 BLMP54132 1417 aaPredicted RBP33.67■■■□□ 2.98
CDKN2A-214ENST00000579755 ZBTB7CA1YPR0 619 aa33.65■■■□□ 2.98
CDKN2A-214ENST00000579755 USP35Q9P2H5 1018 aa33.63■■■□□ 2.97
CDKN2A-214ENST00000579755 ZRANB1Q9UGI0 708 aa33.63■■■□□ 2.97
CDKN2A-214ENST00000579755 CPDO75976 1380 aa33.62■■■□□ 2.97
CDKN2A-214ENST00000579755 SPATA31A1Q5TZJ5 1347 aa33.62■■■□□ 2.97
CDKN2A-214ENST00000579755 NRKQ7Z2Y5 1582 aa33.61■■■□□ 2.97
CDKN2A-214ENST00000579755 SBNO2Q9Y2G9 1366 aa33.58■■■□□ 2.97
CDKN2A-214ENST00000579755 TTC21BQ7Z4L5 1316 aa33.57■■■□□ 2.97
CDKN2A-214ENST00000579755 TMC1Q8TDI8 760 aa33.56■■■□□ 2.96
CDKN2A-214ENST00000579755 SSH2Q76I76 1423 aa33.55■■■□□ 2.96
CDKN2A-214ENST00000579755 LARP1Q6PKG0 1096 aaKnown RBP33.55■■■□□ 2.96
CDKN2A-214ENST00000579755 KTN1Q86UP2 1357 aaKnown RBP33.55■■■□□ 2.96
CDKN2A-214ENST00000579755 DEFB132Q7Z7B7 95 aa33.54■■■□□ 2.96
CDKN2A-214ENST00000579755 CAMTA1Q9Y6Y1 1673 aa33.54■■■□□ 2.96
CDKN2A-214ENST00000579755 TTC21AQ8NDW8 1320 aa33.53■■■□□ 2.96
CDKN2A-214ENST00000579755 FAM182BQ5T319 152 aa33.52■■■□□ 2.96
CDKN2A-214ENST00000579755 TCP11L2Q8N4U5 519 aa33.51■■■□□ 2.95
CDKN2A-214ENST00000579755 KCNH5Q8NCM2 988 aa33.51■■■□□ 2.95
CDKN2A-214ENST00000579755 EP400Q96L91 3159 aa33.51■■■□□ 2.95
CDKN2A-214ENST00000579755 AKAP12Q02952 1782 aa33.5■■■□□ 2.95
CDKN2A-214ENST00000579755 BAG6P46379 1132 aa33.5■■■□□ 2.95
CDKN2A-214ENST00000579755 BARGINQ6ZT62 677 aa33.5■■■□□ 2.95
CDKN2A-214ENST00000579755 CPSF1Q10570 1443 aaKnown RBP33.49■■■□□ 2.95
CDKN2A-214ENST00000579755 PDE3BQ13370 1112 aa33.49■■■□□ 2.95
CDKN2A-214ENST00000579755 HDGFL2Q7Z4V5 671 aaPredicted RBP33.49■■■□□ 2.95
CDKN2A-214ENST00000579755 THSD7AQ9UPZ6 1657 aa33.48■■■□□ 2.95
CDKN2A-214ENST00000579755 SOX12O15370 315 aa33.48■■■□□ 2.95
CDKN2A-214ENST00000579755 PIK3C2AO00443 1686 aa33.48■■■□□ 2.95
CDKN2A-214ENST00000579755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.47■■■□□ 2.95
CDKN2A-214ENST00000579755 THRAP3Q9Y2W1 955 aaKnown RBP33.47■■■□□ 2.95
CDKN2A-214ENST00000579755 LMO7Q8WWI1 1683 aa33.47■■■□□ 2.95
CDKN2A-214ENST00000579755 SLIT3O75094 1523 aa33.47■■■□□ 2.95
CDKN2A-214ENST00000579755 AATKQ6ZMQ8 1374 aa33.47■■■□□ 2.95
CDKN2A-214ENST00000579755 SLC24A1O60721 1099 aa33.46■■■□□ 2.95
CDKN2A-214ENST00000579755 FAM196AQ6ZSG2 479 aa33.45■■■□□ 2.95
CDKN2A-214ENST00000579755 CLSPNQ9HAW4 1339 aa33.44■■■□□ 2.94
CDKN2A-214ENST00000579755 COL5A2P05997 1499 aaPredicted RBP33.44■■■□□ 2.94
CDKN2A-214ENST00000579755 ST20-MTHFSA0A0A6YYL1 179 aa33.43■■■□□ 2.94
CDKN2A-214ENST00000579755 SLC12A5Q9H2X9 1139 aa33.43■■■□□ 2.94
CDKN2A-214ENST00000579755 TERF2IPQ9NYB0 399 aa33.43■■■□□ 2.94
CDKN2A-214ENST00000579755 TOM1L2Q6ZVM7 507 aa33.42■■■□□ 2.94
CDKN2A-214ENST00000579755 CCER1Q8TC90 406 aaPredicted RBP33.42■■■□□ 2.94
CDKN2A-214ENST00000579755 PUS7Q96PZ0 661 aaKnown RBP33.42■■■□□ 2.94
CDKN2A-214ENST00000579755 CRB1P82279 1406 aa33.4■■■□□ 2.94
CDKN2A-214ENST00000579755 ARHGEF25Q86VW2 580 aa33.39■■■□□ 2.94
CDKN2A-214ENST00000579755 CSB-PGBD3P0DP91 1061 aa33.37■■■□□ 2.93
CDKN2A-214ENST00000579755 MON2Q7Z3U7 1717 aa33.36■■■□□ 2.93
CDKN2A-214ENST00000579755 TRIM37O94972 964 aa33.36■■■□□ 2.93
CDKN2A-214ENST00000579755 EN1Q05925 392 aaPredicted RBP33.36■■■□□ 2.93
CDKN2A-214ENST00000579755 AXIN2Q9Y2T1 843 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms